RNA–Protein interactions for RNA: ENST00000397305.3

RBFOX2-204, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 5

Gene RBFOX2, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-204ENST00000397305 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.02□□□□□ -0.33
RBFOX2-204ENST00000397305 KDRP35968 1356 aa13.02□□□□□ -0.33
RBFOX2-204ENST00000397305 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.33
RBFOX2-204ENST00000397305 BCAR3O75815 825 aa13.01□□□□□ -0.33
RBFOX2-204ENST00000397305 RARSP54136 660 aaKnown RBP13.01□□□□□ -0.33
RBFOX2-204ENST00000397305 SASS6Q6UVJ0 657 aa13.01□□□□□ -0.33
RBFOX2-204ENST00000397305 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
RBFOX2-204ENST00000397305 MNS1Q8NEH6 495 aa13.01□□□□□ -0.33
RBFOX2-204ENST00000397305 CRBNQ96SW2 442 aa13.01□□□□□ -0.33
RBFOX2-204ENST00000397305 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
RBFOX2-204ENST00000397305 PXDNQ92626 1479 aa13.01□□□□□ -0.33
RBFOX2-204ENST00000397305 SPATA31A3Q5VYP0 1347 aa13□□□□□ -0.33
RBFOX2-204ENST00000397305 FAM210AQ96ND0 272 aa13□□□□□ -0.33
RBFOX2-204ENST00000397305 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
RBFOX2-204ENST00000397305 ZC3H6P61129 1189 aaKnown RBP12.99□□□□□ -0.33
RBFOX2-204ENST00000397305 USHBP1Q8N6Y0 703 aa12.99□□□□□ -0.33
RBFOX2-204ENST00000397305 ANKRD24Q8TF21 1146 aa12.99□□□□□ -0.33
RBFOX2-204ENST00000397305 DONSONQ9NYP3 566 aa12.99□□□□□ -0.33
RBFOX2-204ENST00000397305 MED1Q15648 1581 aaPredicted RBP12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 LOC102724159A0A0B4J2E5 919 aa12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 KIF3CO14782 793 aa12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 ZBTB22O15209 634 aa12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 MCM5P33992 734 aa12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 CCDC173Q0VFZ6 552 aa12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 PWP2Q15269 919 aaKnown RBP12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 MTHFSDQ2M296 383 aaKnown RBP12.98□□□□□ -0.33
RBFOX2-204ENST00000397305 TRIM6-TRIM34B2RNG4 842 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 HTATSF1O43719 755 aaKnown RBP12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 CSB-PGBD3P0DP91 1061 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 PDE3AQ14432 1141 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 BECN1Q14457 450 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 ITFG2Q969R8 447 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 ZNF428Q96B54 188 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 PPP1R9BQ96SB3 815 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 BCL2L13Q9BXK5 485 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 TRIM34Q9BYJ4 488 aa12.97□□□□□ -0.33
RBFOX2-204ENST00000397305 MAP3K5Q99683 1374 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 ARID4AP29374 1257 aaPredicted RBP12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 MTA1Q13330 715 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 C20orf194Q5TEA3 1177 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 MCM10Q7L590 875 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 TMTC2Q8N394 836 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 FEZ1Q99689 392 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 MBIPQ9NS73 344 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 ABCC6O95255 1503 aa12.96□□□□□ -0.33
RBFOX2-204ENST00000397305 SOS2Q07890 1332 aaPredicted RBP12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 IPO8O15397 1037 aaKnown RBP12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 PRR29P0C7W0 189 aa12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 ZNF853P0CG23 659 aa12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 MSNP26038 577 aaKnown RBP12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 ALDH1L2Q3SY69 923 aa12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 PLEKHO1Q53GL0 409 aaPredicted RBP12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 CT47A1Q5JQC4 288 aaPredicted RBP12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 ZKSCAN2Q63HK3 967 aa12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 ZNF771Q7L3S4 317 aaPredicted RBP12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 RNF217Q8TC41 542 aa12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 GRPEL1Q9HAV7 217 aa12.95□□□□□ -0.34
RBFOX2-204ENST00000397305 AMOTQ4VCS5 1084 aa12.94□□□□□ -0.34
RBFOX2-204ENST00000397305 ANKRD23Q86SG2 305 aa12.94□□□□□ -0.34
RBFOX2-204ENST00000397305 CABLES1Q8TDN4 633 aa12.94□□□□□ -0.34
RBFOX2-204ENST00000397305 NLRP2Q9NX02 1062 aa12.94□□□□□ -0.34
RBFOX2-204ENST00000397305 MRVI1Q9Y6F6 885 aa12.94□□□□□ -0.34
RBFOX2-204ENST00000397305 IBTKQ9P2D0 1353 aaPredicted RBP12.94□□□□□ -0.34
RBFOX2-204ENST00000397305 NHSL1Q5SYE7 1610 aa12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 GTF2F1P35269 517 aaKnown RBP eCLIP12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 GTF2A1P52655 376 aaPredicted RBP12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 TWISTNBQ3B726 338 aaPredicted RBP12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 C1orf141Q5JVX7 400 aa12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 NBPF3Q9H094 633 aa12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 MED4Q9NPJ6 270 aa12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 TSPYL4Q9UJ04 414 aa12.93□□□□□ -0.34
RBFOX2-204ENST00000397305 ERBB3P21860 1342 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 NEFHP12036 1026 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 CAPN2P17655 700 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 SSH1Q8WYL5 1049 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 RAPGEF4Q8WZA2 1011 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 PRDM11Q9NQV5 511 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 R3HCC1Q9Y3T6 440 aaKnown RBP12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 FAM208AQ9UK61 1670 aaKnown RBP12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 CPDO75976 1380 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
RBFOX2-204ENST00000397305 CRYBG1Q9Y4K1 1723 aa12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 CRB1P82279 1406 aa12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 CHL1O00533 1208 aa12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 RINLQ6ZS11 566 aa12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 PANK1Q8TE04 598 aa12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 FEZ2Q9UHY8 353 aaPredicted RBP12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 AXIN2Q9Y2T1 843 aa12.91□□□□□ -0.34
RBFOX2-204ENST00000397305 CAMTA1Q9Y6Y1 1673 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms