RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 ESYT1Q9BSJ8 1104 aa7.86□□□□□ -1.15
BDNF-203ENST00000395978 USP26Q9BXU7 913 aa7.86□□□□□ -1.15
BDNF-203ENST00000395978 ALDH1L1O75891 902 aa7.86□□□□□ -1.15
BDNF-203ENST00000395978 BAG4O95429 457 aaKnown RBP7.86□□□□□ -1.15
BDNF-203ENST00000395978 IFNL2Q8IZJ0 200 aa7.86□□□□□ -1.15
BDNF-203ENST00000395978 RNF214Q8ND24 703 aa7.86□□□□□ -1.15
BDNF-203ENST00000395978 ZSCAN31Q96LW9 406 aaPredicted RBP7.86□□□□□ -1.15
BDNF-203ENST00000395978 ALKQ9UM73 1620 aa7.86□□□□□ -1.15
BDNF-203ENST00000395978 CLTCQ00610 1675 aaKnown RBP7.86□□□□□ -1.15
BDNF-203ENST00000395978 ANKRD1Q15327 319 aa7.86□□□□□ -1.15
BDNF-203ENST00000395978 PDRG1Q9NUG6 133 aa7.86□□□□□ -1.15
BDNF-203ENST00000395978 MED14O60244 1454 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 CCDC173Q0VFZ6 552 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 BLOC1S2Q6QNY1 142 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 KSR2Q6VAB6 950 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 NEURL4Q96JN8 1562 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 MYD88Q99836 296 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 PHAXQ9H814 394 aaKnown RBP7.85□□□□□ -1.15
BDNF-203ENST00000395978 QRICH2Q9H0J4 1663 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 CDK12Q9NYV4 1490 aaPredicted RBP7.85□□□□□ -1.15
BDNF-203ENST00000395978 ANAPC15P60006 121 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 WASHC4Q2M389 1173 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 CPLX2Q6PUV4 134 aaKnown RBP7.85□□□□□ -1.15
BDNF-203ENST00000395978 FIBPO43427 364 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 CASTP20810 708 aaKnown RBP7.85□□□□□ -1.15
BDNF-203ENST00000395978 GTF2E1P29083 439 aaPredicted RBP7.85□□□□□ -1.15
BDNF-203ENST00000395978 CADPS2Q86UW7 1296 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 BICD2Q8TD16 824 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 FMNL2Q96PY5 1086 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 CCDC8Q9H0W5 538 aaPredicted RBP7.85□□□□□ -1.15
BDNF-203ENST00000395978 BOLA2Q9H3K6 86 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 C19orf44Q9H6X5 657 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 TOMM22Q9NS69 142 aa7.85□□□□□ -1.15
BDNF-203ENST00000395978 USP6P35125 1406 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 CPLX1O14810 134 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 HOXB7P09629 217 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 TRDNQ13061 729 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 PRPF40BQ6NWY9 871 aaKnown RBP7.84□□□□□ -1.15
BDNF-203ENST00000395978 IL17REQ8NFR9 667 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 ADGRB1O14514 1584 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 APPP05067 770 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 RAB3GAP1Q15042 981 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 LINS1Q8NG48 757 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 TMX3Q96JJ7 454 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 NEXMIFQ5QGS0 1516 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 RTL1A6NKG5 1358 aa7.84□□□□□ -1.15
BDNF-203ENST00000395978 PTCD1O75127 700 aaKnown RBP7.84□□□□□ -1.16
BDNF-203ENST00000395978 LETM1O95202 739 aaPredicted RBP7.84□□□□□ -1.16
BDNF-203ENST00000395978 LARP1BQ659C4 914 aaKnown RBP7.84□□□□□ -1.16
BDNF-203ENST00000395978 EVI5LQ96CN4 794 aa7.84□□□□□ -1.16
BDNF-203ENST00000395978 LIMCH1Q9UPQ0 1083 aa7.84□□□□□ -1.16
BDNF-203ENST00000395978 USP19O94966 1318 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 RNMTO43148 476 aaKnown RBP7.83□□□□□ -1.16
BDNF-203ENST00000395978 SNRPA1P09661 255 aaKnown RBP7.83□□□□□ -1.16
BDNF-203ENST00000395978 KLHL40Q2TBA0 621 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 NBPF6Q5VWK0 638 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 KIF6Q6ZMV9 814 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 NBPF4Q96M43 638 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 TSPY26PQ9H489 355 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 LGR6Q9HBX8 967 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 CEP126Q9P2H0 1117 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 PTPRMP28827 1452 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 NLRP1Q9C000 1473 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 IGSF1Q8N6C5 1336 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 A0A087WZG4 1122 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 GRM8O00222 908 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 KRT32Q14532 448 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 CHRNA2Q15822 529 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 ANKRD13DQ6ZTN6 518 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 RALYLQ86SE5 291 aaKnown RBP7.83□□□□□ -1.16
BDNF-203ENST00000395978 ORAI2Q96SN7 254 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 CHMLP26374 656 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 SLC39A6Q13433 755 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 CCDC57Q2TAC2 916 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 CCDC158Q5M9N0 1113 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 SIRT2Q8IXJ6 389 aa7.83□□□□□ -1.16
BDNF-203ENST00000395978 SH2B1Q9NRF2 756 aaPredicted RBP7.82□□□□□ -1.16
BDNF-203ENST00000395978 PNMA6EA0A0J9YXQ4 647 aa7.82□□□□□ -1.16
BDNF-203ENST00000395978 ESPNB1AK53 854 aa7.82□□□□□ -1.16
BDNF-203ENST00000395978 GOLGA6L19H0YKK7 550 aa7.82□□□□□ -1.16
BDNF-203ENST00000395978 GSPT1P15170 499 aaKnown RBP7.82□□□□□ -1.16
BDNF-203ENST00000395978 COPS6Q7L5N1 327 aa7.82□□□□□ -1.16
BDNF-203ENST00000395978 XAGE3Q8WTP9 111 aa7.82□□□□□ -1.16
BDNF-203ENST00000395978 BECN2A8MW95 431 aa7.82□□□□□ -1.16
BDNF-203ENST00000395978 NPHP3Q7Z494 1330 aa7.82□□□□□ -1.16
BDNF-203ENST00000395978 XRCC6P12956 609 aaKnown RBP eCLIP7.81□□□□□ -1.16
BDNF-203ENST00000395978 EIF4A1P60842 406 aaKnown RBP7.81□□□□□ -1.16
BDNF-203ENST00000395978 TPM4P67936 248 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 KRT85P78386 507 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 SYNE3Q6ZMZ3 975 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 UBE3BQ7Z3V4 1068 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 CCDC83Q8IWF9 413 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 DDX21Q9NR30 783 aaKnown RBP eCLIP7.81□□□□□ -1.16
BDNF-203ENST00000395978 STK3Q13188 491 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 USP44Q9H0E7 712 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 CCDC39Q9UFE4 941 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 CPSF1Q10570 1443 aaKnown RBP7.81□□□□□ -1.16
BDNF-203ENST00000395978 PREX1Q8TCU6 1659 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 ATP5J2-PTCD1G3V325 749 aa7.81□□□□□ -1.16
BDNF-203ENST00000395978 CWF19L2Q2TBE0 894 aaKnown RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms