RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 AK2P54819 239 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 CAMK4Q16566 473 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 GORABQ5T7V8 394 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 FAM184AQ8NB25 1140 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 BICD2Q8TD16 824 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 NRXN1Q9ULB1 1477 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 ARHGAP31Q2M1Z3 1444 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 ZSCAN31Q96LW9 406 aaPredicted RBP5.9□□□□□ -1.46
SMAD4-202ENST00000398417 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.9□□□□□ -1.46
SMAD4-202ENST00000398417 IQGAP3Q86VI3 1631 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 H3BQV1 296 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 TATP17735 454 aaPredicted RBP5.9□□□□□ -1.46
SMAD4-202ENST00000398417 CSPP1Q1MSJ5 1256 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 IFFO2Q5TF58 517 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 ECHDC1Q9NTX5 307 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 LMTK2Q8IWU2 1503 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 NEO1Q92859 1461 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 KIF24Q5T7B8 1368 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 ANKLE2Q86XL3 938 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 DDX11Q96FC9 970 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 SUCLG2Q96I99 432 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 TMEM63CQ9P1W3 806 aa5.9□□□□□ -1.46
SMAD4-202ENST00000398417 SOS1Q07889 1333 aaPredicted RBP5.9□□□□□ -1.47
SMAD4-202ENST00000398417 ATP5J2-PTCD1G3V325 749 aa5.9□□□□□ -1.47
SMAD4-202ENST00000398417 RNMTO43148 476 aaKnown RBP5.9□□□□□ -1.47
SMAD4-202ENST00000398417 PTCD1O75127 700 aaKnown RBP5.9□□□□□ -1.47
SMAD4-202ENST00000398417 KRT28Q7Z3Y7 464 aa5.9□□□□□ -1.47
SMAD4-202ENST00000398417 SPC24Q8NBT2 197 aa5.9□□□□□ -1.47
SMAD4-202ENST00000398417 TFIP11Q9UBB9 837 aaKnown RBP5.9□□□□□ -1.47
SMAD4-202ENST00000398417 KIAA0232Q92628 1395 aa5.9□□□□□ -1.47
SMAD4-202ENST00000398417 CLASP1Q7Z460 1538 aa5.9□□□□□ -1.47
SMAD4-202ENST00000398417 CHRNA2Q15822 529 aa5.9□□□□□ -1.47
SMAD4-202ENST00000398417 AKAP4Q5JQC9 854 aa5.9□□□□□ -1.47
SMAD4-202ENST00000398417 ERC1Q8IUD2 1116 aa5.9□□□□□ -1.47
SMAD4-202ENST00000398417 LARP1BQ659C4 914 aaKnown RBP5.89□□□□□ -1.47
SMAD4-202ENST00000398417 FAM173BQ6P4H8 233 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 CCDC85AQ96PX6 553 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-202ENST00000398417 TMX4Q9H1E5 349 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-202ENST00000398417 GPT2Q8TD30 523 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 USP44Q9H0E7 712 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 LIMCH1Q9UPQ0 1083 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 GLRX3O76003 335 aaKnown RBP5.89□□□□□ -1.47
SMAD4-202ENST00000398417 DDIT3P35638 169 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 LARGE1O95461 756 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 PTH1RQ03431 593 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 TAF7LQ5H9L4 462 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 MAP3K5Q99683 1374 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 TPM2P07951 284 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 ADGRB3O60242 1522 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 SBNO1A3KN83 1393 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 BRD1O95696 1058 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 NEFHP12036 1026 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 RBM8AQ9Y5S9 174 aaKnown RBP5.89□□□□□ -1.47
SMAD4-202ENST00000398417 CDC42BPAQ5VT25 1732 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 ZSCAN22P10073 491 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-202ENST00000398417 GIMAP6Q6P9H5 292 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 RASEFQ8IZ41 740 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 DBF4Q9UBU7 674 aaPredicted RBP5.89□□□□□ -1.47
SMAD4-202ENST00000398417 ARHGEF40Q8TER5 1519 aa5.89□□□□□ -1.47
SMAD4-202ENST00000398417 IGSF1Q8N6C5 1336 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 A2ML1A8K2U0 1454 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 UQCRHLA0A096LP55 91 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 PHF14O94880 888 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 UQCRHP07919 91 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 CABP4P57796 275 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 WASHC4Q2M389 1173 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 AXDND1Q5T1B0 1012 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-202ENST00000398417 IP6K1Q92551 441 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 ORAI2Q96SN7 254 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 PRM3Q9NNZ6 103 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 PTCH1Q13635 1447 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 ADGBQ8N7X0 1667 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 PROSER3Q2NL68 480 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 RNF20Q5VTR2 975 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 RAB11FIP4Q86YS3 637 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 KCNH5Q8NCM2 988 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 XAGE3Q8WTP9 111 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 ATP6V1DQ9Y5K8 247 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 F13A1P00488 732 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 IL25Q9H293 177 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 ZDHHC9Q9Y397 364 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 ERBB4Q15303 1308 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 STX6O43752 255 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 PSMA5P28066 241 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 BEND3Q5T5X7 828 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 BLOC1S2Q6QNY1 142 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 CABLES1Q8TDN4 633 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 ALDH1L1O75891 902 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 KSR2Q6VAB6 950 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 COPS6Q7L5N1 327 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 LRRC2Q9BYS8 371 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 EFCAB6Q5THR3 1501 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 ARAP3Q8WWN8 1544 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 FAM177BA6PVY3 158 aa5.88□□□□□ -1.47
SMAD4-202ENST00000398417 ZRSR1Q15695 479 aaKnown RBP5.88□□□□□ -1.47
SMAD4-202ENST00000398417 EDC3Q96F86 508 aaKnown RBP5.88□□□□□ -1.47
SMAD4-202ENST00000398417 GUCY1B3Q02153 619 aa5.87□□□□□ -1.47
SMAD4-202ENST00000398417 TOMM22Q9NS69 142 aa5.87□□□□□ -1.47
SMAD4-202ENST00000398417 NDUFB9Q9Y6M9 179 aa5.87□□□□□ -1.47
SMAD4-202ENST00000398417 CCDC129Q6ZRS4 1044 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms