RNA–Protein interactions for RNA: ENST00000409245.5

TTC7A-203, Transcript of tetratricopeptide repeat domain 7A, humanhuman

TSL 2 BASIC

Gene TTC7A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC7A-203ENST00000409245 MRC1P22897 1456 aa18.23■□□□□ 0.51
TTC7A-203ENST00000409245 PI4KAP2A4QPH2 592 aa18.23■□□□□ 0.51
TTC7A-203ENST00000409245 PI4KAP1Q8N8J0 262 aa18.23■□□□□ 0.51
TTC7A-203ENST00000409245 NFATC2IPQ8NCF5 419 aa18.23■□□□□ 0.51
TTC7A-203ENST00000409245 LRRFIP2Q9Y608 721 aaKnown RBP18.23■□□□□ 0.51
TTC7A-203ENST00000409245 PNMA6EA0A0J9YXQ4 647 aa18.22■□□□□ 0.51
TTC7A-203ENST00000409245 GSPT1P15170 499 aaKnown RBP18.22■□□□□ 0.51
TTC7A-203ENST00000409245 DBF4Q9UBU7 674 aaPredicted RBP18.22■□□□□ 0.51
TTC7A-203ENST00000409245 PLEKHG2Q9H7P9 1386 aa18.22■□□□□ 0.51
TTC7A-203ENST00000409245 ZNF790Q6PG37 636 aa18.22■□□□□ 0.51
TTC7A-203ENST00000409245 WDR17Q8IZU2 1322 aa18.21■□□□□ 0.51
TTC7A-203ENST00000409245 CHMP4AQ9BY43 222 aa18.21■□□□□ 0.51
TTC7A-203ENST00000409245 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
TTC7A-203ENST00000409245 SRCIN1Q9C0H9 1055 aa18.21■□□□□ 0.51
TTC7A-203ENST00000409245 BEND3Q5T5X7 828 aa18.2■□□□□ 0.5
TTC7A-203ENST00000409245 C22orf23Q9BZE7 217 aa18.2■□□□□ 0.5
TTC7A-203ENST00000409245 UBTFL1P0CB47 393 aaPredicted RBP18.2■□□□□ 0.5
TTC7A-203ENST00000409245 ATP8B2P98198 1209 aa18.2■□□□□ 0.5
TTC7A-203ENST00000409245 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
TTC7A-203ENST00000409245 DCAF5Q96JK2 942 aa18.19■□□□□ 0.5
TTC7A-203ENST00000409245 SHANK3Q9BYB0 1731 aa18.19■□□□□ 0.5
TTC7A-203ENST00000409245 TOM1L2Q6ZVM7 507 aa18.19■□□□□ 0.5
TTC7A-203ENST00000409245 TTC22Q5TAA0 569 aa18.18■□□□□ 0.5
TTC7A-203ENST00000409245 TBC1D9Q6ZT07 1266 aa18.18■□□□□ 0.5
TTC7A-203ENST00000409245 NBPF7P0C2Y1 421 aaPredicted RBP18.17■□□□□ 0.5
TTC7A-203ENST00000409245 PDIA6Q15084 440 aa18.17■□□□□ 0.5
TTC7A-203ENST00000409245 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
TTC7A-203ENST00000409245 MAP3K2Q9Y2U5 619 aa18.17■□□□□ 0.5
TTC7A-203ENST00000409245 GLI3P10071 1580 aa18.17■□□□□ 0.5
TTC7A-203ENST00000409245 TUBGCP6Q96RT7 1819 aa18.16■□□□□ 0.5
TTC7A-203ENST00000409245 FAM43AQ8N2R8 423 aa18.16■□□□□ 0.5
TTC7A-203ENST00000409245 DDX21Q9NR30 783 aaKnown RBP eCLIP18.15■□□□□ 0.5
TTC7A-203ENST00000409245 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
TTC7A-203ENST00000409245 IBTKQ9P2D0 1353 aaPredicted RBP18.15■□□□□ 0.5
TTC7A-203ENST00000409245 KSR2Q6VAB6 950 aa18.15■□□□□ 0.5
TTC7A-203ENST00000409245 STRN4Q9NRL3 753 aa18.15■□□□□ 0.5
TTC7A-203ENST00000409245 HSP90AB1P08238 724 aaKnown RBP18.14■□□□□ 0.49
TTC7A-203ENST00000409245 LARP1Q6PKG0 1096 aaKnown RBP18.14■□□□□ 0.49
TTC7A-203ENST00000409245 ROBO1Q9Y6N7 1651 aa18.14■□□□□ 0.49
TTC7A-203ENST00000409245 CDC45O75419 566 aa18.13■□□□□ 0.49
TTC7A-203ENST00000409245 USP35Q9P2H5 1018 aa18.13■□□□□ 0.49
TTC7A-203ENST00000409245 LAMB4A4D0S4 1761 aa18.13■□□□□ 0.49
TTC7A-203ENST00000409245 CABP4P57796 275 aa18.13■□□□□ 0.49
TTC7A-203ENST00000409245 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
TTC7A-203ENST00000409245 ZCRB1Q8TBF4 217 aaKnown RBP18.13■□□□□ 0.49
TTC7A-203ENST00000409245 SSH3Q8TE77 659 aa18.13■□□□□ 0.49
TTC7A-203ENST00000409245 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
TTC7A-203ENST00000409245 PCDH11XQ9BZA7 1347 aa18.13■□□□□ 0.49
TTC7A-203ENST00000409245 PCDH11YQ9BZA8 1340 aa18.13■□□□□ 0.49
TTC7A-203ENST00000409245 BECN1Q14457 450 aa18.12■□□□□ 0.49
TTC7A-203ENST00000409245 PPP1R42Q7Z4L9 355 aa18.12■□□□□ 0.49
TTC7A-203ENST00000409245 LRRCC1Q9C099 1032 aa18.12■□□□□ 0.49
TTC7A-203ENST00000409245 CWF19L2Q2TBE0 894 aaKnown RBP18.12■□□□□ 0.49
TTC7A-203ENST00000409245 TBC1D2Q9BYX2 928 aa18.12■□□□□ 0.49
TTC7A-203ENST00000409245 RRP9O43818 475 aaKnown RBP18.12■□□□□ 0.49
TTC7A-203ENST00000409245 MYL6BP14649 208 aa18.12■□□□□ 0.49
TTC7A-203ENST00000409245 RBM25P49756 843 aaKnown RBP18.12■□□□□ 0.49
TTC7A-203ENST00000409245 GSE1Q14687 1217 aa18.12■□□□□ 0.49
TTC7A-203ENST00000409245 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
TTC7A-203ENST00000409245 USP16Q9Y5T5 823 aa18.12■□□□□ 0.49
TTC7A-203ENST00000409245 UBR2Q8IWV8 1755 aa18.11■□□□□ 0.49
TTC7A-203ENST00000409245 SALL3Q9BXA9 1300 aa18.11■□□□□ 0.49
TTC7A-203ENST00000409245 SDSP20132 328 aa18.11■□□□□ 0.49
TTC7A-203ENST00000409245 POLA2Q14181 598 aa18.11■□□□□ 0.49
TTC7A-203ENST00000409245 TAF7LQ5H9L4 462 aa18.11■□□□□ 0.49
TTC7A-203ENST00000409245 IL2RBP14784 551 aa18.11■□□□□ 0.49
TTC7A-203ENST00000409245 PDE1AP54750 535 aa18.11■□□□□ 0.49
TTC7A-203ENST00000409245 PIP4K2AP48426 406 aaPredicted RBP18.1■□□□□ 0.49
TTC7A-203ENST00000409245 TSHZ3Q63HK5 1081 aa18.1■□□□□ 0.49
TTC7A-203ENST00000409245 OSBPL3Q9H4L5 887 aa18.1■□□□□ 0.49
TTC7A-203ENST00000409245 TOGARAM1Q9Y4F4 1720 aa18.1■□□□□ 0.49
TTC7A-203ENST00000409245 PAPPAQ13219 1627 aa18.1■□□□□ 0.49
TTC7A-203ENST00000409245 ALDH1L1O75891 902 aa18.09■□□□□ 0.49
TTC7A-203ENST00000409245 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
TTC7A-203ENST00000409245 EVA1CP58658 441 aa18.09■□□□□ 0.49
TTC7A-203ENST00000409245 FMNL2Q96PY5 1086 aa18.09■□□□□ 0.49
TTC7A-203ENST00000409245 SRGAP3O43295 1099 aa18.09■□□□□ 0.49
TTC7A-203ENST00000409245 LRP10Q7Z4F1 713 aa18.09■□□□□ 0.49
TTC7A-203ENST00000409245 DDX58O95786 925 aaKnown RBP18.08■□□□□ 0.48
TTC7A-203ENST00000409245 HSP90AA1P07900 732 aaKnown RBP18.08■□□□□ 0.48
TTC7A-203ENST00000409245 XAGE3Q8WTP9 111 aa18.08■□□□□ 0.48
TTC7A-203ENST00000409245 ARFGEF2Q9Y6D5 1785 aa18.07■□□□□ 0.48
TTC7A-203ENST00000409245 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
TTC7A-203ENST00000409245 C9orf78Q9NZ63 289 aaPredicted RBP18.07■□□□□ 0.48
TTC7A-203ENST00000409245 SURF6O75683 361 aaKnown RBP18.07■□□□□ 0.48
TTC7A-203ENST00000409245 COPS6Q7L5N1 327 aa18.07■□□□□ 0.48
TTC7A-203ENST00000409245 LINS1Q8NG48 757 aa18.07■□□□□ 0.48
TTC7A-203ENST00000409245 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
TTC7A-203ENST00000409245 NAP1L5Q96NT1 182 aaPredicted RBP18.07■□□□□ 0.48
TTC7A-203ENST00000409245 KIF2CQ99661 725 aa18.07■□□□□ 0.48
TTC7A-203ENST00000409245 IL1RAPL2Q9NP60 686 aa18.07■□□□□ 0.48
TTC7A-203ENST00000409245 IGKV5-2P06315 115 aa18.06■□□□□ 0.48
TTC7A-203ENST00000409245 NKX1-1Q15270 411 aaPredicted RBP18.06■□□□□ 0.48
TTC7A-203ENST00000409245 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
TTC7A-203ENST00000409245 COL16A1Q07092 1604 aaPredicted RBP18.06■□□□□ 0.48
TTC7A-203ENST00000409245 AHDC1Q5TGY3 1603 aaPredicted RBP18.06■□□□□ 0.48
TTC7A-203ENST00000409245 MX1P20591 662 aa18.06■□□□□ 0.48
TTC7A-203ENST00000409245 COL14A1Q05707 1796 aaKnown RBP18.06■□□□□ 0.48
TTC7A-203ENST00000409245 KCPQ6ZWJ8 1503 aa18.06■□□□□ 0.48
TTC7A-203ENST00000409245 BTG4Q9NY30 223 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms