RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 KCNQ3O43525 872 aa19.19■□□□□ 0.66
SEC13-208ENST00000397109 ZPR1O75312 459 aa19.19■□□□□ 0.66
SEC13-208ENST00000397109 USP42Q9H9J4 1324 aaKnown RBP19.19■□□□□ 0.66
SEC13-208ENST00000397109 NLGN2Q8NFZ4 835 aa19.18■□□□□ 0.66
SEC13-208ENST00000397109 C4AP0C0L4 1744 aa19.17■□□□□ 0.66
SEC13-208ENST00000397109 CANXP27824 592 aaKnown RBP19.17■□□□□ 0.66
SEC13-208ENST00000397109 RIPK4P57078 832 aa19.17■□□□□ 0.66
SEC13-208ENST00000397109 LMOD3Q0VAK6 560 aa19.17■□□□□ 0.66
SEC13-208ENST00000397109 SRP68Q9UHB9 627 aaKnown RBP19.17■□□□□ 0.66
SEC13-208ENST00000397109 COL15A1P39059 1388 aa19.16■□□□□ 0.66
SEC13-208ENST00000397109 A0A087WZG4 1122 aa19.16■□□□□ 0.66
SEC13-208ENST00000397109 SNRPA1P09661 255 aaKnown RBP19.16■□□□□ 0.66
SEC13-208ENST00000397109 TMPOP42166 694 aaKnown RBP19.16■□□□□ 0.66
SEC13-208ENST00000397109 GPR162Q16538 588 aa19.16■□□□□ 0.66
SEC13-208ENST00000397109 RUNDC1Q96C34 613 aa19.16■□□□□ 0.66
SEC13-208ENST00000397109 PARP3Q9Y6F1 533 aa19.16■□□□□ 0.66
SEC13-208ENST00000397109 EIF5P55010 431 aaKnown RBP19.16■□□□□ 0.66
SEC13-208ENST00000397109 NARFQ9UHQ1 456 aa19.16■□□□□ 0.66
SEC13-208ENST00000397109 ADAMTS8Q9UP79 889 aa19.16■□□□□ 0.66
SEC13-208ENST00000397109 NPM2Q86SE8 214 aaKnown RBP19.15■□□□□ 0.66
SEC13-208ENST00000397109 ANP32CO43423 234 aa19.14■□□□□ 0.65
SEC13-208ENST00000397109 IL6STP40189 918 aaPredicted RBP19.14■□□□□ 0.65
SEC13-208ENST00000397109 FKBP8Q14318 412 aa19.14■□□□□ 0.65
SEC13-208ENST00000397109 USPL1Q5W0Q7 1092 aa19.14■□□□□ 0.65
SEC13-208ENST00000397109 CCDC146Q8IYE0 955 aa19.13■□□□□ 0.65
SEC13-208ENST00000397109 MIER1Q8N108 512 aa19.13■□□□□ 0.65
SEC13-208ENST00000397109 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
SEC13-208ENST00000397109 MIS18AQ9NYP9 233 aa19.13■□□□□ 0.65
SEC13-208ENST00000397109 USP16Q9Y5T5 823 aa19.13■□□□□ 0.65
SEC13-208ENST00000397109 A1BGP04217 495 aa19.12■□□□□ 0.65
SEC13-208ENST00000397109 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
SEC13-208ENST00000397109 TM4SF1P30408 202 aa19.11■□□□□ 0.65
SEC13-208ENST00000397109 BABAM1Q9NWV8 329 aa19.11■□□□□ 0.65
SEC13-208ENST00000397109 GRIN3BO60391 1043 aa19.1■□□□□ 0.65
SEC13-208ENST00000397109 TGFB2P61812 414 aa19.1■□□□□ 0.65
SEC13-208ENST00000397109 YY1P25490 414 aa19.09■□□□□ 0.65
SEC13-208ENST00000397109 NEUROD2Q15784 382 aa19.09■□□□□ 0.65
SEC13-208ENST00000397109 RRP7AQ9Y3A4 280 aaKnown RBP19.09■□□□□ 0.65
SEC13-208ENST00000397109 ZNF330Q9Y3S2 320 aaPredicted RBP19.09■□□□□ 0.65
SEC13-208ENST00000397109 PRAMEF22A3QJZ6 481 aa19.09■□□□□ 0.65
SEC13-208ENST00000397109 EIF4A1P60842 406 aaKnown RBP19.09■□□□□ 0.65
SEC13-208ENST00000397109 TSPYL4Q9UJ04 414 aa19.09■□□□□ 0.65
SEC13-208ENST00000397109 KDM3BQ7LBC6 1761 aa19.08■□□□□ 0.65
SEC13-208ENST00000397109 C10orf71Q711Q0 1435 aa19.08■□□□□ 0.64
SEC13-208ENST00000397109 POLRMTO00411 1230 aaKnown RBP19.08■□□□□ 0.64
SEC13-208ENST00000397109 GIGYF1O75420 1035 aaPredicted RBP19.08■□□□□ 0.64
SEC13-208ENST00000397109 DDR1Q08345 913 aa19.08■□□□□ 0.64
SEC13-208ENST00000397109 BCL2L12Q9HB09 334 aa19.08■□□□□ 0.64
SEC13-208ENST00000397109 KIF13BQ9NQT8 1826 aa19.07■□□□□ 0.64
SEC13-208ENST00000397109 NFIXQ14938 502 aa19.07■□□□□ 0.64
SEC13-208ENST00000397109 TBC1D2BQ9UPU7 963 aa19.06■□□□□ 0.64
SEC13-208ENST00000397109 CHD4Q14839 1912 aa19.06■□□□□ 0.64
SEC13-208ENST00000397109 YBX3P16989 372 aaKnown RBP eCLIP19.05■□□□□ 0.649e-10■■□□□ 14.4
SEC13-208ENST00000397109 DZIP3Q86Y13 1208 aaKnown RBP19.05■□□□□ 0.64
SEC13-208ENST00000397109 TRIM35Q9UPQ4 493 aa19.05■□□□□ 0.64
SEC13-208ENST00000397109 CAMTA2O94983 1202 aa19.03■□□□□ 0.64
SEC13-208ENST00000397109 SERPINB2P05120 415 aa19.03■□□□□ 0.64
SEC13-208ENST00000397109 PXDNLA1KZ92 1463 aa19.03■□□□□ 0.64
SEC13-208ENST00000397109 NBPF26B4DH59 902 aa19.03■□□□□ 0.64
SEC13-208ENST00000397109 APAF1O14727 1248 aa19.03■□□□□ 0.64
SEC13-208ENST00000397109 RGL2O15211 777 aa19.03■□□□□ 0.64
SEC13-208ENST00000397109 PIP4K2AP48426 406 aaPredicted RBP19.03■□□□□ 0.64
SEC13-208ENST00000397109 NBPF10Q6P3W6 841 aaKnown RBP19.03■□□□□ 0.64
SEC13-208ENST00000397109 NBPF15Q8N660 670 aa19.03■□□□□ 0.64
SEC13-208ENST00000397109 LAMB4A4D0S4 1761 aa19.02■□□□□ 0.64
SEC13-208ENST00000397109 A0A0G2JLW4 131 aa19.02■□□□□ 0.63
SEC13-208ENST00000397109 CHL1O00533 1208 aa19.02■□□□□ 0.63
SEC13-208ENST00000397109 CCDC184Q52MB2 194 aa19.02■□□□□ 0.63
SEC13-208ENST00000397109 TBC1D9BQ66K14 1250 aa19.02■□□□□ 0.63
SEC13-208ENST00000397109 CLEC4GQ6UXB4 293 aa19.02■□□□□ 0.63
SEC13-208ENST00000397109 BICDL1Q6ZP65 573 aa19.02■□□□□ 0.63
SEC13-208ENST00000397109 MRS2Q9HD23 443 aa19.02■□□□□ 0.63
SEC13-208ENST00000397109 ZNF652Q9Y2D9 606 aa19.02■□□□□ 0.63
SEC13-208ENST00000397109 DPEP1P16444 411 aa19.01■□□□□ 0.63
SEC13-208ENST00000397109 ERBB4Q15303 1308 aa19.01■□□□□ 0.63
SEC13-208ENST00000397109 SCN7AQ01118 1682 aa19■□□□□ 0.63
SEC13-208ENST00000397109 CALD1Q05682 793 aaKnown RBP19■□□□□ 0.63
SEC13-208ENST00000397109 SETDB2Q96T68 719 aa19■□□□□ 0.63
SEC13-208ENST00000397109 LAS1LQ9Y4W2 734 aaKnown RBP19■□□□□ 0.63
SEC13-208ENST00000397109 CENPBP07199 599 aaPredicted RBP18.99■□□□□ 0.63
SEC13-208ENST00000397109 CARMIL3Q8ND23 1372 aa18.99■□□□□ 0.63
SEC13-208ENST00000397109 N4BP2Q86UW6 1770 aaPredicted RBP18.99■□□□□ 0.63
SEC13-208ENST00000397109 AFDNP55196 1824 aaKnown RBP18.99■□□□□ 0.63
SEC13-208ENST00000397109 CFAP44Q96MT7 982 aa18.98■□□□□ 0.63
SEC13-208ENST00000397109 PIM2Q9P1W9 311 aa18.98■□□□□ 0.63
SEC13-208ENST00000397109 KIAA1551Q9HCM1 1747 aa18.98■□□□□ 0.63
SEC13-208ENST00000397109 NRXN2Q9P2S2 1712 aa18.98■□□□□ 0.63
SEC13-208ENST00000397109 UTRNP46939 3433 aa18.98■□□□□ 0.63
SEC13-208ENST00000397109 WWC3Q9ULE0 1092 aa18.97■□□□□ 0.63
SEC13-208ENST00000397109 CCER2I3L3R5 266 aa18.97■□□□□ 0.63
SEC13-208ENST00000397109 KCNA3P22001 575 aa18.97■□□□□ 0.63
SEC13-208ENST00000397109 BCS1LQ9Y276 419 aa18.97■□□□□ 0.63
SEC13-208ENST00000397109 BCORQ6W2J9 1755 aa18.96■□□□□ 0.63
SEC13-208ENST00000397109 GOLGB1Q14789 3259 aaKnown RBP18.96■□□□□ 0.63
SEC13-208ENST00000397109 ERVV-1B6SEH8 477 aa18.96■□□□□ 0.63
SEC13-208ENST00000397109 EIF2S2P20042 333 aaKnown RBP18.96■□□□□ 0.63
SEC13-208ENST00000397109 NGEFQ8N5V2 710 aa18.96■□□□□ 0.63
SEC13-208ENST00000397109 PDZRN3Q9UPQ7 1066 aa18.96■□□□□ 0.63
SEC13-208ENST00000397109 NPHP1O15259 732 aa18.95■□□□□ 0.62
SEC13-208ENST00000397109 MYL6BP14649 208 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms