RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 KSR2Q6VAB6 950 aa27.68■■■□□ 2.02
HMGA2-203ENST00000393578 USP35Q9P2H5 1018 aa27.68■■■□□ 2.02
HMGA2-203ENST00000393578 UBTFL1P0CB47 393 aaPredicted RBP27.67■■■□□ 2.02
HMGA2-203ENST00000393578 DDX58O95786 925 aaKnown RBP27.65■■■□□ 2.02
HMGA2-203ENST00000393578 ZBTB47Q9UFB7 747 aaPredicted RBP27.65■■■□□ 2.02
HMGA2-203ENST00000393578 MAP3K2Q9Y2U5 619 aa27.64■■■□□ 2.02
HMGA2-203ENST00000393578 ATP8B2P98198 1209 aa27.64■■■□□ 2.01
HMGA2-203ENST00000393578 LRRFIP2Q9Y608 721 aaKnown RBP27.64■■■□□ 2.01
HMGA2-203ENST00000393578 DISP2A7MBM2 1401 aa27.62■■■□□ 2.01
HMGA2-203ENST00000393578 ALDH1L1O75891 902 aa27.62■■■□□ 2.01
HMGA2-203ENST00000393578 BMP2KLQ5H9B9 411 aa27.62■■■□□ 2.01
HMGA2-203ENST00000393578 USP16Q9Y5T5 823 aa27.62■■■□□ 2.01
HMGA2-203ENST00000393578 SEC24BO95487 1268 aa27.61■■■□□ 2.01
HMGA2-203ENST00000393578 GLI3P10071 1580 aa27.61■■■□□ 2.01
HMGA2-203ENST00000393578 PLCH1Q4KWH8 1693 aa27.6■■■□□ 2.01
HMGA2-203ENST00000393578 UBR2Q8IWV8 1755 aa27.6■■■□□ 2.01
HMGA2-203ENST00000393578 PAPPAQ13219 1627 aa27.6■■■□□ 2.01
HMGA2-203ENST00000393578 LAMB4A4D0S4 1761 aa27.59■■■□□ 2.01
HMGA2-203ENST00000393578 PIP4K2BP78356 416 aa27.59■■■□□ 2.01
HMGA2-203ENST00000393578 PNMA6EA0A0J9YXQ4 647 aa27.58■■■□□ 2.01
HMGA2-203ENST00000393578 DDRGK1Q96HY6 314 aa27.58■■■□□ 2.01
HMGA2-203ENST00000393578 NBPF7P0C2Y1 421 aaPredicted RBP27.57■■■□□ 2
HMGA2-203ENST00000393578 MYL6BP14649 208 aa27.57■■■□□ 2
HMGA2-203ENST00000393578 AIMP1Q12904 312 aaKnown RBP27.57■■■□□ 2
HMGA2-203ENST00000393578 LINS1Q8NG48 757 aa27.57■■■□□ 2
HMGA2-203ENST00000393578 LRP10Q7Z4F1 713 aa27.57■■■□□ 2
HMGA2-203ENST00000393578 PLEKHM2Q8IWE5 1019 aa27.57■■■□□ 2
HMGA2-203ENST00000393578 UPF2Q9HAU5 1272 aaKnown RBP27.57■■■□□ 2
HMGA2-203ENST00000393578 TOGARAM1Q9Y4F4 1720 aa27.56■■■□□ 2
HMGA2-203ENST00000393578 KCPQ6ZWJ8 1503 aa27.56■■■□□ 2
HMGA2-203ENST00000393578 ERBB4Q15303 1308 aa27.56■■■□□ 2
HMGA2-203ENST00000393578 ADAMTS2O95450 1211 aa27.55■■■□□ 2
HMGA2-203ENST00000393578 XAGE3Q8WTP9 111 aa27.55■■■□□ 2
HMGA2-203ENST00000393578 NOP58Q9Y2X3 529 aaKnown RBP27.55■■■□□ 2
HMGA2-203ENST00000393578 TNS2Q63HR2 1409 aa27.55■■■□□ 2
HMGA2-203ENST00000393578 IBTKQ9P2D0 1353 aaPredicted RBP27.55■■■□□ 2
HMGA2-203ENST00000393578 COPS6Q7L5N1 327 aa27.55■■■□□ 2
HMGA2-203ENST00000393578 SSH3Q8TE77 659 aa27.55■■■□□ 2
HMGA2-203ENST00000393578 TMOD3Q9NYL9 352 aa27.55■■■□□ 2
HMGA2-203ENST00000393578 HDAC5Q9UQL6 1122 aa27.55■■■□□ 2
HMGA2-203ENST00000393578 NRAPQ86VF7 1730 aa27.54■■■□□ 2
HMGA2-203ENST00000393578 RIC3Q7Z5B4 369 aa27.54■■■□□ 2
HMGA2-203ENST00000393578 WNK3Q9BYP7 1800 aa27.54■■■□□ 2
HMGA2-203ENST00000393578 APBB1O00213 710 aa27.53■■■□□ 2
HMGA2-203ENST00000393578 C9orf78Q9NZ63 289 aaPredicted RBP27.53■■■□□ 2
HMGA2-203ENST00000393578 EXOC6BQ9Y2D4 811 aa27.52■■■□□ 2
HMGA2-203ENST00000393578 SMARCA5O60264 1052 aaPredicted RBP27.51■■■□□ 2
HMGA2-203ENST00000393578 POLA2Q14181 598 aa27.51■■■□□ 2
HMGA2-203ENST00000393578 CWF19L2Q2TBE0 894 aaKnown RBP27.51■■■□□ 2
HMGA2-203ENST00000393578 C16orf71Q8IYS4 520 aaPredicted RBP27.51■■■□□ 2
HMGA2-203ENST00000393578 CDCA7Q9BWT1 371 aaPredicted RBP27.51■■■□□ 2
HMGA2-203ENST00000393578 EXOC5O00471 708 aa27.51■■□□□ 1.99
HMGA2-203ENST00000393578 NEXNQ0ZGT2 675 aa27.51■■□□□ 1.99
HMGA2-203ENST00000393578 ANKRD13DQ6ZTN6 518 aa27.51■■□□□ 1.99
HMGA2-203ENST00000393578 PPP1R42Q7Z4L9 355 aa27.51■■□□□ 1.99
HMGA2-203ENST00000393578 UBAP1LF5GYI3 381 aa27.5■■□□□ 1.99
HMGA2-203ENST00000393578 LRRCC1Q9C099 1032 aa27.5■■□□□ 1.99
HMGA2-203ENST00000393578 THRAP3Q9Y2W1 955 aaKnown RBP27.5■■□□□ 1.99
HMGA2-203ENST00000393578 ERICH6Q7L0X2 663 aa27.49■■□□□ 1.99
HMGA2-203ENST00000393578 METTL22Q9BUU2 404 aaPredicted RBP27.49■■□□□ 1.99
HMGA2-203ENST00000393578 UTYO14607 1347 aa27.49■■□□□ 1.99
HMGA2-203ENST00000393578 LRP6O75581 1613 aa27.48■■□□□ 1.99
HMGA2-203ENST00000393578 SPATA31A1Q5TZJ5 1347 aa27.48■■□□□ 1.99
HMGA2-203ENST00000393578 NUTM2BA6NNL0 878 aaPredicted RBP27.48■■□□□ 1.99
HMGA2-203ENST00000393578 NUTM2EB1AL46 878 aaPredicted RBP27.48■■□□□ 1.99
HMGA2-203ENST00000393578 PTCD1O75127 700 aaKnown RBP27.48■■□□□ 1.99
HMGA2-203ENST00000393578 NUTM2AQ8IVF1 878 aaPredicted RBP27.48■■□□□ 1.99
HMGA2-203ENST00000393578 GRM8O00222 908 aa27.48■■□□□ 1.99
HMGA2-203ENST00000393578 SRGAP3O43295 1099 aa27.48■■□□□ 1.99
HMGA2-203ENST00000393578 MTX1Q13505 466 aa27.48■■□□□ 1.99
HMGA2-203ENST00000393578 TBC1D32Q96NH3 1257 aa27.48■■□□□ 1.99
HMGA2-203ENST00000393578 IGKV5-2P06315 115 aa27.47■■□□□ 1.99
HMGA2-203ENST00000393578 PIP4K2AP48426 406 aaPredicted RBP27.47■■□□□ 1.99
HMGA2-203ENST00000393578 TTC22Q5TAA0 569 aa27.47■■□□□ 1.99
HMGA2-203ENST00000393578 OTUD7AQ8TE49 926 aaPredicted RBP27.47■■□□□ 1.99
HMGA2-203ENST00000393578 PIGBQ92521 554 aa27.47■■□□□ 1.99
HMGA2-203ENST00000393578 NWD2Q9ULI1 1742 aa27.46■■□□□ 1.99
HMGA2-203ENST00000393578 GSPT1P15170 499 aaKnown RBP27.46■■□□□ 1.99
HMGA2-203ENST00000393578 NEURL1BA8MQ27 555 aa27.45■■□□□ 1.98
HMGA2-203ENST00000393578 NBPF26B4DH59 902 aa27.45■■□□□ 1.98
HMGA2-203ENST00000393578 RAB11FIP3O75154 756 aa27.45■■□□□ 1.98
HMGA2-203ENST00000393578 NBPF14Q5TI25 921 aa27.45■■□□□ 1.98
HMGA2-203ENST00000393578 NBPF10Q6P3W6 841 aaKnown RBP27.45■■□□□ 1.98
HMGA2-203ENST00000393578 NBPF15Q8N660 670 aa27.45■■□□□ 1.98
HMGA2-203ENST00000393578 BCL11AQ9H165 835 aa27.45■■□□□ 1.98
HMGA2-203ENST00000393578 OSBPL3Q9H4L5 887 aa27.44■■□□□ 1.98
HMGA2-203ENST00000393578 SLIT2O94813 1529 aa27.44■■□□□ 1.98
HMGA2-203ENST00000393578 ITGB4P16144 1822 aa27.44■■□□□ 1.98
HMGA2-203ENST00000393578 VSIG10Q8N0Z9 540 aa27.44■■□□□ 1.98
HMGA2-203ENST00000393578 PLBD2Q8NHP8 589 aa27.44■■□□□ 1.98
HMGA2-203ENST00000393578 MYD88Q99836 296 aa27.43■■□□□ 1.98
HMGA2-203ENST00000393578 GCKRQ14397 625 aa27.42■■□□□ 1.98
HMGA2-203ENST00000393578 TEX13AQ9BXU3 409 aaPredicted RBP27.42■■□□□ 1.98
HMGA2-203ENST00000393578 ASAP1Q9ULH1 1129 aa27.42■■□□□ 1.98
HMGA2-203ENST00000393578 BCL9O00512 1426 aa27.42■■□□□ 1.98
HMGA2-203ENST00000393578 SURF6O75683 361 aaKnown RBP27.42■■□□□ 1.98
HMGA2-203ENST00000393578 MFAP1P55081 439 aaKnown RBP27.42■■□□□ 1.98
HMGA2-203ENST00000393578 ATG3Q9NT62 314 aa27.42■■□□□ 1.98
HMGA2-203ENST00000393578 ARFGEF2Q9Y6D5 1785 aa27.42■■□□□ 1.98
HMGA2-203ENST00000393578 SPATA31A5Q5VU36 1347 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms