RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 FHDC1Q9C0D6 1143 aaPredicted RBP24.63■■□□□ 1.53
COLCA2-201ENST00000398035 SOS1Q07889 1333 aaPredicted RBP24.62■■□□□ 1.53
COLCA2-201ENST00000398035 APAF1O14727 1248 aa24.62■■□□□ 1.53
COLCA2-201ENST00000398035 CANXP27824 592 aaKnown RBP24.62■■□□□ 1.53
COLCA2-201ENST00000398035 CALD1Q05682 793 aaKnown RBP24.62■■□□□ 1.53
COLCA2-201ENST00000398035 TSPYL4Q9UJ04 414 aa24.62■■□□□ 1.53
COLCA2-201ENST00000398035 TRIM35Q9UPQ4 493 aa24.62■■□□□ 1.53
COLCA2-201ENST00000398035 ZBTB1Q9Y2K1 713 aa24.62■■□□□ 1.53
COLCA2-201ENST00000398035 IL6STP40189 918 aaPredicted RBP24.61■■□□□ 1.53
COLCA2-201ENST00000398035 EIF4A1P60842 406 aaKnown RBP24.61■■□□□ 1.53
COLCA2-201ENST00000398035 USP16Q9Y5T5 823 aa24.61■■□□□ 1.53
COLCA2-201ENST00000398035 GYS1P13807 737 aa24.61■■□□□ 1.53
COLCA2-201ENST00000398035 CICQ96RK0 1608 aaPredicted RBP24.6■■□□□ 1.53
COLCA2-201ENST00000398035 EIF5P55010 431 aaKnown RBP24.6■■□□□ 1.53
COLCA2-201ENST00000398035 USP42Q9H9J4 1324 aaKnown RBP24.59■■□□□ 1.53
COLCA2-201ENST00000398035 NCBP3Q53F19 620 aaKnown RBP24.59■■□□□ 1.53
COLCA2-201ENST00000398035 NARFQ9UHQ1 456 aa24.59■■□□□ 1.53
COLCA2-201ENST00000398035 CHL1O00533 1208 aa24.58■■□□□ 1.53
COLCA2-201ENST00000398035 GIGYF1O75420 1035 aaPredicted RBP24.58■■□□□ 1.53
COLCA2-201ENST00000398035 A1BGP04217 495 aa24.57■■□□□ 1.52
COLCA2-201ENST00000398035 CD2APQ9Y5K6 639 aa24.57■■□□□ 1.52
COLCA2-201ENST00000398035 MMP10P09238 476 aa24.56■■□□□ 1.52
COLCA2-201ENST00000398035 CFAP44Q96MT7 982 aa24.56■■□□□ 1.52
COLCA2-201ENST00000398035 COL15A1P39059 1388 aa24.56■■□□□ 1.52
COLCA2-201ENST00000398035 UBR3Q6ZT12 1888 aa24.55■■□□□ 1.52
COLCA2-201ENST00000398035 SIPA1L3O60292 1781 aaPredicted RBP24.54■■□□□ 1.52
COLCA2-201ENST00000398035 USPL1Q5W0Q7 1092 aa24.54■■□□□ 1.52
COLCA2-201ENST00000398035 KLHL34Q8N239 644 aa24.54■■□□□ 1.52
COLCA2-201ENST00000398035 SRP68Q9UHB9 627 aaKnown RBP24.54■■□□□ 1.52
COLCA2-201ENST00000398035 PARP3Q9Y6F1 533 aa24.54■■□□□ 1.52
COLCA2-201ENST00000398035 COL5A3P25940 1745 aaPredicted RBP24.54■■□□□ 1.52
COLCA2-201ENST00000398035 TJP1Q07157 1748 aa24.54■■□□□ 1.52
COLCA2-201ENST00000398035 PRAMEF22A3QJZ6 481 aa24.53■■□□□ 1.52
COLCA2-201ENST00000398035 CCDC27Q2M243 656 aa24.53■■□□□ 1.52
COLCA2-201ENST00000398035 LAS1LQ9Y4W2 734 aaKnown RBP24.53■■□□□ 1.52
COLCA2-201ENST00000398035 UBR2Q8IWV8 1755 aa24.53■■□□□ 1.52
COLCA2-201ENST00000398035 FKBP8Q14318 412 aa24.52■■□□□ 1.52
COLCA2-201ENST00000398035 ZNF330Q9Y3S2 320 aaPredicted RBP24.52■■□□□ 1.52
COLCA2-201ENST00000398035 TUBGCP6Q96RT7 1819 aa24.52■■□□□ 1.52
COLCA2-201ENST00000398035 GNAI1P63096 354 aa24.52■■□□□ 1.52
COLCA2-201ENST00000398035 NGEFQ8N5V2 710 aa24.51■■□□□ 1.51
COLCA2-201ENST00000398035 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
COLCA2-201ENST00000398035 TM4SF1P30408 202 aa24.5■■□□□ 1.51
COLCA2-201ENST00000398035 FAM9BQ8IZU0 186 aa24.5■■□□□ 1.51
COLCA2-201ENST00000398035 RGL2O15211 777 aa24.49■■□□□ 1.51
COLCA2-201ENST00000398035 TBC1D2BQ9UPU7 963 aa24.49■■□□□ 1.51
COLCA2-201ENST00000398035 ERBB4Q15303 1308 aa24.49■■□□□ 1.51
COLCA2-201ENST00000398035 VIRMAQ69YN4 1812 aaKnown RBP24.48■■□□□ 1.51
COLCA2-201ENST00000398035 DZIP3Q86Y13 1208 aaKnown RBP24.48■■□□□ 1.51
COLCA2-201ENST00000398035 MYH14Q7Z406 1995 aaKnown RBP24.48■■□□□ 1.51
COLCA2-201ENST00000398035 ZNF853P0CG23 659 aa24.47■■□□□ 1.51
COLCA2-201ENST00000398035 CLEC4GQ6UXB4 293 aa24.47■■□□□ 1.51
COLCA2-201ENST00000398035 COL24A1Q17RW2 1714 aa24.47■■□□□ 1.51
COLCA2-201ENST00000398035 NBPF26B4DH59 902 aa24.46■■□□□ 1.51
COLCA2-201ENST00000398035 CCER2I3L3R5 266 aa24.46■■□□□ 1.51
COLCA2-201ENST00000398035 HOXB7P09629 217 aa24.46■■□□□ 1.51
COLCA2-201ENST00000398035 NBPF10Q6P3W6 841 aaKnown RBP24.46■■□□□ 1.51
COLCA2-201ENST00000398035 NBPF15Q8N660 670 aa24.46■■□□□ 1.51
COLCA2-201ENST00000398035 CHMP4AQ9BY43 222 aa24.46■■□□□ 1.51
COLCA2-201ENST00000398035 TGFB2P61812 414 aa24.45■■□□□ 1.51
COLCA2-201ENST00000398035 WWC1Q8IX03 1113 aa24.45■■□□□ 1.51
COLCA2-201ENST00000398035 BCL2L12Q9HB09 334 aa24.45■■□□□ 1.51
COLCA2-201ENST00000398035 ZNF652Q9Y2D9 606 aa24.45■■□□□ 1.51
COLCA2-201ENST00000398035 DLG5Q8TDM6 1919 aa24.45■■□□□ 1.5
COLCA2-201ENST00000398035 CAMTA2O94983 1202 aa24.44■■□□□ 1.5
COLCA2-201ENST00000398035 EIF2S2P20042 333 aaKnown RBP24.44■■□□□ 1.5
COLCA2-201ENST00000398035 PIP4K2AP48426 406 aaPredicted RBP24.44■■□□□ 1.5
COLCA2-201ENST00000398035 NFIXQ14938 502 aa24.44■■□□□ 1.5
COLCA2-201ENST00000398035 MBIPQ9NS73 344 aa24.44■■□□□ 1.5
COLCA2-201ENST00000398035 POLRMTO00411 1230 aaKnown RBP24.43■■□□□ 1.5
COLCA2-201ENST00000398035 NLGN2Q8NFZ4 835 aa24.43■■□□□ 1.5
COLCA2-201ENST00000398035 GPR162Q16538 588 aa24.42■■□□□ 1.5
COLCA2-201ENST00000398035 IL16Q14005 1332 aa24.42■■□□□ 1.5
COLCA2-201ENST00000398035 ERVV-1B6SEH8 477 aa24.41■■□□□ 1.5
COLCA2-201ENST00000398035 DDR1Q08345 913 aa24.41■■□□□ 1.5
COLCA2-201ENST00000398035 WDR63Q8IWG1 891 aa24.41■■□□□ 1.5
COLCA2-201ENST00000398035 SETDB2Q96T68 719 aa24.41■■□□□ 1.5
COLCA2-201ENST00000398035 SERPINB2P05120 415 aa24.4■■□□□ 1.5
COLCA2-201ENST00000398035 MYL6BP14649 208 aa24.4■■□□□ 1.5
COLCA2-201ENST00000398035 DIEXFQ68CQ4 756 aaKnown RBP24.4■■□□□ 1.5
COLCA2-201ENST00000398035 KIF6Q6ZMV9 814 aa24.39■■□□□ 1.5
COLCA2-201ENST00000398035 DUSP27Q5VZP5 1158 aa24.38■■□□□ 1.49
COLCA2-201ENST00000398035 TBC1D9BQ66K14 1250 aa24.38■■□□□ 1.49
COLCA2-201ENST00000398035 BICDL1Q6ZP65 573 aa24.38■■□□□ 1.49
COLCA2-201ENST00000398035 GRIN3BO60391 1043 aa24.37■■□□□ 1.49
COLCA2-201ENST00000398035 KDM3BQ7LBC6 1761 aa24.37■■□□□ 1.49
COLCA2-201ENST00000398035 PDIA6Q15084 440 aa24.36■■□□□ 1.49
COLCA2-201ENST00000398035 HDGFL1Q5TGJ6 251 aa24.36■■□□□ 1.49
COLCA2-201ENST00000398035 DDX21Q9NR30 783 aaKnown RBP eCLIP24.36■■□□□ 1.49
COLCA2-201ENST00000398035 DBF4Q9UBU7 674 aaPredicted RBP24.35■■□□□ 1.49
COLCA2-201ENST00000398035 KRT24Q2M2I5 525 aa24.35■■□□□ 1.49
COLCA2-201ENST00000398035 PELP1Q8IZL8 1130 aaKnown RBP24.35■■□□□ 1.49
COLCA2-201ENST00000398035 CARMIL3Q8ND23 1372 aa24.34■■□□□ 1.49
COLCA2-201ENST00000398035 MAP3K15Q6ZN16 1313 aa24.34■■□□□ 1.49
COLCA2-201ENST00000398035 C10orf71Q711Q0 1435 aa24.34■■□□□ 1.49
COLCA2-201ENST00000398035 PDZRN3Q9UPQ7 1066 aa24.34■■□□□ 1.49
COLCA2-201ENST00000398035 SALL2Q9Y467 1007 aaPredicted RBP24.34■■□□□ 1.49
COLCA2-201ENST00000398035 NPHP1O15259 732 aa24.33■■□□□ 1.49
COLCA2-201ENST00000398035 C4AP0C0L4 1744 aa24.32■■□□□ 1.48
COLCA2-201ENST00000398035 TPTE2Q6XPS3 522 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms