RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 HEG1Q9ULI3 1381 aa19.87■□□□□ 0.77
SNX6-202ENST00000396526 PDE1AP54750 535 aa19.87■□□□□ 0.77
SNX6-202ENST00000396526 KDM3BQ7LBC6 1761 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 SRGAP3O43295 1099 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 REC8O95072 547 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 SNRPA1P09661 255 aaKnown RBP19.86■□□□□ 0.77
SNX6-202ENST00000396526 PPP1R42Q7Z4L9 355 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 FMNL2Q96PY5 1086 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 SLKQ9H2G2 1235 aaPredicted RBP19.86■□□□□ 0.77
SNX6-202ENST00000396526 WDR17Q8IZU2 1322 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 NFKBIBQ15653 356 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 SLC39A6Q13433 755 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 RIC3Q7Z5B4 369 aa19.86■□□□□ 0.77
SNX6-202ENST00000396526 SDSP20132 328 aa19.85■□□□□ 0.77
SNX6-202ENST00000396526 LARP1Q6PKG0 1096 aaKnown RBP19.85■□□□□ 0.77
SNX6-202ENST00000396526 OS9Q13438 667 aaPredicted RBP19.85■□□□□ 0.77
SNX6-202ENST00000396526 LINS1Q8NG48 757 aa19.85■□□□□ 0.77
SNX6-202ENST00000396526 ZCRB1Q8TBF4 217 aaKnown RBP19.85■□□□□ 0.77
SNX6-202ENST00000396526 OTUD7AQ8TE49 926 aaPredicted RBP19.85■□□□□ 0.77
SNX6-202ENST00000396526 IBTKQ9P2D0 1353 aaPredicted RBP19.85■□□□□ 0.77
SNX6-202ENST00000396526 MX1P20591 662 aa19.84■□□□□ 0.77
SNX6-202ENST00000396526 AIMP1Q12904 312 aaKnown RBP19.84■□□□□ 0.77
SNX6-202ENST00000396526 KIF1BPQ96EK5 621 aa19.84■□□□□ 0.77
SNX6-202ENST00000396526 SNX21Q969T3 373 aa19.83■□□□□ 0.77
SNX6-202ENST00000396526 RGPD5Q99666 1765 aa19.83■□□□□ 0.77
SNX6-202ENST00000396526 PCDH11XQ9BZA7 1347 aa19.83■□□□□ 0.77
SNX6-202ENST00000396526 PCDH11YQ9BZA8 1340 aa19.83■□□□□ 0.77
SNX6-202ENST00000396526 CYP27B1O15528 508 aa19.83■□□□□ 0.76
SNX6-202ENST00000396526 MEGF6O75095 1541 aa19.83■□□□□ 0.76
SNX6-202ENST00000396526 NBPF7P0C2Y1 421 aaPredicted RBP19.83■□□□□ 0.76
SNX6-202ENST00000396526 HSP90AA1P07900 732 aaKnown RBP19.82■□□□□ 0.76
SNX6-202ENST00000396526 ADCY9O60503 1353 aa19.82■□□□□ 0.76
SNX6-202ENST00000396526 ZNF496Q96IT1 587 aaPredicted RBP19.81■□□□□ 0.76
SNX6-202ENST00000396526 IL2RBP14784 551 aa19.81■□□□□ 0.76
SNX6-202ENST00000396526 POLA2Q14181 598 aa19.81■□□□□ 0.76
SNX6-202ENST00000396526 PROSER3Q2NL68 480 aa19.81■□□□□ 0.76
SNX6-202ENST00000396526 CARD10Q9BWT7 1032 aa19.81■□□□□ 0.76
SNX6-202ENST00000396526 KDM6AO15550 1401 aaPredicted RBP19.8■□□□□ 0.76
SNX6-202ENST00000396526 TRIM6-TRIM34B2RNG4 842 aa19.8■□□□□ 0.76
SNX6-202ENST00000396526 AOX1Q06278 1338 aa19.8■□□□□ 0.76
SNX6-202ENST00000396526 ERC2O15083 957 aa19.8■□□□□ 0.76
SNX6-202ENST00000396526 ERC1Q8IUD2 1116 aa19.8■□□□□ 0.76
SNX6-202ENST00000396526 STRN4Q9NRL3 753 aa19.8■□□□□ 0.76
SNX6-202ENST00000396526 MYL6BP14649 208 aa19.79■□□□□ 0.76
SNX6-202ENST00000396526 PRAMEF22A3QJZ6 481 aa19.79■□□□□ 0.76
SNX6-202ENST00000396526 GRM8O00222 908 aa19.79■□□□□ 0.76
SNX6-202ENST00000396526 RHPN1Q8TCX5 695 aa19.79■□□□□ 0.76
SNX6-202ENST00000396526 STAP2Q9UGK3 403 aa19.79■□□□□ 0.76
SNX6-202ENST00000396526 COL18A1P39060 1754 aa19.79■□□□□ 0.76
SNX6-202ENST00000396526 ERVV-2B6SEH9 535 aa19.78■□□□□ 0.76
SNX6-202ENST00000396526 CHMP5Q9NZZ3 219 aa19.78■□□□□ 0.76
SNX6-202ENST00000396526 RABEP1Q15276 862 aa19.78■□□□□ 0.76
SNX6-202ENST00000396526 MTX1Q13505 466 aa19.77■□□□□ 0.76
SNX6-202ENST00000396526 CLASRPQ8N2M8 674 aaKnown RBP19.77■□□□□ 0.76
SNX6-202ENST00000396526 RILPL2Q969X0 211 aa19.77■□□□□ 0.76
SNX6-202ENST00000396526 MCCP23508 829 aa19.77■□□□□ 0.76
SNX6-202ENST00000396526 DEKP35659 375 aaKnown RBP19.77■□□□□ 0.76
SNX6-202ENST00000396526 ANKRD13DQ6ZTN6 518 aa19.77■□□□□ 0.76
SNX6-202ENST00000396526 COPS6Q7L5N1 327 aa19.77■□□□□ 0.76
SNX6-202ENST00000396526 XAGE3Q8WTP9 111 aa19.77■□□□□ 0.76
SNX6-202ENST00000396526 GPATCH3Q96I76 525 aa19.77■□□□□ 0.76
SNX6-202ENST00000396526 IL1RAPL2Q9NP60 686 aa19.77■□□□□ 0.76
SNX6-202ENST00000396526 SPRYD3Q8NCJ5 442 aa19.76■□□□□ 0.75
SNX6-202ENST00000396526 STRCQ7RTU9 1775 aa19.76■□□□□ 0.75
SNX6-202ENST00000396526 CWF19L2Q2TBE0 894 aaKnown RBP19.76■□□□□ 0.75
SNX6-202ENST00000396526 USP26Q9BXU7 913 aa19.75■□□□□ 0.75
SNX6-202ENST00000396526 DDX54Q8TDD1 881 aaKnown RBP19.75■□□□□ 0.75
SNX6-202ENST00000396526 ERBB4Q15303 1308 aa19.75■□□□□ 0.75
SNX6-202ENST00000396526 ADAMTS7Q9UKP4 1686 aa19.75■□□□□ 0.75
SNX6-202ENST00000396526 G3BP1Q13283 466 aaKnown RBP eCLIP19.74■□□□□ 0.75
SNX6-202ENST00000396526 PDIA6Q15084 440 aa19.74■□□□□ 0.75
SNX6-202ENST00000396526 METTL22Q9BUU2 404 aaPredicted RBP19.74■□□□□ 0.75
SNX6-202ENST00000396526 USP16Q9Y5T5 823 aa19.74■□□□□ 0.75
SNX6-202ENST00000396526 N4BP2Q86UW6 1770 aaPredicted RBP19.73■□□□□ 0.75
SNX6-202ENST00000396526 SALL3Q9BXA9 1300 aa19.73■□□□□ 0.75
SNX6-202ENST00000396526 ST18O60284 1047 aa19.73■□□□□ 0.75
SNX6-202ENST00000396526 ANTXR1Q9H6X2 564 aa19.73■□□□□ 0.75
SNX6-202ENST00000396526 SCN11AQ9UI33 1791 aa19.73■□□□□ 0.75
SNX6-202ENST00000396526 FRAT2O75474 233 aaPredicted RBP19.72■□□□□ 0.75
SNX6-202ENST00000396526 MYD88Q99836 296 aa19.72■□□□□ 0.75
SNX6-202ENST00000396526 XIRP1Q702N8 1843 aaKnown RBP19.72■□□□□ 0.75
SNX6-202ENST00000396526 K7ELQ4 463 aaPredicted RBP19.72■□□□□ 0.75
SNX6-202ENST00000396526 COL5A2P05997 1499 aaPredicted RBP19.72■□□□□ 0.75
SNX6-202ENST00000396526 NUTM1Q86Y26 1132 aa19.72■□□□□ 0.75
SNX6-202ENST00000396526 IFIT2P09913 472 aaKnown RBP19.71■□□□□ 0.75
SNX6-202ENST00000396526 NKX1-1Q15270 411 aaPredicted RBP19.71■□□□□ 0.75
SNX6-202ENST00000396526 CNTROBQ8N137 903 aa19.71■□□□□ 0.75
SNX6-202ENST00000396526 UTYO14607 1347 aa19.71■□□□□ 0.75
SNX6-202ENST00000396526 CIZ1Q9ULV3 898 aaPredicted RBP19.71■□□□□ 0.75
SNX6-202ENST00000396526 MRC1P22897 1456 aa19.7■□□□□ 0.74
SNX6-202ENST00000396526 SIPA1L3O60292 1781 aaPredicted RBP19.7■□□□□ 0.74
SNX6-202ENST00000396526 GLRX3O76003 335 aaKnown RBP19.7■□□□□ 0.74
SNX6-202ENST00000396526 TSHZ3Q63HK5 1081 aa19.7■□□□□ 0.74
SNX6-202ENST00000396526 TTC41PQ6P2S7 1318 aa19.7■□□□□ 0.74
SNX6-202ENST00000396526 NEURL1BA8MQ27 555 aa19.7■□□□□ 0.74
SNX6-202ENST00000396526 GCKRQ14397 625 aa19.7■□□□□ 0.74
SNX6-202ENST00000396526 KIF2CQ99661 725 aa19.69■□□□□ 0.74
SNX6-202ENST00000396526 ESYT1Q9BSJ8 1104 aa19.69■□□□□ 0.74
SNX6-202ENST00000396526 PLBD2Q8NHP8 589 aa19.69■□□□□ 0.74
SNX6-202ENST00000396526 SUCLG2Q96I99 432 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms