RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 AKAP4Q5JQC9 854 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 NAP1L1P55209 391 aaKnown RBP5.89□□□□□ -1.47
HDAC9-204ENST00000406451 RTCBQ9Y3I0 505 aaKnown RBP5.89□□□□□ -1.47
HDAC9-204ENST00000406451 PARP3Q9Y6F1 533 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 MAPKBP1O60336 1514 aa5.89□□□□□ -1.47
HDAC9-204ENST00000406451 ARHGEF10O15013 1369 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 C11orf95C9JLR9 678 aaPredicted RBP5.88□□□□□ -1.47
HDAC9-204ENST00000406451 RARSP54136 660 aaKnown RBP5.88□□□□□ -1.47
HDAC9-204ENST00000406451 AEBP1Q8IUX7 1158 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 JAKMIP1Q96N16 626 aaKnown RBP5.88□□□□□ -1.47
HDAC9-204ENST00000406451 FAM83GA6ND36 823 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 GCP02774 474 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 LDHCP07864 332 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 FBLN1P23142 703 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 LDHAL6AQ6ZMR3 332 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 FEZ1Q99689 392 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 NYXQ9GZU5 481 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 MAGEC2Q9UBF1 373 aaPredicted RBP5.88□□□□□ -1.47
HDAC9-204ENST00000406451 ZFYVE9O95405 1425 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 TTF1Q15361 905 aaPredicted RBP5.88□□□□□ -1.47
HDAC9-204ENST00000406451 CCDC96Q2M329 555 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 BOLA2Q9H3K6 86 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 MBIPQ9NS73 344 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 BAG3O95817 575 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 IL16Q14005 1332 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 TNIP1Q15025 636 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 PI4KAP2A4QPH2 592 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 STIM1Q13586 685 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 WDR78Q5VTH9 848 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 PI4KAP1Q8N8J0 262 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 PIBF1Q8WXW3 757 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 PDRG1Q9NUG6 133 aa5.88□□□□□ -1.47
HDAC9-204ENST00000406451 ZCCHC11Q5TAX3 1644 aaKnown RBP5.88□□□□□ -1.47
HDAC9-204ENST00000406451 CCDC184Q52MB2 194 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 ZHX3Q9H4I2 956 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 CEBPZQ03701 1054 aaKnown RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 ZNF444Q8N0Y2 327 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 SIRT1Q96EB6 747 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 PIP4K2AP48426 406 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 EIF4A2Q14240 407 aaKnown RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 ANKRD18AQ8IVF6 992 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 NLRP3Q96P20 1036 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 RNF41Q9H4P4 317 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 CHPF2Q9P2E5 772 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 HLA-DOAP06340 250 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 PUS7Q96PZ0 661 aaKnown RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 SLC39A6Q13433 755 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 ZFYVE27Q5T4F4 411 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 XAGE3Q8WTP9 111 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 RANBP6O60518 1105 aaKnown RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 GSTO1P78417 241 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 UTP14AQ9BVJ6 771 aaKnown RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 NIP7Q9Y221 180 aaKnown RBP eCLIP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 IQCA1Q86XH1 822 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 DCAF5Q96JK2 942 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 ZSCAN31Q96LW9 406 aaPredicted RBP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.87□□□□□ -1.47
HDAC9-204ENST00000406451 SLAIN2Q9P270 581 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 MAP3K5Q99683 1374 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 STK32BQ9NY57 414 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 HDAC9Q9UKV0 1011 aa5.87□□□□□ -1.47
HDAC9-204ENST00000406451 CASTP20810 708 aaKnown RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 ME1P48163 572 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 C16orf71Q8IYS4 520 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 BMP2KQ9NSY1 1161 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 FIBPO43427 364 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 SMARCA5O60264 1052 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 HOMER1Q86YM7 354 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 CUL5Q93034 780 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 CCDC196A0A1B0GTZ2 297 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 ARHGEF5Q12774 1597 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 IP6K1Q92551 441 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 CCDC8Q9H0W5 538 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 TMEM2Q9UHN6 1383 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 SSBP05455 408 aaKnown RBP eCLIP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 SYCP1Q15431 976 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 LARP1BQ659C4 914 aaKnown RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 OGFOD1Q8N543 542 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 CTCFLQ8NI51 663 aaPredicted RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 GNPATO15228 680 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 ANXA1P04083 346 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 ZGPATQ8N5A5 531 aaKnown RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 TPTE2Q6XPS3 522 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 A0A1W2PP64 1363 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 MATR3P43243 847 aaKnown RBP eCLIP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 FILIP1LQ4L180 1135 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 ZNF804AQ7Z570 1209 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 DZIP3Q86Y13 1208 aaKnown RBP5.86□□□□□ -1.47
HDAC9-204ENST00000406451 NFATC2IPQ8NCF5 419 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 ZRANB1Q9UGI0 708 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 HECW2Q9P2P5 1572 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 GCC2Q8IWJ2 1684 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 PAF1Q8N7H5 531 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 PDILTQ8N807 584 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 FAM13BQ9NYF5 915 aa5.86□□□□□ -1.47
HDAC9-204ENST00000406451 COL17A1Q9UMD9 1497 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-204ENST00000406451 LETM1O95202 739 aaPredicted RBP5.85□□□□□ -1.47
HDAC9-204ENST00000406451 MBD3O95983 291 aa5.85□□□□□ -1.47
HDAC9-204ENST00000406451 COPS6Q7L5N1 327 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms