RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 KCNQ3O43525 872 aa18.72■□□□□ 0.59
HDDC2-202ENST00000398153 NEUROD2Q15784 382 aa18.72■□□□□ 0.59
HDDC2-202ENST00000398153 NLGN1Q8N2Q7 840 aa18.72■□□□□ 0.59
HDDC2-202ENST00000398153 TRIM35Q9UPQ4 493 aa18.72■□□□□ 0.59
HDDC2-202ENST00000398153 CALD1Q05682 793 aaKnown RBP18.71■□□□□ 0.59
HDDC2-202ENST00000398153 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
HDDC2-202ENST00000398153 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
HDDC2-202ENST00000398153 APAF1O14727 1248 aa18.7■□□□□ 0.58
HDDC2-202ENST00000398153 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
HDDC2-202ENST00000398153 A0A087WZG4 1122 aa18.69■□□□□ 0.58
HDDC2-202ENST00000398153 IL6STP40189 918 aaPredicted RBP18.69■□□□□ 0.58
HDDC2-202ENST00000398153 EIF4A1P60842 406 aaKnown RBP18.69■□□□□ 0.58
HDDC2-202ENST00000398153 MIS18AQ9NYP9 233 aa18.69■□□□□ 0.58
HDDC2-202ENST00000398153 ZBTB1Q9Y2K1 713 aa18.69■□□□□ 0.58
HDDC2-202ENST00000398153 C4AP0C0L4 1744 aa18.69■□□□□ 0.58
HDDC2-202ENST00000398153 EIF5P55010 431 aaKnown RBP18.68■□□□□ 0.58
HDDC2-202ENST00000398153 TSPYL4Q9UJ04 414 aa18.68■□□□□ 0.58
HDDC2-202ENST00000398153 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
HDDC2-202ENST00000398153 COL15A1P39059 1388 aa18.68■□□□□ 0.58
HDDC2-202ENST00000398153 CHL1O00533 1208 aa18.67■□□□□ 0.58
HDDC2-202ENST00000398153 ZPR1O75312 459 aa18.67■□□□□ 0.58
HDDC2-202ENST00000398153 GIGYF1O75420 1035 aaPredicted RBP18.67■□□□□ 0.58
HDDC2-202ENST00000398153 GYS1P13807 737 aa18.67■□□□□ 0.58
HDDC2-202ENST00000398153 CCDC27Q2M243 656 aa18.67■□□□□ 0.58
HDDC2-202ENST00000398153 SMIM5Q71RC9 77 aa18.67■□□□□ 0.58
HDDC2-202ENST00000398153 NPM2Q86SE8 214 aaKnown RBP18.67■□□□□ 0.58
HDDC2-202ENST00000398153 NARFQ9UHQ1 456 aa18.67■□□□□ 0.58
HDDC2-202ENST00000398153 USP16Q9Y5T5 823 aa18.67■□□□□ 0.58
HDDC2-202ENST00000398153 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
HDDC2-202ENST00000398153 MSL1Q68DK7 614 aa18.66■□□□□ 0.58
HDDC2-202ENST00000398153 NGEFQ8N5V2 710 aa18.66■□□□□ 0.58
HDDC2-202ENST00000398153 CFAP44Q96MT7 982 aa18.66■□□□□ 0.58
HDDC2-202ENST00000398153 FHDC1Q9C0D6 1143 aaPredicted RBP18.66■□□□□ 0.58
HDDC2-202ENST00000398153 SYT17Q9BSW7 474 aa18.65■□□□□ 0.58
HDDC2-202ENST00000398153 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
HDDC2-202ENST00000398153 CCER2I3L3R5 266 aa18.63■□□□□ 0.57
HDDC2-202ENST00000398153 A1BGP04217 495 aa18.63■□□□□ 0.57
HDDC2-202ENST00000398153 CD2APQ9Y5K6 639 aa18.63■□□□□ 0.57
HDDC2-202ENST00000398153 PRAMEF22A3QJZ6 481 aa18.62■□□□□ 0.57
HDDC2-202ENST00000398153 RGL2O15211 777 aa18.62■□□□□ 0.57
HDDC2-202ENST00000398153 MMP10P09238 476 aa18.62■□□□□ 0.57
HDDC2-202ENST00000398153 GNAI1P63096 354 aa18.62■□□□□ 0.57
HDDC2-202ENST00000398153 IFT57Q9NWB7 429 aa18.62■□□□□ 0.57
HDDC2-202ENST00000398153 ERBB4Q15303 1308 aa18.62■□□□□ 0.57
HDDC2-202ENST00000398153 DCAF8L1A6NGE4 600 aa18.61■□□□□ 0.57
HDDC2-202ENST00000398153 ZNF853P0CG23 659 aa18.61■□□□□ 0.57
HDDC2-202ENST00000398153 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
HDDC2-202ENST00000398153 HOXB7P09629 217 aa18.6■□□□□ 0.57
HDDC2-202ENST00000398153 SRP68Q9UHB9 627 aaKnown RBP18.6■□□□□ 0.57
HDDC2-202ENST00000398153 PARP3Q9Y6F1 533 aa18.6■□□□□ 0.57
HDDC2-202ENST00000398153 TM4SF1P30408 202 aa18.59■□□□□ 0.57
HDDC2-202ENST00000398153 FKBP8Q14318 412 aa18.59■□□□□ 0.57
HDDC2-202ENST00000398153 FAM9BQ8IZU0 186 aa18.59■□□□□ 0.57
HDDC2-202ENST00000398153 LAS1LQ9Y4W2 734 aaKnown RBP18.59■□□□□ 0.57
HDDC2-202ENST00000398153 IL16Q14005 1332 aa18.58■□□□□ 0.57
HDDC2-202ENST00000398153 NBPF26B4DH59 902 aa18.58■□□□□ 0.56
HDDC2-202ENST00000398153 NBPF10Q6P3W6 841 aaKnown RBP18.58■□□□□ 0.56
HDDC2-202ENST00000398153 CLEC4GQ6UXB4 293 aa18.58■□□□□ 0.56
HDDC2-202ENST00000398153 WWC1Q8IX03 1113 aa18.58■□□□□ 0.56
HDDC2-202ENST00000398153 NBPF15Q8N660 670 aa18.58■□□□□ 0.56
HDDC2-202ENST00000398153 CHMP4AQ9BY43 222 aa18.58■□□□□ 0.56
HDDC2-202ENST00000398153 DZIP3Q86Y13 1208 aaKnown RBP18.57■□□□□ 0.56
HDDC2-202ENST00000398153 MBIPQ9NS73 344 aa18.57■□□□□ 0.56
HDDC2-202ENST00000398153 ZNF330Q9Y3S2 320 aaPredicted RBP18.57■□□□□ 0.56
HDDC2-202ENST00000398153 SCN7AQ01118 1682 aa18.57■□□□□ 0.56
HDDC2-202ENST00000398153 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
HDDC2-202ENST00000398153 WDR63Q8IWG1 891 aa18.56■□□□□ 0.56
HDDC2-202ENST00000398153 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
HDDC2-202ENST00000398153 TBC1D2BQ9UPU7 963 aa18.56■□□□□ 0.56
HDDC2-202ENST00000398153 CAMTA2O94983 1202 aa18.55■□□□□ 0.56
HDDC2-202ENST00000398153 KLHL34Q8N239 644 aa18.55■□□□□ 0.56
HDDC2-202ENST00000398153 ZNF652Q9Y2D9 606 aa18.55■□□□□ 0.56
HDDC2-202ENST00000398153 KIF13BQ9NQT8 1826 aa18.55■□□□□ 0.56
HDDC2-202ENST00000398153 POLRMTO00411 1230 aaKnown RBP18.54■□□□□ 0.56
HDDC2-202ENST00000398153 TGFB2P61812 414 aa18.54■□□□□ 0.56
HDDC2-202ENST00000398153 BCORQ6W2J9 1755 aa18.54■□□□□ 0.56
HDDC2-202ENST00000398153 ERVV-1B6SEH8 477 aa18.53■□□□□ 0.56
HDDC2-202ENST00000398153 NFIXQ14938 502 aa18.53■□□□□ 0.56
HDDC2-202ENST00000398153 C10orf71Q711Q0 1435 aa18.52■□□□□ 0.56
HDDC2-202ENST00000398153 EIF2S2P20042 333 aaKnown RBP18.52■□□□□ 0.56
HDDC2-202ENST00000398153 PIP4K2AP48426 406 aaPredicted RBP18.52■□□□□ 0.56
HDDC2-202ENST00000398153 DDR1Q08345 913 aa18.52■□□□□ 0.56
HDDC2-202ENST00000398153 PDIA6Q15084 440 aa18.51■□□□□ 0.55
HDDC2-202ENST00000398153 NLGN2Q8NFZ4 835 aa18.51■□□□□ 0.55
HDDC2-202ENST00000398153 SETDB2Q96T68 719 aa18.51■□□□□ 0.55
HDDC2-202ENST00000398153 CARMIL3Q8ND23 1372 aa18.51■□□□□ 0.55
HDDC2-202ENST00000398153 NRXN2Q9P2S2 1712 aa18.51■□□□□ 0.55
HDDC2-202ENST00000398153 SERPINB2P05120 415 aa18.5■□□□□ 0.55
HDDC2-202ENST00000398153 MYL6BP14649 208 aa18.5■□□□□ 0.55
HDDC2-202ENST00000398153 HDGFL1Q5TGJ6 251 aa18.5■□□□□ 0.55
HDDC2-202ENST00000398153 DUSP27Q5VZP5 1158 aa18.5■□□□□ 0.55
HDDC2-202ENST00000398153 TBC1D9BQ66K14 1250 aa18.5■□□□□ 0.55
HDDC2-202ENST00000398153 KIF6Q6ZMV9 814 aa18.5■□□□□ 0.55
HDDC2-202ENST00000398153 DDX21Q9NR30 783 aaKnown RBP eCLIP18.5■□□□□ 0.55
HDDC2-202ENST00000398153 DBF4Q9UBU7 674 aaPredicted RBP18.5■□□□□ 0.55
HDDC2-202ENST00000398153 LRP10Q7Z4F1 713 aa18.49■□□□□ 0.55
HDDC2-202ENST00000398153 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
HDDC2-202ENST00000398153 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
HDDC2-202ENST00000398153 PDZRN3Q9UPQ7 1066 aa18.48■□□□□ 0.55
HDDC2-202ENST00000398153 AFDNP55196 1824 aaKnown RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms