RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 HS1BP3Q53T59 392 aa22.88■■□□□ 1.25
CBX1-202ENST00000393408 NOL8Q76FK4 1167 aaKnown RBP22.88■■□□□ 1.25
CBX1-202ENST00000393408 HSPA4P34932 840 aa22.87■■□□□ 1.25
CBX1-202ENST00000393408 UPF3BQ9BZI7 483 aaKnown RBP22.87■■□□□ 1.25
CBX1-202ENST00000393408 SURF6O75683 361 aaKnown RBP22.87■■□□□ 1.25
CBX1-202ENST00000393408 USHBP1Q8N6Y0 703 aa22.87■■□□□ 1.25
CBX1-202ENST00000393408 PI4K2BQ8TCG2 481 aa22.87■■□□□ 1.25
CBX1-202ENST00000393408 KDM3BQ7LBC6 1761 aa22.86■■□□□ 1.25
CBX1-202ENST00000393408 SYCE3A1L190 88 aa22.86■■□□□ 1.25
CBX1-202ENST00000393408 RHPN1Q8TCX5 695 aa22.86■■□□□ 1.25
CBX1-202ENST00000393408 THEMISQ8N1K5 641 aaPredicted RBP22.85■■□□□ 1.25
CBX1-202ENST00000393408 KCNA6P17658 529 aa22.84■■□□□ 1.25
CBX1-202ENST00000393408 MSNP26038 577 aaKnown RBP22.83■■□□□ 1.25
CBX1-202ENST00000393408 EIF4A1P60842 406 aaKnown RBP22.83■■□□□ 1.25
CBX1-202ENST00000393408 CRYBG1Q9Y4K1 1723 aa22.83■■□□□ 1.25
CBX1-202ENST00000393408 SRGAP3O43295 1099 aa22.83■■□□□ 1.25
CBX1-202ENST00000393408 PLEKHG5O94827 1062 aa22.83■■□□□ 1.25
CBX1-202ENST00000393408 KIF1BPQ96EK5 621 aa22.83■■□□□ 1.25
CBX1-202ENST00000393408 RAD50Q92878 1312 aa22.83■■□□□ 1.24
CBX1-202ENST00000393408 SGSM2O43147 1006 aa22.82■■□□□ 1.24
CBX1-202ENST00000393408 MAP4K4O95819 1239 aaPredicted RBP22.82■■□□□ 1.24
CBX1-202ENST00000393408 HOXB7P09629 217 aa22.82■■□□□ 1.24
CBX1-202ENST00000393408 NBPF7P0C2Y1 421 aaPredicted RBP22.82■■□□□ 1.24
CBX1-202ENST00000393408 EIF2S2P20042 333 aaKnown RBP22.82■■□□□ 1.24
CBX1-202ENST00000393408 BEND3Q5T5X7 828 aa22.82■■□□□ 1.24
CBX1-202ENST00000393408 IP6K1Q92551 441 aa22.81■■□□□ 1.24
CBX1-202ENST00000393408 CHPF2Q9P2E5 772 aa22.81■■□□□ 1.24
CBX1-202ENST00000393408 FER1L4A9Z1Z3 1794 aa22.81■■□□□ 1.24
CBX1-202ENST00000393408 PLPPR3Q6T4P5 718 aa22.8■■□□□ 1.24
CBX1-202ENST00000393408 DNAAF4Q8WXU2 420 aa22.8■■□□□ 1.24
CBX1-202ENST00000393408 LGR6Q9HBX8 967 aa22.8■■□□□ 1.24
CBX1-202ENST00000393408 NOL7Q9UMY1 257 aaKnown RBP22.8■■□□□ 1.24
CBX1-202ENST00000393408 NFAT5O94916 1531 aa22.8■■□□□ 1.24
CBX1-202ENST00000393408 LSG1Q9H089 658 aaKnown RBP22.8■■□□□ 1.24
CBX1-202ENST00000393408 WDR33Q9C0J8 1336 aaKnown RBP22.8■■□□□ 1.24
CBX1-202ENST00000393408 OFD1O75665 1012 aa22.79■■□□□ 1.24
CBX1-202ENST00000393408 UBE2Q2Q8WVN8 375 aa22.79■■□□□ 1.24
CBX1-202ENST00000393408 LMO7Q8WWI1 1683 aa22.79■■□□□ 1.24
CBX1-202ENST00000393408 USP42Q9H9J4 1324 aaKnown RBP22.79■■□□□ 1.24
CBX1-202ENST00000393408 NBPF6Q5VWK0 638 aa22.79■■□□□ 1.24
CBX1-202ENST00000393408 CNTROBQ8N137 903 aa22.79■■□□□ 1.24
CBX1-202ENST00000393408 NBPF4Q96M43 638 aa22.79■■□□□ 1.24
CBX1-202ENST00000393408 SNX14Q9Y5W7 946 aa22.79■■□□□ 1.24
CBX1-202ENST00000393408 PI4KAP2A4QPH2 592 aa22.78■■□□□ 1.24
CBX1-202ENST00000393408 C14orf37Q86TY3 774 aa22.78■■□□□ 1.24
CBX1-202ENST00000393408 PI4KAP1Q8N8J0 262 aa22.78■■□□□ 1.24
CBX1-202ENST00000393408 TPM2P07951 284 aa22.78■■□□□ 1.24
CBX1-202ENST00000393408 TTC14Q96N46 770 aa22.78■■□□□ 1.24
CBX1-202ENST00000393408 CHMP4AQ9BY43 222 aa22.78■■□□□ 1.24
CBX1-202ENST00000393408 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.78■■□□□ 1.24
CBX1-202ENST00000393408 RPAP1Q9BWH6 1393 aaPredicted RBP22.77■■□□□ 1.24
CBX1-202ENST00000393408 HSP90AB4PQ58FF6 505 aa22.77■■□□□ 1.24
CBX1-202ENST00000393408 RGPD2P0DJD1 1756 aa22.77■■□□□ 1.24
CBX1-202ENST00000393408 ADCY9O60503 1353 aa22.77■■□□□ 1.24
CBX1-202ENST00000393408 TCHHQ07283 1943 aa22.77■■□□□ 1.24
CBX1-202ENST00000393408 KCNQ3O43525 872 aa22.77■■□□□ 1.24
CBX1-202ENST00000393408 SYAP1Q96A49 352 aaPredicted RBP22.77■■□□□ 1.24
CBX1-202ENST00000393408 PHF8Q9UPP1 1060 aa22.77■■□□□ 1.24
CBX1-202ENST00000393408 SETD1BQ9UPS6 1966 aaKnown RBP22.77■■□□□ 1.23
CBX1-202ENST00000393408 KIAA1211Q6ZU35 1233 aa22.76■■□□□ 1.23
CBX1-202ENST00000393408 GADD45BO75293 160 aaPredicted RBP22.75■■□□□ 1.23
CBX1-202ENST00000393408 RASEFQ8IZ41 740 aa22.75■■□□□ 1.23
CBX1-202ENST00000393408 TSPY26PQ9H489 355 aa22.75■■□□□ 1.23
CBX1-202ENST00000393408 TTC41PQ6P2S7 1318 aa22.75■■□□□ 1.23
CBX1-202ENST00000393408 ZNF500O60304 480 aaPredicted RBP22.74■■□□□ 1.23
CBX1-202ENST00000393408 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.74■■□□□ 1.23
CBX1-202ENST00000393408 USP48Q86UV5 1035 aa22.74■■□□□ 1.23
CBX1-202ENST00000393408 GDPD2Q9HCC8 539 aa22.74■■□□□ 1.23
CBX1-202ENST00000393408 PHRF1Q9P1Y6 1649 aaKnown RBP22.73■■□□□ 1.23
CBX1-202ENST00000393408 MTX1Q13505 466 aa22.73■■□□□ 1.23
CBX1-202ENST00000393408 FOXD4L6Q3SYB3 417 aaPredicted RBP22.73■■□□□ 1.23
CBX1-202ENST00000393408 FOXD4L3Q6VB84 417 aaPredicted RBP22.73■■□□□ 1.23
CBX1-202ENST00000393408 TMEM87AQ8NBN3 555 aa22.73■■□□□ 1.23
CBX1-202ENST00000393408 ANXA1P04083 346 aa22.73■■□□□ 1.23
CBX1-202ENST00000393408 AK2P54819 239 aa22.73■■□□□ 1.23
CBX1-202ENST00000393408 RNF214Q8ND24 703 aa22.73■■□□□ 1.23
CBX1-202ENST00000393408 RRP9O43818 475 aaKnown RBP22.72■■□□□ 1.23
CBX1-202ENST00000393408 GLRX3O76003 335 aaKnown RBP22.72■■□□□ 1.23
CBX1-202ENST00000393408 CWC27Q6UX04 472 aaKnown RBP22.72■■□□□ 1.23
CBX1-202ENST00000393408 ZKSCAN5Q9Y2L8 839 aa22.72■■□□□ 1.23
CBX1-202ENST00000393408 TEFQ10587 303 aa22.72■■□□□ 1.23
CBX1-202ENST00000393408 AKAP4Q5JQC9 854 aa22.72■■□□□ 1.23
CBX1-202ENST00000393408 RUFY3Q7L099 469 aa22.72■■□□□ 1.23
CBX1-202ENST00000393408 LIMCH1Q9UPQ0 1083 aa22.72■■□□□ 1.23
CBX1-202ENST00000393408 BTBD11A6QL63 1104 aa22.71■■□□□ 1.23
CBX1-202ENST00000393408 PHF14O94880 888 aa22.71■■□□□ 1.23
CBX1-202ENST00000393408 ZNF530Q6P9A1 599 aaPredicted RBP22.71■■□□□ 1.23
CBX1-202ENST00000393408 SPG7Q9UQ90 795 aa22.71■■□□□ 1.23
CBX1-202ENST00000393408 ADGRL3Q9HAR2 1447 aa22.71■■□□□ 1.23
CBX1-202ENST00000393408 MCM5P33992 734 aa22.7■■□□□ 1.22
CBX1-202ENST00000393408 OS9Q13438 667 aaPredicted RBP22.7■■□□□ 1.22
CBX1-202ENST00000393408 CCDC39Q9UFE4 941 aa22.7■■□□□ 1.22
CBX1-202ENST00000393408 ZSCAN22P10073 491 aaPredicted RBP22.7■■□□□ 1.22
CBX1-202ENST00000393408 HSP90AA2PQ14568 343 aaPredicted RBP22.7■■□□□ 1.22
CBX1-202ENST00000393408 DBF4Q9UBU7 674 aaPredicted RBP22.7■■□□□ 1.22
CBX1-202ENST00000393408 CHD2O14647 1828 aaKnown RBP22.7■■□□□ 1.22
CBX1-202ENST00000393408 DIAPH3Q9NSV4 1193 aa22.69■■□□□ 1.22
CBX1-202ENST00000393408 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.69■■□□□ 1.22
CBX1-202ENST00000393408 ALDH1L1O75891 902 aa22.68■■□□□ 1.22
CBX1-202ENST00000393408 TERF1P54274 439 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms