RNA–Protein interactions for RNA: ENST00000397412.7

CRAMP1-202, Transcript of cramped chromatin regulator homolog 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CRAMP1, Length 7,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-202ENST00000397412 CCDC174Q6PII3 467 aa18.95■□□□□ 0.62
CRAMP1-202ENST00000397412 CCDC63Q8NA47 563 aa18.94■□□□□ 0.62
CRAMP1-202ENST00000397412 CCT4P50991 539 aaKnown RBP18.94■□□□□ 0.62
CRAMP1-202ENST00000397412 CTCFLQ8NI51 663 aaPredicted RBP18.94■□□□□ 0.62
CRAMP1-202ENST00000397412 CPLX3Q8WVH0 158 aa18.94■□□□□ 0.62
CRAMP1-202ENST00000397412 CCDC160A6NGH7 325 aa18.94■□□□□ 0.62
CRAMP1-202ENST00000397412 IFIT1P09914 478 aaKnown RBP18.94■□□□□ 0.62
CRAMP1-202ENST00000397412 HMGB2P26583 209 aaKnown RBP18.94■□□□□ 0.62
CRAMP1-202ENST00000397412 IL1RAPL2Q9NP60 686 aa18.93■□□□□ 0.62
CRAMP1-202ENST00000397412 IQCA1Q86XH1 822 aa18.93■□□□□ 0.62
CRAMP1-202ENST00000397412 ALS2CR12Q96Q35 445 aa18.93■□□□□ 0.62
CRAMP1-202ENST00000397412 SRCIN1Q9C0H9 1055 aa18.93■□□□□ 0.62
CRAMP1-202ENST00000397412 CABP5Q9NP86 173 aa18.93■□□□□ 0.62
CRAMP1-202ENST00000397412 WDR33Q9C0J8 1336 aaKnown RBP18.93■□□□□ 0.62
CRAMP1-202ENST00000397412 KIF5CO60282 957 aa18.93■□□□□ 0.62
CRAMP1-202ENST00000397412 NUP62CLQ9H1M0 184 aa18.93■□□□□ 0.62
CRAMP1-202ENST00000397412 SNX16P57768 344 aa18.92■□□□□ 0.62
CRAMP1-202ENST00000397412 HAUS7Q99871 368 aa18.92■□□□□ 0.62
CRAMP1-202ENST00000397412 TPD52P55327 224 aaPredicted RBP18.92■□□□□ 0.62
CRAMP1-202ENST00000397412 NCBP1Q09161 790 aaKnown RBP18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 MAP9Q49MG5 647 aa18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 MTIF2P46199 727 aaKnown RBP18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 CCDC117Q8IWD4 279 aaPredicted RBP18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 TSR2Q969E8 191 aaKnown RBP18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 A0A087WZG4 1122 aa18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 CALML4Q96GE6 196 aa18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 SRRTQ9BXP5 876 aaKnown RBP18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 TTC36A6NLP5 189 aa18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 SLC12A7Q9Y666 1083 aa18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 TTC21AQ8NDW8 1320 aa18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 F8W031 263 aaPredicted RBP18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 ATF7IPQ6VMQ6 1270 aa18.91■□□□□ 0.62
CRAMP1-202ENST00000397412 STX6O43752 255 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 SSRP1Q08945 709 aaKnown RBP18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 MAP7D1Q3KQU3 841 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 RBM26Q5T8P6 1007 aaKnown RBP18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 CDK19Q9BWU1 502 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 RFC4P35249 363 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 GJC1P36383 396 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 SMC1BQ8NDV3 1235 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 AKAP2Q9Y2D5 859 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 SATB1Q01826 763 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 EXOSC9Q06265 439 aaKnown RBP18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 KIF4BQ2VIQ3 1234 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 CCDC40Q4G0X9 1142 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 BBXQ8WY36 941 aaPredicted RBP18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 SLC5A1P13866 664 aa18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 PNISRQ8TF01 805 aaKnown RBP18.9■□□□□ 0.62
CRAMP1-202ENST00000397412 RRS1Q15050 365 aaKnown RBP18.89■□□□□ 0.62
CRAMP1-202ENST00000397412 CATIPQ7Z7H3 387 aa18.89■□□□□ 0.62
CRAMP1-202ENST00000397412 USO1O60763 962 aaKnown RBP18.89■□□□□ 0.62
CRAMP1-202ENST00000397412 AKNAD1Q5T1N1 836 aa18.89■□□□□ 0.62
CRAMP1-202ENST00000397412 MIS18AQ9NYP9 233 aa18.89■□□□□ 0.62
CRAMP1-202ENST00000397412 PAFAH1B1P43034 410 aa18.89■□□□□ 0.61
CRAMP1-202ENST00000397412 C6orf163Q5TEZ5 329 aa18.89■□□□□ 0.61
CRAMP1-202ENST00000397412 NUTM1Q86Y26 1132 aa18.89■□□□□ 0.61
CRAMP1-202ENST00000397412 CCDC194A0A1B0GVG4 234 aa18.89■□□□□ 0.61
CRAMP1-202ENST00000397412 U3KPZ7 1027 aaPredicted RBP18.89■□□□□ 0.61
CRAMP1-202ENST00000397412 TMEM110-MUSTN1A8MSY1 372 aa18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 MYD88Q99836 296 aa18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 THEMISQ8N1K5 641 aaPredicted RBP18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 PTPRGP23470 1445 aa18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 GPTP24298 496 aa18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 MAP3K12Q12852 859 aa18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 PRPF31Q8WWY3 499 aaKnown RBP18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 TMCO4Q5TGY1 634 aa18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 DAAM2Q86T65 1068 aa18.88■□□□□ 0.61
CRAMP1-202ENST00000397412 HLA-DOAP06340 250 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 ST5P78524 1137 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 ANKLE2Q86XL3 938 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 TRMT112Q9UI30 125 aaKnown RBP18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 STXBP4Q6ZWJ1 553 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 MAATS1Q7Z4T9 603 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 UBXN4Q92575 508 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 BOLA2Q9H3K6 86 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 CEP135Q66GS9 1140 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 PFDN4Q9NQP4 134 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 ARHGAP5Q13017 1502 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 IDEP14735 1019 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 IFIT5Q13325 482 aaKnown RBP18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 ISM2Q6H9L7 571 aa18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 IQCGQ9H095 443 aaKnown RBP18.87■□□□□ 0.61
CRAMP1-202ENST00000397412 TBC1D5Q92609 795 aa18.86■□□□□ 0.61
CRAMP1-202ENST00000397412 GSTA5Q7RTV2 222 aa18.86■□□□□ 0.61
CRAMP1-202ENST00000397412 ZNF213O14771 459 aa18.86■□□□□ 0.61
CRAMP1-202ENST00000397412 IFIT3O14879 490 aaKnown RBP18.85■□□□□ 0.61
CRAMP1-202ENST00000397412 KRT32Q14532 448 aa18.85■□□□□ 0.61
CRAMP1-202ENST00000397412 CCDC196A0A1B0GTZ2 297 aa18.85■□□□□ 0.61
CRAMP1-202ENST00000397412 BEGAINQ9BUH8 593 aa18.85■□□□□ 0.61
CRAMP1-202ENST00000397412 ATXN8OSP0DMR3 200 aa18.85■□□□□ 0.61
CRAMP1-202ENST00000397412 KMT5BQ4FZB7 885 aa18.85■□□□□ 0.61
CRAMP1-202ENST00000397412 PPP1R9BQ96SB3 815 aa18.85■□□□□ 0.61
CRAMP1-202ENST00000397412 NAP1L3Q99457 506 aaPredicted RBP18.84■□□□□ 0.61
CRAMP1-202ENST00000397412 TCHPQ9BT92 498 aa18.84■□□□□ 0.61
CRAMP1-202ENST00000397412 TOP1P11387 765 aaKnown RBP18.84■□□□□ 0.61
CRAMP1-202ENST00000397412 FAM107BQ9H098 131 aa18.84■□□□□ 0.61
CRAMP1-202ENST00000397412 PDZRN3Q9UPQ7 1066 aa18.84■□□□□ 0.61
CRAMP1-202ENST00000397412 POLR3GO15318 223 aaPredicted RBP18.84■□□□□ 0.61
CRAMP1-202ENST00000397412 ATP2C2O75185 946 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms