RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 HMMRO75330 724 aa17.76■□□□□ 0.43
RNF41-202ENST00000394013 DDX54Q8TDD1 881 aaKnown RBP17.76■□□□□ 0.43
RNF41-202ENST00000394013 WDR17Q8IZU2 1322 aa17.76■□□□□ 0.43
RNF41-202ENST00000394013 SDSP20132 328 aa17.75■□□□□ 0.43
RNF41-202ENST00000394013 JARID2Q92833 1246 aaPredicted RBP17.75■□□□□ 0.43
RNF41-202ENST00000394013 OVOS2A0A0G2JMS6 1433 aa17.75■□□□□ 0.43
RNF41-202ENST00000394013 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
RNF41-202ENST00000394013 RBM42Q9BTD8 480 aaKnown RBP17.74■□□□□ 0.43
RNF41-202ENST00000394013 N4BP2Q86UW6 1770 aaPredicted RBP17.74■□□□□ 0.43
RNF41-202ENST00000394013 PXDNLA1KZ92 1463 aa17.74■□□□□ 0.43
RNF41-202ENST00000394013 CABP4P57796 275 aa17.73■□□□□ 0.43
RNF41-202ENST00000394013 DCAF5Q96JK2 942 aa17.73■□□□□ 0.43
RNF41-202ENST00000394013 ABCA3Q99758 1704 aa17.73■□□□□ 0.43
RNF41-202ENST00000394013 SRGAP3O43295 1099 aa17.73■□□□□ 0.43
RNF41-202ENST00000394013 PDE1AP54750 535 aa17.72■□□□□ 0.43
RNF41-202ENST00000394013 XAGE3Q8WTP9 111 aa17.72■□□□□ 0.43
RNF41-202ENST00000394013 KIF2CQ99661 725 aa17.72■□□□□ 0.43
RNF41-202ENST00000394013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.72■□□□□ 0.43
RNF41-202ENST00000394013 CDC45O75419 566 aa17.72■□□□□ 0.43
RNF41-202ENST00000394013 KSR2Q6VAB6 950 aa17.72■□□□□ 0.43
RNF41-202ENST00000394013 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
RNF41-202ENST00000394013 PKD1L3Q7Z443 1732 aa17.71■□□□□ 0.43
RNF41-202ENST00000394013 IBTKQ9P2D0 1353 aaPredicted RBP17.71■□□□□ 0.43
RNF41-202ENST00000394013 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
RNF41-202ENST00000394013 ZCRB1Q8TBF4 217 aaKnown RBP17.71■□□□□ 0.43
RNF41-202ENST00000394013 LRRCC1Q9C099 1032 aa17.71■□□□□ 0.43
RNF41-202ENST00000394013 DDX21Q9NR30 783 aaKnown RBP eCLIP17.71■□□□□ 0.43
RNF41-202ENST00000394013 CD2BP2O95400 341 aaKnown RBP17.71■□□□□ 0.42
RNF41-202ENST00000394013 EVA1CP58658 441 aa17.71■□□□□ 0.42
RNF41-202ENST00000394013 COPS6Q7L5N1 327 aa17.71■□□□□ 0.42
RNF41-202ENST00000394013 PA2G4Q9UQ80 394 aaKnown RBP17.71■□□□□ 0.42
RNF41-202ENST00000394013 TTC5Q8N0Z6 440 aa17.7■□□□□ 0.42
RNF41-202ENST00000394013 SSH3Q8TE77 659 aa17.7■□□□□ 0.42
RNF41-202ENST00000394013 IGKV5-2P06315 115 aa17.7■□□□□ 0.42
RNF41-202ENST00000394013 SALL3Q9BXA9 1300 aa17.69■□□□□ 0.42
RNF41-202ENST00000394013 MAP4K4O95819 1239 aaPredicted RBP17.69■□□□□ 0.42
RNF41-202ENST00000394013 NFKBIBQ15653 356 aa17.69■□□□□ 0.42
RNF41-202ENST00000394013 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
RNF41-202ENST00000394013 BTG4Q9NY30 223 aa17.69■□□□□ 0.42
RNF41-202ENST00000394013 C9orf78Q9NZ63 289 aaPredicted RBP17.69■□□□□ 0.42
RNF41-202ENST00000394013 PTCD1O75127 700 aaKnown RBP17.69■□□□□ 0.42
RNF41-202ENST00000394013 KAZALD1Q96I82 304 aa17.69■□□□□ 0.42
RNF41-202ENST00000394013 HYPKQ9NX55 129 aa17.69■□□□□ 0.42
RNF41-202ENST00000394013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
RNF41-202ENST00000394013 RBM25P49756 843 aaKnown RBP17.68■□□□□ 0.42
RNF41-202ENST00000394013 POLA2Q14181 598 aa17.68■□□□□ 0.42
RNF41-202ENST00000394013 LRP10Q7Z4F1 713 aa17.68■□□□□ 0.42
RNF41-202ENST00000394013 RIC3Q7Z5B4 369 aa17.68■□□□□ 0.42
RNF41-202ENST00000394013 IL2RBP14784 551 aa17.67■□□□□ 0.42
RNF41-202ENST00000394013 BECN1Q14457 450 aa17.67■□□□□ 0.42
RNF41-202ENST00000394013 SUCLG2Q96I99 432 aa17.67■□□□□ 0.42
RNF41-202ENST00000394013 NHSL1Q5SYE7 1610 aa17.67■□□□□ 0.42
RNF41-202ENST00000394013 FRAT2O75474 233 aaPredicted RBP17.67■□□□□ 0.42
RNF41-202ENST00000394013 MYD88Q99836 296 aa17.67■□□□□ 0.42
RNF41-202ENST00000394013 MX1P20591 662 aa17.66■□□□□ 0.42
RNF41-202ENST00000394013 KLHDC4Q8TBB5 520 aa17.66■□□□□ 0.42
RNF41-202ENST00000394013 KAT6BQ8WYB5 2073 aa17.66■□□□□ 0.42
RNF41-202ENST00000394013 MRC1P22897 1456 aa17.66■□□□□ 0.42
RNF41-202ENST00000394013 ATP5J2-PTCD1G3V325 749 aa17.66■□□□□ 0.42
RNF41-202ENST00000394013 SNRPA1P09661 255 aaKnown RBP17.66■□□□□ 0.42
RNF41-202ENST00000394013 CARD10Q9BWT7 1032 aa17.66■□□□□ 0.42
RNF41-202ENST00000394013 GLI3P10071 1580 aa17.66■□□□□ 0.42
RNF41-202ENST00000394013 ABCC6O95255 1503 aa17.65■□□□□ 0.42
RNF41-202ENST00000394013 FMNL2Q96PY5 1086 aa17.65■□□□□ 0.42
RNF41-202ENST00000394013 NBPF26B4DH59 902 aa17.65■□□□□ 0.42
RNF41-202ENST00000394013 RTL5Q5HYW3 569 aaPredicted RBP17.65■□□□□ 0.42
RNF41-202ENST00000394013 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
RNF41-202ENST00000394013 NBPF14Q5TI25 921 aa17.65■□□□□ 0.42
RNF41-202ENST00000394013 NBPF10Q6P3W6 841 aaKnown RBP17.65■□□□□ 0.42
RNF41-202ENST00000394013 NBPF15Q8N660 670 aa17.65■□□□□ 0.42
RNF41-202ENST00000394013 PCDH11XQ9BZA7 1347 aa17.65■□□□□ 0.42
RNF41-202ENST00000394013 PCDH11YQ9BZA8 1340 aa17.65■□□□□ 0.42
RNF41-202ENST00000394013 SHANK3Q9BYB0 1731 aa17.64■□□□□ 0.42
RNF41-202ENST00000394013 A1BGP04217 495 aa17.64■□□□□ 0.42
RNF41-202ENST00000394013 RHPN1Q8TCX5 695 aa17.64■□□□□ 0.42
RNF41-202ENST00000394013 BICC1Q9H694 974 aaKnown RBP17.64■□□□□ 0.42
RNF41-202ENST00000394013 ANTXR1Q9H6X2 564 aa17.64■□□□□ 0.42
RNF41-202ENST00000394013 FOXD4L1Q9NU39 408 aa17.64■□□□□ 0.42
RNF41-202ENST00000394013 RILPL2Q969X0 211 aa17.64■□□□□ 0.41
RNF41-202ENST00000394013 LINS1Q8NG48 757 aa17.63■□□□□ 0.41
RNF41-202ENST00000394013 IL25Q9H293 177 aa17.63■□□□□ 0.41
RNF41-202ENST00000394013 GRM8O00222 908 aa17.63■□□□□ 0.41
RNF41-202ENST00000394013 OSBPL3Q9H4L5 887 aa17.63■□□□□ 0.41
RNF41-202ENST00000394013 PARP4Q9UKK3 1724 aaKnown RBP17.63■□□□□ 0.41
RNF41-202ENST00000394013 TRIM6-TRIM34B2RNG4 842 aa17.62■□□□□ 0.41
RNF41-202ENST00000394013 ROBO1Q9Y6N7 1651 aa17.62■□□□□ 0.41
RNF41-202ENST00000394013 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
RNF41-202ENST00000394013 ALDH1L1O75891 902 aa17.62■□□□□ 0.41
RNF41-202ENST00000394013 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
RNF41-202ENST00000394013 TTLL7Q6ZT98 887 aa17.62■□□□□ 0.41
RNF41-202ENST00000394013 SIL1Q9H173 461 aa17.62■□□□□ 0.41
RNF41-202ENST00000394013 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
RNF41-202ENST00000394013 USP26Q9BXU7 913 aa17.61■□□□□ 0.41
RNF41-202ENST00000394013 ADAMTS2O95450 1211 aa17.61■□□□□ 0.41
RNF41-202ENST00000394013 DDX58O95786 925 aaKnown RBP17.61■□□□□ 0.41
RNF41-202ENST00000394013 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
RNF41-202ENST00000394013 TUBGCP6Q96RT7 1819 aa17.6■□□□□ 0.41
RNF41-202ENST00000394013 TOGARAM1Q9Y4F4 1720 aa17.6■□□□□ 0.41
RNF41-202ENST00000394013 ASAP1Q9ULH1 1129 aa17.6■□□□□ 0.41
RNF41-202ENST00000394013 DEKP35659 375 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 823 ms