RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 ODF2Q5BJF6 829 aa16.97■□□□□ 0.31
PPARGC1B-203ENST00000394320 PRM3Q9NNZ6 103 aa16.97■□□□□ 0.31
PPARGC1B-203ENST00000394320 PPP1R1BQ9UD71 204 aaPredicted RBP16.97■□□□□ 0.31
PPARGC1B-203ENST00000394320 ABCC1P33527 1531 aa16.97■□□□□ 0.31
PPARGC1B-203ENST00000394320 TXLNBQ8N3L3 684 aa16.97■□□□□ 0.31
PPARGC1B-203ENST00000394320 SMARCC1Q92922 1105 aaPredicted RBP16.97■□□□□ 0.31
PPARGC1B-203ENST00000394320 SMC2O95347 1197 aa16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 HMGN5P82970 282 aaKnown RBP16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 WWC2Q6AWC2 1192 aa16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 LUC7LQ9NQ29 371 aaKnown RBP16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 HDAC1Q13547 482 aaPredicted RBP16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 LDHCP07864 332 aa16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 ATP7AQ04656 1500 aa16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 PI4KAP2A4QPH2 592 aa16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 PI4KAP1Q8N8J0 262 aa16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 ZNHIT6Q9NWK9 470 aaKnown RBP16.96■□□□□ 0.31
PPARGC1B-203ENST00000394320 YTHDC2Q9H6S0 1430 aaKnown RBP16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 KDM4AO75164 1064 aa16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 DZIP1Q86YF9 867 aaKnown RBP16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 RPGRQ92834 1020 aaKnown RBP16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 NPC1L1Q9UHC9 1359 aa16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 CBFA2T2O43439 604 aa16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 RDXP35241 583 aaKnown RBP16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 USP5P45974 858 aa16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 CEBPZQ03701 1054 aaKnown RBP16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 MAST1Q9Y2H9 1570 aa16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 SMARCA5O60264 1052 aaPredicted RBP16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 PRPF40BQ6NWY9 871 aaKnown RBP16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 POLKQ9UBT6 870 aa16.95■□□□□ 0.3
PPARGC1B-203ENST00000394320 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 CEP57L1Q8IYX8 460 aa16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 ARID3AQ99856 593 aa16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 ZBTB3Q9H5J0 574 aa16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 MCM4P33991 863 aa16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 ANKIB1Q9P2G1 1089 aa16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 NEO1Q92859 1461 aa16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 UQCRFS1P1P0C7P4 283 aa16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 SCAND2PQ9GZW5 306 aaPredicted RBP16.94■□□□□ 0.3
PPARGC1B-203ENST00000394320 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 POLR3DP05423 398 aaPredicted RBP16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 NUP62CLQ9H1M0 184 aa16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 HSP90AA2PQ14568 343 aaPredicted RBP16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 AK7Q96M32 723 aa16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 CCDC8Q9H0W5 538 aaPredicted RBP16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 PZPP20742 1482 aa16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 CTCFLQ8NI51 663 aaPredicted RBP16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 MKNK2Q9HBH9 465 aa16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 HMG20BQ9P0W2 317 aa16.93■□□□□ 0.3
PPARGC1B-203ENST00000394320 ZNF213O14771 459 aa16.92■□□□□ 0.3
PPARGC1B-203ENST00000394320 CHRNA2Q15822 529 aa16.92■□□□□ 0.3
PPARGC1B-203ENST00000394320 TEX35Q5T0J7 233 aa16.92■□□□□ 0.3
PPARGC1B-203ENST00000394320 FAM83GA6ND36 823 aa16.92■□□□□ 0.3
PPARGC1B-203ENST00000394320 SPTY2D1Q68D10 685 aaPredicted RBP16.92■□□□□ 0.3
PPARGC1B-203ENST00000394320 MYO6Q9UM54 1294 aa16.92■□□□□ 0.3
PPARGC1B-203ENST00000394320 LIMCH1Q9UPQ0 1083 aa16.92■□□□□ 0.3
PPARGC1B-203ENST00000394320 SAMD9Q5K651 1589 aa16.92■□□□□ 0.3
PPARGC1B-203ENST00000394320 SERPINC1P01008 464 aa16.91■□□□□ 0.3
PPARGC1B-203ENST00000394320 UBE3BQ7Z3V4 1068 aa16.91■□□□□ 0.3
PPARGC1B-203ENST00000394320 CEP170Q5SW79 1584 aa16.91■□□□□ 0.3
PPARGC1B-203ENST00000394320 RUFY1Q96T51 708 aa16.91■□□□□ 0.3
PPARGC1B-203ENST00000394320 SYCP1Q15431 976 aa16.91■□□□□ 0.3
PPARGC1B-203ENST00000394320 DDX46Q7L014 1031 aaKnown RBP16.91■□□□□ 0.3
PPARGC1B-203ENST00000394320 SEC63Q9UGP8 760 aaKnown RBP16.91■□□□□ 0.3
PPARGC1B-203ENST00000394320 PPFIBP1Q86W92 1011 aa16.91■□□□□ 0.3
PPARGC1B-203ENST00000394320 TMEM132AQ24JP5 1023 aa16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 SMTNL1A8MU46 457 aa16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 ZFYP08048 801 aaPredicted RBP16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 KSR2Q6VAB6 950 aa16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 STK11IPQ8N1F8 1099 aa16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 ERCC4Q92889 916 aaPredicted RBP16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 CRACR2BQ8N4Y2 399 aaPredicted RBP16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 CCDC152Q4G0S7 254 aa16.9■□□□□ 0.3
PPARGC1B-203ENST00000394320 COL17A1Q9UMD9 1497 aaPredicted RBP16.89■□□□□ 0.29
PPARGC1B-203ENST00000394320 MINDY4BA8MYZ0 360 aa16.89■□□□□ 0.29
PPARGC1B-203ENST00000394320 GPTP24298 496 aa16.89■□□□□ 0.29
PPARGC1B-203ENST00000394320 ZNF444Q8N0Y2 327 aaPredicted RBP16.89■□□□□ 0.29
PPARGC1B-203ENST00000394320 SPINK5Q9NQ38 1064 aaPredicted RBP16.89■□□□□ 0.29
PPARGC1B-203ENST00000394320 MTERF4Q7Z6M4 381 aaKnown RBP16.89■□□□□ 0.29
PPARGC1B-203ENST00000394320 ANKRD44Q8N8A2 993 aa16.89■□□□□ 0.29
PPARGC1B-203ENST00000394320 IL2RBP14784 551 aa16.88■□□□□ 0.29
PPARGC1B-203ENST00000394320 TNNT3P45378 269 aaPredicted RBP16.88■□□□□ 0.29
PPARGC1B-203ENST00000394320 TTC22Q5TAA0 569 aa16.88■□□□□ 0.29
PPARGC1B-203ENST00000394320 UPF3BQ9BZI7 483 aaKnown RBP16.88■□□□□ 0.29
PPARGC1B-203ENST00000394320 A0A1W2PP64 1363 aa16.88■□□□□ 0.29
PPARGC1B-203ENST00000394320 MAP3K5Q99683 1374 aa16.88■□□□□ 0.29
PPARGC1B-203ENST00000394320 BAG3O95817 575 aa16.88■□□□□ 0.29
PPARGC1B-203ENST00000394320 RHPN1Q8TCX5 695 aa16.88■□□□□ 0.29
PPARGC1B-203ENST00000394320 HSP90B2PQ58FF3 399 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 CCDC83Q8IWF9 413 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 ZNF76P36508 570 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 LINS1Q8NG48 757 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 MAP3K11Q16584 847 aa16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 MRPL50Q8N5N7 158 aaKnown RBP16.87■□□□□ 0.29
PPARGC1B-203ENST00000394320 IP6K1Q92551 441 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms