RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 PAPPAQ13219 1627 aa11.2□□□□□ -0.62
BRCC3-205ENST00000399026 PHKG2P15735 406 aa11.19□□□□□ -0.62
BRCC3-205ENST00000399026 TMEM92Q6UXU6 159 aa11.19□□□□□ -0.62
BRCC3-205ENST00000399026 ADAMTS7Q9UKP4 1686 aa11.19□□□□□ -0.62
BRCC3-205ENST00000399026 U2AF1L5P0DN76 240 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-205ENST00000399026 PRIM1P49642 420 aaKnown RBP11.18□□□□□ -0.62
BRCC3-205ENST00000399026 U2AF1Q01081 240 aaKnown RBP eCLIP11.18□□□□□ -0.62
BRCC3-205ENST00000399026 PLEKHO1Q53GL0 409 aaPredicted RBP11.18□□□□□ -0.62
BRCC3-205ENST00000399026 IFNL2Q8IZJ0 200 aa11.18□□□□□ -0.62
BRCC3-205ENST00000399026 CAMKK2Q96RR4 588 aa11.18□□□□□ -0.62
BRCC3-205ENST00000399026 RSPH6AQ9H0K4 717 aa11.18□□□□□ -0.62
BRCC3-205ENST00000399026 C5P01031 1676 aa11.17□□□□□ -0.62
BRCC3-205ENST00000399026 DLG5Q8TDM6 1919 aa11.17□□□□□ -0.62
BRCC3-205ENST00000399026 HOXB3P14651 431 aaPredicted RBP11.17□□□□□ -0.62
BRCC3-205ENST00000399026 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
BRCC3-205ENST00000399026 MARVELD3Q96A59 401 aa11.17□□□□□ -0.62
BRCC3-205ENST00000399026 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
BRCC3-205ENST00000399026 MRC1P22897 1456 aa11.17□□□□□ -0.62
BRCC3-205ENST00000399026 TUBGCP6Q96RT7 1819 aa11.16□□□□□ -0.62
BRCC3-205ENST00000399026 SIPA1L3O60292 1781 aaPredicted RBP11.16□□□□□ -0.62
BRCC3-205ENST00000399026 MTHFSDQ2M296 383 aaKnown RBP11.16□□□□□ -0.62
BRCC3-205ENST00000399026 AMOTQ4VCS5 1084 aa11.16□□□□□ -0.62
BRCC3-205ENST00000399026 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
BRCC3-205ENST00000399026 TAF1LQ8IZX4 1826 aa11.15□□□□□ -0.62
BRCC3-205ENST00000399026 NKX1-1Q15270 411 aaPredicted RBP11.15□□□□□ -0.62
BRCC3-205ENST00000399026 MPRIPQ6WCQ1 1025 aa11.15□□□□□ -0.62
BRCC3-205ENST00000399026 MAP3K5Q99683 1374 aa11.15□□□□□ -0.63
BRCC3-205ENST00000399026 PHACTR3Q96KR7 559 aa11.14□□□□□ -0.63
BRCC3-205ENST00000399026 PALLDQ8WX93 1383 aa11.14□□□□□ -0.63
BRCC3-205ENST00000399026 PSDA5PKW4 1024 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-205ENST00000399026 PLSCR1O15162 318 aa11.13□□□□□ -0.63
BRCC3-205ENST00000399026 ANP32CO43423 234 aa11.13□□□□□ -0.63
BRCC3-205ENST00000399026 KCNQ4P56696 695 aa11.13□□□□□ -0.63
BRCC3-205ENST00000399026 MMRN1Q13201 1228 aa11.13□□□□□ -0.63
BRCC3-205ENST00000399026 TXNRD1Q16881 649 aa11.13□□□□□ -0.63
BRCC3-205ENST00000399026 AKAP4Q5JQC9 854 aa11.13□□□□□ -0.63
BRCC3-205ENST00000399026 DCAF5Q96JK2 942 aa11.13□□□□□ -0.63
BRCC3-205ENST00000399026 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
BRCC3-205ENST00000399026 TMOD3Q9NYL9 352 aa11.13□□□□□ -0.63
BRCC3-205ENST00000399026 TJP1Q07157 1748 aa11.12□□□□□ -0.63
BRCC3-205ENST00000399026 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
BRCC3-205ENST00000399026 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
BRCC3-205ENST00000399026 HS6ST3Q8IZP7 471 aa11.12□□□□□ -0.63
BRCC3-205ENST00000399026 PIGBQ92521 554 aa11.12□□□□□ -0.63
BRCC3-205ENST00000399026 CASZ1Q86V15 1759 aa11.12□□□□□ -0.63
BRCC3-205ENST00000399026 UBR2Q8IWV8 1755 aa11.12□□□□□ -0.63
BRCC3-205ENST00000399026 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
BRCC3-205ENST00000399026 SPNS2Q8IVW8 549 aa11.11□□□□□ -0.63
BRCC3-205ENST00000399026 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
BRCC3-205ENST00000399026 GAS2L2Q8NHY3 880 aa11.11□□□□□ -0.63
BRCC3-205ENST00000399026 C4BP0C0L5 1744 aa11.11□□□□□ -0.63
BRCC3-205ENST00000399026 MAPK8IP3Q9UPT6 1336 aa11.1□□□□□ -0.63
BRCC3-205ENST00000399026 QSER1Q2KHR3 1735 aa11.1□□□□□ -0.63
BRCC3-205ENST00000399026 RNMTO43148 476 aaKnown RBP11.1□□□□□ -0.63
BRCC3-205ENST00000399026 FCHSD2O94868 740 aa11.1□□□□□ -0.63
BRCC3-205ENST00000399026 CABP4P57796 275 aa11.1□□□□□ -0.63
BRCC3-205ENST00000399026 R3HDM1Q15032 1099 aaKnown RBP11.1□□□□□ -0.63
BRCC3-205ENST00000399026 WDR43Q15061 677 aaKnown RBP eCLIP11.1□□□□□ -0.63
BRCC3-205ENST00000399026 LGR6Q9HBX8 967 aa11.1□□□□□ -0.63
BRCC3-205ENST00000399026 LRRC4BQ9NT99 713 aa11.1□□□□□ -0.63
BRCC3-205ENST00000399026 CCNL1Q9UK58 526 aaPredicted RBP11.1□□□□□ -0.63
BRCC3-205ENST00000399026 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
BRCC3-205ENST00000399026 CICQ96RK0 1608 aaPredicted RBP11.09□□□□□ -0.63
BRCC3-205ENST00000399026 ZNF831Q5JPB2 1677 aa11.09□□□□□ -0.63
BRCC3-205ENST00000399026 ERVV-2B6SEH9 535 aa11.09□□□□□ -0.63
BRCC3-205ENST00000399026 ZNF827Q17R98 1081 aa11.09□□□□□ -0.63
BRCC3-205ENST00000399026 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
BRCC3-205ENST00000399026 ASAP1Q9ULH1 1129 aa11.09□□□□□ -0.63
BRCC3-205ENST00000399026 GNAT3A8MTJ3 354 aa11.08□□□□□ -0.64
BRCC3-205ENST00000399026 DOK7Q18PE1 504 aa11.08□□□□□ -0.64
BRCC3-205ENST00000399026 SLC52A2Q9HAB3 445 aa11.08□□□□□ -0.64
BRCC3-205ENST00000399026 MRS2Q9HD23 443 aa11.08□□□□□ -0.64
BRCC3-205ENST00000399026 UBR3Q6ZT12 1888 aa11.08□□□□□ -0.64
BRCC3-205ENST00000399026 KDM3BQ7LBC6 1761 aa11.08□□□□□ -0.64
BRCC3-205ENST00000399026 CEMIPQ8WUJ3 1361 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 PPP1R37O75864 691 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 NEFMP07197 916 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 EMP3P54852 163 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 MCM10Q7L590 875 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 ZNF710Q8N1W2 664 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 NFATC2IPQ8NCF5 419 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 ATG3Q9NT62 314 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 ADAMTS8Q9UP79 889 aa11.07□□□□□ -0.64
BRCC3-205ENST00000399026 LRP5O75197 1615 aa11.06□□□□□ -0.64
BRCC3-205ENST00000399026 NFE2L2Q16236 605 aa11.06□□□□□ -0.64
BRCC3-205ENST00000399026 SLC27A3Q5K4L6 730 aa11.06□□□□□ -0.64
BRCC3-205ENST00000399026 NBPF14Q5TI25 921 aa11.06□□□□□ -0.64
BRCC3-205ENST00000399026 IL17REQ8NFR9 667 aa11.06□□□□□ -0.64
BRCC3-205ENST00000399026 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
BRCC3-205ENST00000399026 STK32BQ9NY57 414 aa11.06□□□□□ -0.64
BRCC3-205ENST00000399026 RRP7AQ9Y3A4 280 aaKnown RBP11.06□□□□□ -0.64
BRCC3-205ENST00000399026 SENP3-EIF4A1A0A087X0R7 540 aa11.05□□□□□ -0.64
BRCC3-205ENST00000399026 LOC102724428A0A0B4J2F2 783 aa11.05□□□□□ -0.64
BRCC3-205ENST00000399026 C4AP0C0L4 1744 aa11.05□□□□□ -0.64
BRCC3-205ENST00000399026 SIK1P57059 783 aa11.05□□□□□ -0.64
BRCC3-205ENST00000399026 TEFQ10587 303 aa11.05□□□□□ -0.64
BRCC3-205ENST00000399026 SLC39A6Q13433 755 aa11.05□□□□□ -0.64
BRCC3-205ENST00000399026 LINC00116Q8NCU8 138 aa11.05□□□□□ -0.64
BRCC3-205ENST00000399026 THUMPD2Q9BTF0 503 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms