RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 POLRMTO00411 1230 aaKnown RBP19.17■□□□□ 0.66
SNRNP25-203ENST00000397876 ARHGAP27Q6ZUM4 889 aa19.17■□□□□ 0.66
SNRNP25-203ENST00000397876 PIM2Q9P1W9 311 aa19.17■□□□□ 0.66
SNRNP25-203ENST00000397876 NARFQ9UHQ1 456 aa19.17■□□□□ 0.66
SNRNP25-203ENST00000397876 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
SNRNP25-203ENST00000397876 TM4SF1P30408 202 aa19.16■□□□□ 0.66
SNRNP25-203ENST00000397876 SIPA1L3O60292 1781 aaPredicted RBP19.15■□□□□ 0.66
SNRNP25-203ENST00000397876 STARD3NLO95772 234 aa19.15■□□□□ 0.66
SNRNP25-203ENST00000397876 KCNA3P22001 575 aa19.15■□□□□ 0.66
SNRNP25-203ENST00000397876 IL17REQ8NFR9 667 aa19.15■□□□□ 0.66
SNRNP25-203ENST00000397876 NUDCQ9Y266 331 aa19.15■□□□□ 0.66
SNRNP25-203ENST00000397876 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.65
SNRNP25-203ENST00000397876 PRKAR2BP31323 418 aa19.14■□□□□ 0.65
SNRNP25-203ENST00000397876 DALRD3Q5D0E6 543 aaKnown RBP19.14■□□□□ 0.65
SNRNP25-203ENST00000397876 ZNF790Q6PG37 636 aa19.14■□□□□ 0.65
SNRNP25-203ENST00000397876 NFIXQ14938 502 aa19.13■□□□□ 0.65
SNRNP25-203ENST00000397876 ZNF496Q96IT1 587 aaPredicted RBP19.13■□□□□ 0.65
SNRNP25-203ENST00000397876 RSPH6AQ9H0K4 717 aa19.13■□□□□ 0.65
SNRNP25-203ENST00000397876 HEG1Q9ULI3 1381 aa19.13■□□□□ 0.65
SNRNP25-203ENST00000397876 CEMIPQ8WUJ3 1361 aa19.12■□□□□ 0.65
SNRNP25-203ENST00000397876 A0A087WZG4 1122 aa19.12■□□□□ 0.65
SNRNP25-203ENST00000397876 CHRNA5P30532 468 aa19.12■□□□□ 0.65
SNRNP25-203ENST00000397876 TEX13AQ9BXU3 409 aaPredicted RBP19.12■□□□□ 0.65
SNRNP25-203ENST00000397876 AFDNP55196 1824 aaKnown RBP19.11■□□□□ 0.65
SNRNP25-203ENST00000397876 NRXN2Q9P2S2 1712 aa19.11■□□□□ 0.65
SNRNP25-203ENST00000397876 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
SNRNP25-203ENST00000397876 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
SNRNP25-203ENST00000397876 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
SNRNP25-203ENST00000397876 PHACTR3Q96KR7 559 aa19.1■□□□□ 0.65
SNRNP25-203ENST00000397876 FMNL2Q96PY5 1086 aa19.1■□□□□ 0.65
SNRNP25-203ENST00000397876 BCL2L12Q9HB09 334 aa19.1■□□□□ 0.65
SNRNP25-203ENST00000397876 SCN7AQ01118 1682 aa19.1■□□□□ 0.65
SNRNP25-203ENST00000397876 KIF3CO14782 793 aa19.09■□□□□ 0.65
SNRNP25-203ENST00000397876 SERPINB2P05120 415 aa19.09■□□□□ 0.65
SNRNP25-203ENST00000397876 EIF5P55010 431 aaKnown RBP19.09■□□□□ 0.65
SNRNP25-203ENST00000397876 BTBD11A6QL63 1104 aa19.08■□□□□ 0.64
SNRNP25-203ENST00000397876 C9orf131Q5VYM1 1079 aa19.08■□□□□ 0.64
SNRNP25-203ENST00000397876 ZNF330Q9Y3S2 320 aaPredicted RBP19.08■□□□□ 0.64
SNRNP25-203ENST00000397876 DLEC1Q9Y238 1755 aa19.07■□□□□ 0.64
SNRNP25-203ENST00000397876 HSPA6P17066 643 aa19.07■□□□□ 0.64
SNRNP25-203ENST00000397876 NPM2Q86SE8 214 aaKnown RBP19.07■□□□□ 0.64
SNRNP25-203ENST00000397876 RTF1Q92541 710 aaKnown RBP19.07■□□□□ 0.64
SNRNP25-203ENST00000397876 IL6STP40189 918 aaPredicted RBP19.06■□□□□ 0.64
SNRNP25-203ENST00000397876 BICDL1Q6ZP65 573 aa19.06■□□□□ 0.64
SNRNP25-203ENST00000397876 RNF181Q9P0P0 153 aa19.05■□□□□ 0.64
SNRNP25-203ENST00000397876 CARMIL3Q8ND23 1372 aa19.04■□□□□ 0.64
SNRNP25-203ENST00000397876 KCNQ3O43525 872 aa19.03■□□□□ 0.64
SNRNP25-203ENST00000397876 TBC1D9BQ66K14 1250 aa19.03■□□□□ 0.64
SNRNP25-203ENST00000397876 C2CD5Q86YS7 1000 aa19.03■□□□□ 0.64
SNRNP25-203ENST00000397876 TBC1D2BQ9UPU7 963 aa19.03■□□□□ 0.64
SNRNP25-203ENST00000397876 H0YIN7 160 aa19.02■□□□□ 0.64
SNRNP25-203ENST00000397876 TOMM70O94826 608 aa19.02■□□□□ 0.64
SNRNP25-203ENST00000397876 A1BGP04217 495 aa19.02■□□□□ 0.64
SNRNP25-203ENST00000397876 MCM10Q7L590 875 aa19.02■□□□□ 0.64
SNRNP25-203ENST00000397876 TTLL6Q8N841 843 aa19.02■□□□□ 0.64
SNRNP25-203ENST00000397876 NMRK2Q9NPI5 230 aa19.02■□□□□ 0.64
SNRNP25-203ENST00000397876 KDM2BQ8NHM5 1336 aa19.01■□□□□ 0.63
SNRNP25-203ENST00000397876 BCORQ6W2J9 1755 aa19.01■□□□□ 0.63
SNRNP25-203ENST00000397876 CEP350Q5VT06 3117 aa19.01■□□□□ 0.63
SNRNP25-203ENST00000397876 HTATSF1O43719 755 aaKnown RBP19.01■□□□□ 0.63
SNRNP25-203ENST00000397876 NEFMP07197 916 aa19■□□□□ 0.63
SNRNP25-203ENST00000397876 PDZRN3Q9UPQ7 1066 aa19■□□□□ 0.63
SNRNP25-203ENST00000397876 SBF1O95248 1867 aa19■□□□□ 0.63
SNRNP25-203ENST00000397876 ANKRD31Q8N7Z5 1873 aa18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 CAMTA2O94983 1202 aa18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 SNRPA1P09661 255 aaKnown RBP18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 PDE6BP35913 854 aa18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 RASSF7Q02833 373 aa18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 PRR5LQ6MZQ0 368 aa18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 DZIP3Q86Y13 1208 aaKnown RBP18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 C16orf71Q8IYS4 520 aaPredicted RBP18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 ZC3H4Q9UPT8 1303 aaKnown RBP18.99■□□□□ 0.63
SNRNP25-203ENST00000397876 NPHP1O15259 732 aa18.98■□□□□ 0.63
SNRNP25-203ENST00000397876 DCTN1Q14203 1278 aa18.98■□□□□ 0.63
SNRNP25-203ENST00000397876 CNBD1Q8NA66 436 aa18.98■□□□□ 0.63
SNRNP25-203ENST00000397876 SETDB2Q96T68 719 aa18.98■□□□□ 0.63
SNRNP25-203ENST00000397876 BRIP1Q9BX63 1249 aa18.98■□□□□ 0.63
SNRNP25-203ENST00000397876 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
SNRNP25-203ENST00000397876 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
SNRNP25-203ENST00000397876 LMNB1P20700 586 aa18.97■□□□□ 0.63
SNRNP25-203ENST00000397876 COL11A2P13942 1736 aaPredicted RBP18.97■□□□□ 0.63
SNRNP25-203ENST00000397876 PRAMEF22A3QJZ6 481 aa18.96■□□□□ 0.63
SNRNP25-203ENST00000397876 PIP4K2AP48426 406 aaPredicted RBP18.96■□□□□ 0.63
SNRNP25-203ENST00000397876 ST5P78524 1137 aa18.96■□□□□ 0.63
SNRNP25-203ENST00000397876 RBM46Q8TBY0 533 aaKnown RBP18.96■□□□□ 0.63
SNRNP25-203ENST00000397876 ZNF622Q969S3 477 aaKnown RBP eCLIP18.96■□□□□ 0.633e-8■□□□□ 9.2
SNRNP25-203ENST00000397876 ZNF652Q9Y2D9 606 aa18.96■□□□□ 0.63
SNRNP25-203ENST00000397876 APLP1P51693 650 aa18.95■□□□□ 0.62
SNRNP25-203ENST00000397876 TAF7Q15545 349 aaPredicted RBP18.95■□□□□ 0.62
SNRNP25-203ENST00000397876 CCDC24Q8N4L8 307 aa18.95■□□□□ 0.62
SNRNP25-203ENST00000397876 TIAM2Q8IVF5 1701 aa18.94■□□□□ 0.62
SNRNP25-203ENST00000397876 LAMB4A4D0S4 1761 aa18.94■□□□□ 0.62
SNRNP25-203ENST00000397876 NFKBIEO00221 500 aa18.93■□□□□ 0.62
SNRNP25-203ENST00000397876 CLEC4GQ6UXB4 293 aa18.93■□□□□ 0.62
SNRNP25-203ENST00000397876 DLG5Q8TDM6 1919 aa18.93■□□□□ 0.62
SNRNP25-203ENST00000397876 PNISRQ8TF01 805 aaKnown RBP18.92■□□□□ 0.62
SNRNP25-203ENST00000397876 RRAGCQ9HB90 399 aa18.92■□□□□ 0.62
SNRNP25-203ENST00000397876 KDM3BQ7LBC6 1761 aa18.91■□□□□ 0.62
SNRNP25-203ENST00000397876 RGL2O15211 777 aa18.91■□□□□ 0.62
SNRNP25-203ENST00000397876 NBPF5PQ86XG9 351 aaPredicted RBP18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms