RNA–Protein interactions for RNA: ENST00000394945.5

SPOCK1-202, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPOCK1, Length 4,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-202ENST00000394945 VPS37DQ86XT2 251 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 CCDC12Q8WUD4 166 aaPredicted RBP18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 CPLX3Q8WVH0 158 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 CDKL5O76039 1030 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 SLC3A2P08195 630 aaKnown RBP18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 PTGS1P23219 599 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 GUCY1B3Q02153 619 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 KLHL10Q6JEL2 608 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 IQGAP2Q13576 1575 aa18.1■□□□□ 0.49
SPOCK1-202ENST00000394945 VGLL3A8MV65 326 aa18.09■□□□□ 0.49
SPOCK1-202ENST00000394945 DAPK1P53355 1430 aa18.09■□□□□ 0.49
SPOCK1-202ENST00000394945 GRIN2AQ12879 1464 aa18.09■□□□□ 0.49
SPOCK1-202ENST00000394945 TANGO6Q9C0B7 1094 aa18.08■□□□□ 0.49
SPOCK1-202ENST00000394945 FYB1O15117 783 aa18.08■□□□□ 0.48
SPOCK1-202ENST00000394945 SDSP20132 328 aa18.08■□□□□ 0.48
SPOCK1-202ENST00000394945 CCAR1Q8IX12 1150 aaKnown RBP18.08■□□□□ 0.48
SPOCK1-202ENST00000394945 CABP1Q9NZU7 370 aa18.08■□□□□ 0.48
SPOCK1-202ENST00000394945 CDK5RAP3Q96JB5 506 aa18.07■□□□□ 0.48
SPOCK1-202ENST00000394945 SPG7Q9UQ90 795 aa18.07■□□□□ 0.48
SPOCK1-202ENST00000394945 GABPB1Q06547 395 aaPredicted RBP18.07■□□□□ 0.48
SPOCK1-202ENST00000394945 TAF4BQ92750 862 aa18.07■□□□□ 0.48
SPOCK1-202ENST00000394945 MTMR7Q9Y216 660 aa18.07■□□□□ 0.48
SPOCK1-202ENST00000394945 ZGPATQ8N5A5 531 aaKnown RBP18.07■□□□□ 0.48
SPOCK1-202ENST00000394945 DACT1Q9NYF0 836 aa18.07■□□□□ 0.48
SPOCK1-202ENST00000394945 MAPKBP1O60336 1514 aa18.07■□□□□ 0.48
SPOCK1-202ENST00000394945 RIOK3O14730 519 aaKnown RBP18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 TTC31Q49AM3 519 aaPredicted RBP18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 CTNNA3Q9UI47 895 aa18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 PRAM1Q96QH2 718 aa18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 SRRTQ9BXP5 876 aaKnown RBP18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 PIBF1Q8WXW3 757 aa18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 SPA17Q15506 151 aa18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 MICALL1Q8N3F8 863 aa18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 GTF3C6Q969F1 213 aa18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 DNAJC25Q9H1X3 360 aa18.06■□□□□ 0.48
SPOCK1-202ENST00000394945 NLRP6P59044 892 aa18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 CCDC158Q5M9N0 1113 aa18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 C8orf76Q96K31 380 aa18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 PAFAH1B1P43034 410 aa18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 LIG1P18858 919 aa18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 RPRD2Q5VT52 1461 aaKnown RBP18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 ZNF445P59923 1031 aa18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 ARHGEF11O15085 1522 aa18.05■□□□□ 0.48
SPOCK1-202ENST00000394945 CCDC69A6NI79 296 aa18.04■□□□□ 0.48
SPOCK1-202ENST00000394945 TYRO3Q06418 890 aa18.04■□□□□ 0.48
SPOCK1-202ENST00000394945 SEPT7Q16181 437 aaKnown RBP18.04■□□□□ 0.48
SPOCK1-202ENST00000394945 G3V3G9 751 aa18.04■□□□□ 0.48
SPOCK1-202ENST00000394945 TUBB4AP04350 444 aa18.04■□□□□ 0.48
SPOCK1-202ENST00000394945 MAP2K1Q02750 393 aaPredicted RBP18.04■□□□□ 0.48
SPOCK1-202ENST00000394945 DCAF8Q5TAQ9 597 aa18.04■□□□□ 0.48
SPOCK1-202ENST00000394945 NF2P35240 595 aa18.04■□□□□ 0.48
SPOCK1-202ENST00000394945 TSHZ3Q63HK5 1081 aa18.03■□□□□ 0.48
SPOCK1-202ENST00000394945 NUP133Q8WUM0 1156 aa18.03■□□□□ 0.48
SPOCK1-202ENST00000394945 TMX4Q9H1E5 349 aaPredicted RBP18.03■□□□□ 0.48
SPOCK1-202ENST00000394945 RNF123Q5XPI4 1314 aa18.03■□□□□ 0.48
SPOCK1-202ENST00000394945 DNM1Q05193 864 aaKnown RBP18.03■□□□□ 0.48
SPOCK1-202ENST00000394945 F6X3S4 739 aa18.03■□□□□ 0.48
SPOCK1-202ENST00000394945 CNNM3Q8NE01 707 aa18.03■□□□□ 0.48
SPOCK1-202ENST00000394945 LUZP1Q86V48 1076 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 C17orf53Q8N3J3 647 aaPredicted RBP18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 RAPGEF4Q8WZA2 1011 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 RLBP1P12271 317 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 TTC39AQ5SRH9 613 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 NUTM2GQ5VZR2 741 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 ISM2Q6H9L7 571 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 FBXO3Q9UK99 471 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 NUP88Q99567 741 aaPredicted RBP18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 BOLA2Q9H3K6 86 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 TCEAL9Q9UHQ7 104 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 TNNQ9UQP3 1299 aa18.02■□□□□ 0.48
SPOCK1-202ENST00000394945 F13A1P00488 732 aa18.02■□□□□ 0.47
SPOCK1-202ENST00000394945 PCF11O94913 1555 aaKnown RBP18.02■□□□□ 0.47
SPOCK1-202ENST00000394945 TSC1Q92574 1164 aa18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 KDM2BQ8NHM5 1336 aa18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 ANAPC15P60006 121 aa18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 FKBP4Q02790 459 aaKnown RBP eCLIP18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 ERO1AQ96HE7 468 aa18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 CCDC43Q96MW1 224 aaKnown RBP18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 UBASH3AP57075 661 aa18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 MIS18AQ9NYP9 233 aa18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 BCCIPQ9P287 314 aaKnown RBP eCLIP18.01■□□□□ 0.47
SPOCK1-202ENST00000394945 GBP2P32456 591 aaPredicted RBP18■□□□□ 0.47
SPOCK1-202ENST00000394945 CCDC113Q9H0I3 377 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 YEATS4O95619 227 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 SYCP1Q15431 976 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 NECAB1Q8N987 351 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 CDK19Q9BWU1 502 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 VPS18Q9P253 973 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 KRT18P05783 430 aaKnown RBP18■□□□□ 0.47
SPOCK1-202ENST00000394945 CCDC175P0C221 793 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 SYT10Q6XYQ8 523 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 EBAG9O00559 213 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 SPECC1Q5M775 1068 aa18■□□□□ 0.47
SPOCK1-202ENST00000394945 GOLGA6L10A0A0M3HER8 536 aa17.99■□□□□ 0.47
SPOCK1-202ENST00000394945 CTAGE15A4D2H0 777 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms