RNA–Protein interactions for RNA: ENST00000409093.1

LRRTM4-202, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene LRRTM4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-202ENST00000409093 DCTPP1Q9H773 170 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 C5P01031 1676 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 RRP9O43818 475 aaKnown RBP12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 ANXA1P04083 346 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 GNAI2P04899 355 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 GNAI3P08754 354 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 SLC39A6Q13433 755 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 PCDH11XQ9BZA7 1347 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 PCDH11YQ9BZA8 1340 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 AHDC1Q5TGY3 1603 aaPredicted RBP12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 LTBP4Q8N2S1 1624 aa12.45□□□□□ -0.42
LRRTM4-202ENST00000409093 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
LRRTM4-202ENST00000409093 HMMRO75330 724 aa12.44□□□□□ -0.42
LRRTM4-202ENST00000409093 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
LRRTM4-202ENST00000409093 TTC5Q8N0Z6 440 aa12.43□□□□□ -0.42
LRRTM4-202ENST00000409093 ZCRB1Q8TBF4 217 aaKnown RBP12.43□□□□□ -0.42
LRRTM4-202ENST00000409093 ZBTB47Q9UFB7 747 aaPredicted RBP12.43□□□□□ -0.42
LRRTM4-202ENST00000409093 IL2RBP14784 551 aa12.43□□□□□ -0.42
LRRTM4-202ENST00000409093 PI4KAP2A4QPH2 592 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 SEC24BO95487 1268 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 CABP4P57796 275 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 DNAAF4Q8WXU2 420 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 DDRGK1Q96HY6 314 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 SRCIN1Q9C0H9 1055 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 PRDM4Q9UKN5 801 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 SHANK3Q9BYB0 1731 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 COL14A1Q05707 1796 aaKnown RBP12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 COL22A1Q8NFW1 1626 aaPredicted RBP12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 PROSER3Q2NL68 480 aa12.42□□□□□ -0.42
LRRTM4-202ENST00000409093 ADCY9O60503 1353 aa12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 UBTFL1P0CB47 393 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 GTF2E1P29083 439 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 UPF2Q9HAU5 1272 aaKnown RBP12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 BTG4Q9NY30 223 aa12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 ZNF496Q96IT1 587 aaPredicted RBP12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 USP44Q9H0E7 712 aa12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 LRRFIP2Q9Y608 721 aaKnown RBP12.41□□□□□ -0.42
LRRTM4-202ENST00000409093 IPO4Q8TEX9 1081 aaKnown RBP12.4□□□□□ -0.42
LRRTM4-202ENST00000409093 DDX21Q9NR30 783 aaKnown RBP eCLIP12.4□□□□□ -0.42
LRRTM4-202ENST00000409093 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
LRRTM4-202ENST00000409093 APBB1O00213 710 aa12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 BMP2KLQ5H9B9 411 aa12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 BEND3Q5T5X7 828 aa12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 FMNL2Q96PY5 1086 aa12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 LAMB4A4D0S4 1761 aa12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 PHLPP1O60346 1717 aa12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 COL16A1Q07092 1604 aaPredicted RBP12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 KSR2Q6VAB6 950 aa12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 DDX54Q8TDD1 881 aaKnown RBP12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 MAP3K2Q9Y2U5 619 aa12.39□□□□□ -0.43
LRRTM4-202ENST00000409093 DDX58O95786 925 aaKnown RBP12.38□□□□□ -0.43
LRRTM4-202ENST00000409093 SNRPA1P09661 255 aaKnown RBP12.38□□□□□ -0.43
LRRTM4-202ENST00000409093 ERVV-2B6SEH9 535 aa12.38□□□□□ -0.43
LRRTM4-202ENST00000409093 ATP8B2P98198 1209 aa12.38□□□□□ -0.43
LRRTM4-202ENST00000409093 PDIA6Q15084 440 aa12.38□□□□□ -0.43
LRRTM4-202ENST00000409093 FAM43AQ8N2R8 423 aa12.38□□□□□ -0.43
LRRTM4-202ENST00000409093 UBR2Q8IWV8 1755 aa12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 PNMA6EA0A0J9YXQ4 647 aa12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 SMARCA5O60264 1052 aaPredicted RBP12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 GLI3P10071 1580 aa12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 MYL6BP14649 208 aa12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 AIMP1Q12904 312 aaKnown RBP12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 PLEKHM2Q8IWE5 1019 aa12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 EXOC6BQ9Y2D4 811 aa12.37□□□□□ -0.43
LRRTM4-202ENST00000409093 PAPPAQ13219 1627 aa12.36□□□□□ -0.43
LRRTM4-202ENST00000409093 NBPF7P0C2Y1 421 aaPredicted RBP12.36□□□□□ -0.43
LRRTM4-202ENST00000409093 USP16Q9Y5T5 823 aa12.36□□□□□ -0.43
LRRTM4-202ENST00000409093 TOGARAM1Q9Y4F4 1720 aa12.36□□□□□ -0.43
LRRTM4-202ENST00000409093 ALDH1L1O75891 902 aa12.35□□□□□ -0.43
LRRTM4-202ENST00000409093 MFAP1P55081 439 aaKnown RBP12.35□□□□□ -0.43
LRRTM4-202ENST00000409093 C16orf71Q8IYS4 520 aaPredicted RBP12.35□□□□□ -0.43
LRRTM4-202ENST00000409093 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
LRRTM4-202ENST00000409093 PLCH1Q4KWH8 1693 aa12.35□□□□□ -0.43
LRRTM4-202ENST00000409093 RIC3Q7Z5B4 369 aa12.35□□□□□ -0.43
LRRTM4-202ENST00000409093 TBC1D32Q96NH3 1257 aa12.35□□□□□ -0.43
LRRTM4-202ENST00000409093 C9orf78Q9NZ63 289 aaPredicted RBP12.35□□□□□ -0.43
LRRTM4-202ENST00000409093 CWF19L2Q2TBE0 894 aaKnown RBP12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 OTUD7AQ8TE49 926 aaPredicted RBP12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 XAGE3Q8WTP9 111 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 WNK3Q9BYP7 1800 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 IBTKQ9P2D0 1353 aaPredicted RBP12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 TTC22Q5TAA0 569 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 COPS6Q7L5N1 327 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 LINS1Q8NG48 757 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 SSH3Q8TE77 659 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 LRRCC1Q9C099 1032 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 KCPQ6ZWJ8 1503 aa12.34□□□□□ -0.43
LRRTM4-202ENST00000409093 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
LRRTM4-202ENST00000409093 PIP4K2AP48426 406 aaPredicted RBP12.33□□□□□ -0.44
LRRTM4-202ENST00000409093 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
LRRTM4-202ENST00000409093 SRGAP3O43295 1099 aa12.33□□□□□ -0.44
LRRTM4-202ENST00000409093 PIP4K2BP78356 416 aa12.33□□□□□ -0.44
LRRTM4-202ENST00000409093 NEXNQ0ZGT2 675 aa12.33□□□□□ -0.44
LRRTM4-202ENST00000409093 TMOD3Q9NYL9 352 aa12.33□□□□□ -0.44
LRRTM4-202ENST00000409093 DISP2A7MBM2 1401 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms