RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 CHD1LQ86WJ1 897 aa21.42■■□□□ 1.02
SCNN1A-205ENST00000396966 PAPPAQ13219 1627 aa21.41■■□□□ 1.02
SCNN1A-205ENST00000396966 GNAI2P04899 355 aa21.41■■□□□ 1.02
SCNN1A-205ENST00000396966 ZNF496Q96IT1 587 aaPredicted RBP21.41■■□□□ 1.02
SCNN1A-205ENST00000396966 DDX21Q9NR30 783 aaKnown RBP eCLIP21.41■■□□□ 1.02
SCNN1A-205ENST00000396966 NRAPQ86VF7 1730 aa21.41■■□□□ 1.02
SCNN1A-205ENST00000396966 ANXA1P04083 346 aa21.41■■□□□ 1.02
SCNN1A-205ENST00000396966 SNRPA1P09661 255 aaKnown RBP21.41■■□□□ 1.02
SCNN1A-205ENST00000396966 DNAAF4Q8WXU2 420 aa21.41■■□□□ 1.02
SCNN1A-205ENST00000396966 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
SCNN1A-205ENST00000396966 SRCIN1Q9C0H9 1055 aa21.4■■□□□ 1.02
SCNN1A-205ENST00000396966 PI4KAP2A4QPH2 592 aa21.4■■□□□ 1.02
SCNN1A-205ENST00000396966 HMMRO75330 724 aa21.4■■□□□ 1.02
SCNN1A-205ENST00000396966 PI4KAP1Q8N8J0 262 aa21.4■■□□□ 1.02
SCNN1A-205ENST00000396966 TOGARAM1Q9Y4F4 1720 aa21.39■■□□□ 1.02
SCNN1A-205ENST00000396966 LNPKQ9C0E8 428 aa21.39■■□□□ 1.02
SCNN1A-205ENST00000396966 DCTPP1Q9H773 170 aa21.39■■□□□ 1.02
SCNN1A-205ENST00000396966 UBAP1LF5GYI3 381 aa21.39■■□□□ 1.01
SCNN1A-205ENST00000396966 NWD2Q9ULI1 1742 aa21.39■■□□□ 1.01
SCNN1A-205ENST00000396966 DISP2A7MBM2 1401 aa21.38■■□□□ 1.01
SCNN1A-205ENST00000396966 ADAMTS2O95450 1211 aa21.38■■□□□ 1.01
SCNN1A-205ENST00000396966 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
SCNN1A-205ENST00000396966 PROSER3Q2NL68 480 aa21.38■■□□□ 1.01
SCNN1A-205ENST00000396966 ADCY9O60503 1353 aa21.37■■□□□ 1.01
SCNN1A-205ENST00000396966 ITGB4P16144 1822 aa21.37■■□□□ 1.01
SCNN1A-205ENST00000396966 KSR2Q6VAB6 950 aa21.37■■□□□ 1.01
SCNN1A-205ENST00000396966 UBTFL1P0CB47 393 aaPredicted RBP21.36■■□□□ 1.01
SCNN1A-205ENST00000396966 GLI3P10071 1580 aa21.36■■□□□ 1.01
SCNN1A-205ENST00000396966 PDIA6Q15084 440 aa21.35■■□□□ 1.01
SCNN1A-205ENST00000396966 BEND3Q5T5X7 828 aa21.35■■□□□ 1.01
SCNN1A-205ENST00000396966 USP44Q9H0E7 712 aa21.35■■□□□ 1.01
SCNN1A-205ENST00000396966 NUTM2BA6NNL0 878 aaPredicted RBP21.35■■□□□ 1.01
SCNN1A-205ENST00000396966 NUTM2EB1AL46 878 aaPredicted RBP21.35■■□□□ 1.01
SCNN1A-205ENST00000396966 NUTM2AQ8IVF1 878 aaPredicted RBP21.35■■□□□ 1.01
SCNN1A-205ENST00000396966 MAP3K2Q9Y2U5 619 aa21.35■■□□□ 1.01
SCNN1A-205ENST00000396966 USP16Q9Y5T5 823 aa21.34■■□□□ 1.01
SCNN1A-205ENST00000396966 NFKBIBQ15653 356 aa21.34■■□□□ 1.01
SCNN1A-205ENST00000396966 EXOC5O00471 708 aa21.33■■□□□ 1
SCNN1A-205ENST00000396966 TMOD3Q9NYL9 352 aa21.33■■□□□ 1
SCNN1A-205ENST00000396966 KCPQ6ZWJ8 1503 aa21.32■■□□□ 1
SCNN1A-205ENST00000396966 ALDH1L1O75891 902 aa21.32■■□□□ 1
SCNN1A-205ENST00000396966 MYL6BP14649 208 aa21.32■■□□□ 1
SCNN1A-205ENST00000396966 AIMP1Q12904 312 aaKnown RBP21.32■■□□□ 1
SCNN1A-205ENST00000396966 CDCA7Q9BWT1 371 aaPredicted RBP21.32■■□□□ 1
SCNN1A-205ENST00000396966 ATP8B2P98198 1209 aa21.32■■□□□ 1
SCNN1A-205ENST00000396966 THRAP3Q9Y2W1 955 aaKnown RBP21.32■■□□□ 1
SCNN1A-205ENST00000396966 LRRFIP2Q9Y608 721 aaKnown RBP21.32■■□□□ 1
SCNN1A-205ENST00000396966 LRP6O75581 1613 aa21.32■■□□□ 1
SCNN1A-205ENST00000396966 UPF2Q9HAU5 1272 aaKnown RBP21.3■■□□□ 1
SCNN1A-205ENST00000396966 RIC3Q7Z5B4 369 aa21.3■■□□□ 1
SCNN1A-205ENST00000396966 KAT6BQ8WYB5 2073 aa21.3■■□□□ 1
SCNN1A-205ENST00000396966 ERBB4Q15303 1308 aa21.3■■□□□ 1
SCNN1A-205ENST00000396966 TNS2Q63HR2 1409 aa21.29■■□□□ 1
SCNN1A-205ENST00000396966 SPATA31A1Q5TZJ5 1347 aa21.29■■□□□ 1
SCNN1A-205ENST00000396966 HDAC5Q9UQL6 1122 aa21.29■■□□□ 1
SCNN1A-205ENST00000396966 ARFGEF2Q9Y6D5 1785 aa21.28■■□□□ 1
SCNN1A-205ENST00000396966 COPS6Q7L5N1 327 aa21.28■■□□□ 1
SCNN1A-205ENST00000396966 LINS1Q8NG48 757 aa21.28■■□□□ 1
SCNN1A-205ENST00000396966 XAGE3Q8WTP9 111 aa21.28■■□□□ 1
SCNN1A-205ENST00000396966 AFDNP55196 1824 aaKnown RBP21.28■■□□□ 1
SCNN1A-205ENST00000396966 SLIT2O94813 1529 aa21.28■■□□□ 1
SCNN1A-205ENST00000396966 NEXNQ0ZGT2 675 aa21.27■■□□□ 1
SCNN1A-205ENST00000396966 C9orf78Q9NZ63 289 aaPredicted RBP21.27■■□□□ 1
SCNN1A-205ENST00000396966 AEBP2Q6ZN18 517 aaPredicted RBP21.27■□□□□ 0.99
SCNN1A-205ENST00000396966 JCADQ9P266 1359 aa21.27■□□□□ 0.99
SCNN1A-205ENST00000396966 PTCD1O75127 700 aaKnown RBP21.26■□□□□ 0.99
SCNN1A-205ENST00000396966 NBPF7P0C2Y1 421 aaPredicted RBP21.26■□□□□ 0.99
SCNN1A-205ENST00000396966 PNMA6EA0A0J9YXQ4 647 aa21.26■□□□□ 0.99
SCNN1A-205ENST00000396966 DOT1LQ8TEK3 1739 aa21.26■□□□□ 0.99
SCNN1A-205ENST00000396966 TBC1D32Q96NH3 1257 aa21.26■□□□□ 0.99
SCNN1A-205ENST00000396966 ANKRD13DQ6ZTN6 518 aa21.25■□□□□ 0.99
SCNN1A-205ENST00000396966 LRP10Q7Z4F1 713 aa21.25■□□□□ 0.99
SCNN1A-205ENST00000396966 SPATA31A5Q5VU36 1347 aa21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 SPATA31A7Q8IWB4 1347 aa21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 BECN1Q14457 450 aa21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 BMP2KLQ5H9B9 411 aa21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 APBB1O00213 710 aa21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 CWF19L2Q2TBE0 894 aaKnown RBP21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 PIGBQ92521 554 aa21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 CCDC9Q9Y3X0 531 aaKnown RBP21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 IBTKQ9P2D0 1353 aaPredicted RBP21.24■□□□□ 0.99
SCNN1A-205ENST00000396966 DDB1Q16531 1140 aa21.23■□□□□ 0.99
SCNN1A-205ENST00000396966 METTL22Q9BUU2 404 aaPredicted RBP21.23■□□□□ 0.99
SCNN1A-205ENST00000396966 PIP4K2AP48426 406 aaPredicted RBP21.23■□□□□ 0.99
SCNN1A-205ENST00000396966 SSH3Q8TE77 659 aa21.23■□□□□ 0.99
SCNN1A-205ENST00000396966 TEX13AQ9BXU3 409 aaPredicted RBP21.22■□□□□ 0.99
SCNN1A-205ENST00000396966 FRAT2O75474 233 aaPredicted RBP21.22■□□□□ 0.99
SCNN1A-205ENST00000396966 PPP1R42Q7Z4L9 355 aa21.22■□□□□ 0.99
SCNN1A-205ENST00000396966 PLEKHM2Q8IWE5 1019 aa21.22■□□□□ 0.99
SCNN1A-205ENST00000396966 VSIG10Q8N0Z9 540 aa21.22■□□□□ 0.99
SCNN1A-205ENST00000396966 EXOC6BQ9Y2D4 811 aa21.22■□□□□ 0.99
SCNN1A-205ENST00000396966 BCL9O00512 1426 aa21.22■□□□□ 0.99
SCNN1A-205ENST00000396966 GRM8O00222 908 aa21.21■□□□□ 0.99
SCNN1A-205ENST00000396966 SMARCA5O60264 1052 aaPredicted RBP21.21■□□□□ 0.99
SCNN1A-205ENST00000396966 NUP188Q5SRE5 1749 aa21.21■□□□□ 0.99
SCNN1A-205ENST00000396966 BARGINQ6ZT62 677 aa21.21■□□□□ 0.99
SCNN1A-205ENST00000396966 MYD88Q99836 296 aa21.21■□□□□ 0.99
SCNN1A-205ENST00000396966 LRRCC1Q9C099 1032 aa21.21■□□□□ 0.99
SCNN1A-205ENST00000396966 ASAP1Q9ULH1 1129 aa21.21■□□□□ 0.99
SCNN1A-205ENST00000396966 UTYO14607 1347 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms