RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 MAP3K5Q99683 1374 aa11.01□□□□□ -0.65
HERC4-203ENST00000395185 BTBD11A6QL63 1104 aa11□□□□□ -0.65
HERC4-203ENST00000395185 GNPATO15228 680 aa11□□□□□ -0.65
HERC4-203ENST00000395185 STARD3NLO95772 234 aa11□□□□□ -0.65
HERC4-203ENST00000395185 SSFA2P28290 1259 aa11□□□□□ -0.65
HERC4-203ENST00000395185 DCTN1Q14203 1278 aa11□□□□□ -0.65
HERC4-203ENST00000395185 MCM10Q7L590 875 aa11□□□□□ -0.65
HERC4-203ENST00000395185 NPM2Q86SE8 214 aaKnown RBP11□□□□□ -0.65
HERC4-203ENST00000395185 COL23A1Q86Y22 540 aaPredicted RBP11□□□□□ -0.65
HERC4-203ENST00000395185 RNF123Q5XPI4 1314 aa11□□□□□ -0.65
HERC4-203ENST00000395185 TNS1Q9HBL0 1735 aaKnown RBP11□□□□□ -0.65
HERC4-203ENST00000395185 RGPD2P0DJD1 1756 aa11□□□□□ -0.65
HERC4-203ENST00000395185 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.99□□□□□ -0.65
HERC4-203ENST00000395185 PHF14O94880 888 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 RFC4P35249 363 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 GNAI1P63096 354 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 SLC39A6Q13433 755 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 ITPK1Q13572 414 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 LINC00116Q8NCU8 138 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 ARXQ96QS3 562 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 MYH16Q9H6N6 1097 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 PNPLA7Q6ZV29 1317 aa10.99□□□□□ -0.65
HERC4-203ENST00000395185 NHSQ6T4R5 1651 aa10.98□□□□□ -0.65
HERC4-203ENST00000395185 WNK3Q9BYP7 1800 aa10.98□□□□□ -0.65
HERC4-203ENST00000395185 RPS6KA4O75676 772 aa10.98□□□□□ -0.65
HERC4-203ENST00000395185 CT47B1P0C2W7 299 aaPredicted RBP10.98□□□□□ -0.65
HERC4-203ENST00000395185 TAF7Q15545 349 aaPredicted RBP10.98□□□□□ -0.65
HERC4-203ENST00000395185 CHADLQ6NUI6 762 aa10.98□□□□□ -0.65
HERC4-203ENST00000395185 ZNF790Q6PG37 636 aa10.98□□□□□ -0.65
HERC4-203ENST00000395185 KDM6AO15550 1401 aaPredicted RBP10.98□□□□□ -0.65
HERC4-203ENST00000395185 KAT6BQ8WYB5 2073 aa10.97□□□□□ -0.65
HERC4-203ENST00000395185 PTGER2P43116 358 aa10.97□□□□□ -0.65
HERC4-203ENST00000395185 NLGN1Q8N2Q7 840 aa10.97□□□□□ -0.65
HERC4-203ENST00000395185 FMNL2Q96PY5 1086 aa10.97□□□□□ -0.65
HERC4-203ENST00000395185 MBIPQ9NS73 344 aa10.97□□□□□ -0.65
HERC4-203ENST00000395185 FANCIQ9NVI1 1328 aa10.97□□□□□ -0.65
HERC4-203ENST00000395185 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.65
HERC4-203ENST00000395185 CNTNAP4Q9C0A0 1308 aa10.96□□□□□ -0.65
HERC4-203ENST00000395185 SLC4A9Q96Q91 983 aa10.96□□□□□ -0.65
HERC4-203ENST00000395185 SBF2Q86WG5 1849 aa10.95□□□□□ -0.66
HERC4-203ENST00000395185 ZPR1O75312 459 aa10.95□□□□□ -0.66
HERC4-203ENST00000395185 VAMP4O75379 141 aa10.95□□□□□ -0.66
HERC4-203ENST00000395185 CRKLP46109 303 aaKnown RBP10.95□□□□□ -0.66
HERC4-203ENST00000395185 DNAJC10Q8IXB1 793 aa10.95□□□□□ -0.66
HERC4-203ENST00000395185 KLHL34Q8N239 644 aa10.95□□□□□ -0.66
HERC4-203ENST00000395185 ARHGEF1Q92888 912 aaKnown RBP10.95□□□□□ -0.66
HERC4-203ENST00000395185 CCDC87Q9NVE4 849 aa10.95□□□□□ -0.66
HERC4-203ENST00000395185 PKD1L3Q7Z443 1732 aa10.95□□□□□ -0.66
HERC4-203ENST00000395185 HEG1Q9ULI3 1381 aa10.94□□□□□ -0.66
HERC4-203ENST00000395185 A0A087WZG4 1122 aa10.94□□□□□ -0.66
HERC4-203ENST00000395185 SNRPA1P09661 255 aaKnown RBP10.94□□□□□ -0.66
HERC4-203ENST00000395185 BRPF1P55201 1214 aaPredicted RBP10.94□□□□□ -0.66
HERC4-203ENST00000395185 EXOSC9Q06265 439 aaKnown RBP10.94□□□□□ -0.66
HERC4-203ENST00000395185 TSR2Q969E8 191 aaKnown RBP10.94□□□□□ -0.66
HERC4-203ENST00000395185 ZNF496Q96IT1 587 aaPredicted RBP10.94□□□□□ -0.66
HERC4-203ENST00000395185 FHDC1Q9C0D6 1143 aaPredicted RBP10.94□□□□□ -0.66
HERC4-203ENST00000395185 CREBZFQ9NS37 354 aa10.94□□□□□ -0.66
HERC4-203ENST00000395185 RCAN3Q9UKA8 241 aa10.94□□□□□ -0.66
HERC4-203ENST00000395185 RGPD3A6NKT7 1758 aaPredicted RBP10.93□□□□□ -0.66
HERC4-203ENST00000395185 RGPD4Q7Z3J3 1758 aa10.93□□□□□ -0.66
HERC4-203ENST00000395185 CYP19A1P11511 503 aaPredicted RBP10.93□□□□□ -0.66
HERC4-203ENST00000395185 MSL1Q68DK7 614 aa10.93□□□□□ -0.66
HERC4-203ENST00000395185 C8orf58Q8NAV2 365 aa10.93□□□□□ -0.66
HERC4-203ENST00000395185 ZNF428Q96B54 188 aa10.93□□□□□ -0.66
HERC4-203ENST00000395185 SGIP1Q9BQI5 828 aa10.93□□□□□ -0.66
HERC4-203ENST00000395185 SYT17Q9BSW7 474 aa10.93□□□□□ -0.66
HERC4-203ENST00000395185 DLG5Q8TDM6 1919 aa10.93□□□□□ -0.66
HERC4-203ENST00000395185 BTAF1O14981 1849 aa10.93□□□□□ -0.66
HERC4-203ENST00000395185 SOS1Q07889 1333 aaPredicted RBP10.92□□□□□ -0.66
HERC4-203ENST00000395185 CANXP27824 592 aaKnown RBP10.92□□□□□ -0.66
HERC4-203ENST00000395185 RARSP54136 660 aaKnown RBP10.92□□□□□ -0.66
HERC4-203ENST00000395185 INTS5Q6P9B9 1019 aaKnown RBP10.92□□□□□ -0.66
HERC4-203ENST00000395185 TSPYL6Q8N831 410 aa10.92□□□□□ -0.66
HERC4-203ENST00000395185 MIS18AQ9NYP9 233 aa10.92□□□□□ -0.66
HERC4-203ENST00000395185 MRC1P22897 1456 aa10.92□□□□□ -0.66
HERC4-203ENST00000395185 RREB1Q92766 1687 aa10.92□□□□□ -0.66
HERC4-203ENST00000395185 EIF4A1P60842 406 aaKnown RBP10.91□□□□□ -0.66
HERC4-203ENST00000395185 SMIM5Q71RC9 77 aa10.91□□□□□ -0.66
HERC4-203ENST00000395185 SUPT16HQ9Y5B9 1047 aaKnown RBP10.91□□□□□ -0.66
HERC4-203ENST00000395185 CD2APQ9Y5K6 639 aa10.91□□□□□ -0.66
HERC4-203ENST00000395185 PARP3Q9Y6F1 533 aa10.91□□□□□ -0.66
HERC4-203ENST00000395185 NUP188Q5SRE5 1749 aa10.9□□□□□ -0.66
HERC4-203ENST00000395185 DOT1LQ8TEK3 1739 aa10.9□□□□□ -0.66
HERC4-203ENST00000395185 KCNQ3O43525 872 aa10.9□□□□□ -0.66
HERC4-203ENST00000395185 TSPYL4Q9UJ04 414 aa10.9□□□□□ -0.66
HERC4-203ENST00000395185 FARP1Q9Y4F1 1045 aaPredicted RBP10.9□□□□□ -0.66
HERC4-203ENST00000395185 MMP10P09238 476 aa10.89□□□□□ -0.67
HERC4-203ENST00000395185 HOXB7P09629 217 aa10.89□□□□□ -0.67
HERC4-203ENST00000395185 IL6STP40189 918 aaPredicted RBP10.89□□□□□ -0.67
HERC4-203ENST00000395185 GPR162Q16538 588 aa10.89□□□□□ -0.67
HERC4-203ENST00000395185 ALDH1L2Q3SY69 923 aa10.89□□□□□ -0.67
HERC4-203ENST00000395185 AMIGO3Q86WK7 504 aa10.89□□□□□ -0.67
HERC4-203ENST00000395185 NARFQ9UHQ1 456 aa10.89□□□□□ -0.67
HERC4-203ENST00000395185 ZNF330Q9Y3S2 320 aaPredicted RBP10.89□□□□□ -0.67
HERC4-203ENST00000395185 LAS1LQ9Y4W2 734 aaKnown RBP10.89□□□□□ -0.67
HERC4-203ENST00000395185 SHANK3Q9BYB0 1731 aa10.89□□□□□ -0.67
HERC4-203ENST00000395185 HAX1O00165 279 aa10.88□□□□□ -0.67
HERC4-203ENST00000395185 A1BGP04217 495 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms