RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 COL5A3P25940 1745 aaPredicted RBP27.14■■□□□ 1.94
CDCA4-202ENST00000392590 CICQ96RK0 1608 aaPredicted RBP27.14■■□□□ 1.93
CDCA4-202ENST00000392590 RFC4P35249 363 aa27.13■■□□□ 1.93
CDCA4-202ENST00000392590 SGIP1Q9BQI5 828 aa27.13■■□□□ 1.93
CDCA4-202ENST00000392590 ZBTB1Q9Y2K1 713 aa27.13■■□□□ 1.93
CDCA4-202ENST00000392590 USP16Q9Y5T5 823 aa27.13■■□□□ 1.93
CDCA4-202ENST00000392590 PRAMEF22A3QJZ6 481 aa27.12■■□□□ 1.93
CDCA4-202ENST00000392590 CANXP27824 592 aaKnown RBP27.12■■□□□ 1.93
CDCA4-202ENST00000392590 POLD1P28340 1107 aa27.12■■□□□ 1.93
CDCA4-202ENST00000392590 EIF4A1P60842 406 aaKnown RBP27.12■■□□□ 1.93
CDCA4-202ENST00000392590 MSL1Q68DK7 614 aa27.12■■□□□ 1.93
CDCA4-202ENST00000392590 LAS1LQ9Y4W2 734 aaKnown RBP27.12■■□□□ 1.93
CDCA4-202ENST00000392590 SENP3-EIF4A1A0A087X0R7 540 aa27.11■■□□□ 1.93
CDCA4-202ENST00000392590 UBR3Q6ZT12 1888 aa27.11■■□□□ 1.93
CDCA4-202ENST00000392590 CCER2I3L3R5 266 aa27.1■■□□□ 1.93
CDCA4-202ENST00000392590 CHL1O00533 1208 aa27.1■■□□□ 1.93
CDCA4-202ENST00000392590 SOS1Q07889 1333 aaPredicted RBP27.1■■□□□ 1.93
CDCA4-202ENST00000392590 A1BGP04217 495 aa27.09■■□□□ 1.93
CDCA4-202ENST00000392590 CALD1Q05682 793 aaKnown RBP27.09■■□□□ 1.93
CDCA4-202ENST00000392590 GIGYF1O75420 1035 aaPredicted RBP27.08■■□□□ 1.93
CDCA4-202ENST00000392590 ARXQ96QS3 562 aa27.08■■□□□ 1.93
CDCA4-202ENST00000392590 MYH14Q7Z406 1995 aaKnown RBP27.07■■□□□ 1.92
CDCA4-202ENST00000392590 CFAP44Q96MT7 982 aa27.07■■□□□ 1.92
CDCA4-202ENST00000392590 CCDC27Q2M243 656 aa27.06■■□□□ 1.92
CDCA4-202ENST00000392590 EIF5P55010 431 aaKnown RBP27.05■■□□□ 1.92
CDCA4-202ENST00000392590 NCBP3Q53F19 620 aaKnown RBP27.05■■□□□ 1.92
CDCA4-202ENST00000392590 NLGN1Q8N2Q7 840 aa27.05■■□□□ 1.92
CDCA4-202ENST00000392590 IL6STP40189 918 aaPredicted RBP27.04■■□□□ 1.92
CDCA4-202ENST00000392590 NPM2Q86SE8 214 aaKnown RBP27.04■■□□□ 1.92
CDCA4-202ENST00000392590 SRP68Q9UHB9 627 aaKnown RBP27.04■■□□□ 1.92
CDCA4-202ENST00000392590 ZNF330Q9Y3S2 320 aaPredicted RBP27.04■■□□□ 1.92
CDCA4-202ENST00000392590 COL15A1P39059 1388 aa27.03■■□□□ 1.92
CDCA4-202ENST00000392590 USP42Q9H9J4 1324 aaKnown RBP27.03■■□□□ 1.92
CDCA4-202ENST00000392590 ZPR1O75312 459 aa27.03■■□□□ 1.92
CDCA4-202ENST00000392590 GYS1P13807 737 aa27.03■■□□□ 1.92
CDCA4-202ENST00000392590 WWC1Q8IX03 1113 aa27.03■■□□□ 1.92
CDCA4-202ENST00000392590 IFT57Q9NWB7 429 aa27.03■■□□□ 1.92
CDCA4-202ENST00000392590 KDM3BQ7LBC6 1761 aa27.02■■□□□ 1.92
CDCA4-202ENST00000392590 A0A087WZG4 1122 aa27.02■■□□□ 1.92
CDCA4-202ENST00000392590 GNAI1P63096 354 aa27.02■■□□□ 1.92
CDCA4-202ENST00000392590 SALL2Q9Y467 1007 aaPredicted RBP27.02■■□□□ 1.92
CDCA4-202ENST00000392590 ZNF853P0CG23 659 aa27.01■■□□□ 1.91
CDCA4-202ENST00000392590 PIP4K2AP48426 406 aaPredicted RBP27.01■■□□□ 1.91
CDCA4-202ENST00000392590 MIER1Q8N108 512 aa27.01■■□□□ 1.91
CDCA4-202ENST00000392590 USPL1Q5W0Q7 1092 aa27■■□□□ 1.91
CDCA4-202ENST00000392590 MBIPQ9NS73 344 aa27■■□□□ 1.91
CDCA4-202ENST00000392590 NARFQ9UHQ1 456 aa27■■□□□ 1.91
CDCA4-202ENST00000392590 FHDC1Q9C0D6 1143 aaPredicted RBP26.99■■□□□ 1.91
CDCA4-202ENST00000392590 NBPF26B4DH59 902 aa26.98■■□□□ 1.91
CDCA4-202ENST00000392590 MMP10P09238 476 aa26.98■■□□□ 1.91
CDCA4-202ENST00000392590 NBPF10Q6P3W6 841 aaKnown RBP26.98■■□□□ 1.91
CDCA4-202ENST00000392590 NBPF15Q8N660 670 aa26.98■■□□□ 1.91
CDCA4-202ENST00000392590 FKBP8Q14318 412 aa26.97■■□□□ 1.91
CDCA4-202ENST00000392590 TBC1D2BQ9UPU7 963 aa26.97■■□□□ 1.91
CDCA4-202ENST00000392590 EIF2S2P20042 333 aaKnown RBP26.96■■□□□ 1.91
CDCA4-202ENST00000392590 KRT24Q2M2I5 525 aa26.96■■□□□ 1.91
CDCA4-202ENST00000392590 KLHL34Q8N239 644 aa26.96■■□□□ 1.91
CDCA4-202ENST00000392590 NGEFQ8N5V2 710 aa26.96■■□□□ 1.91
CDCA4-202ENST00000392590 COL24A1Q17RW2 1714 aa26.95■■□□□ 1.9
CDCA4-202ENST00000392590 SYT17Q9BSW7 474 aa26.95■■□□□ 1.9
CDCA4-202ENST00000392590 DZIP3Q86Y13 1208 aaKnown RBP26.94■■□□□ 1.9
CDCA4-202ENST00000392590 WDR63Q8IWG1 891 aa26.93■■□□□ 1.9
CDCA4-202ENST00000392590 BCL2L12Q9HB09 334 aa26.92■■□□□ 1.9
CDCA4-202ENST00000392590 PARP3Q9Y6F1 533 aa26.92■■□□□ 1.9
CDCA4-202ENST00000392590 IL16Q14005 1332 aa26.92■■□□□ 1.9
CDCA4-202ENST00000392590 ERBB4Q15303 1308 aa26.92■■□□□ 1.9
CDCA4-202ENST00000392590 C4AP0C0L4 1744 aa26.92■■□□□ 1.9
CDCA4-202ENST00000392590 MYL6BP14649 208 aa26.91■■□□□ 1.9
CDCA4-202ENST00000392590 HOXB7P09629 217 aa26.9■■□□□ 1.9
CDCA4-202ENST00000392590 DUSP27Q5VZP5 1158 aa26.9■■□□□ 1.9
CDCA4-202ENST00000392590 NECTIN2Q92692 538 aa26.9■■□□□ 1.9
CDCA4-202ENST00000392590 CAMTA2O94983 1202 aa26.9■■□□□ 1.9
CDCA4-202ENST00000392590 TM4SF1P30408 202 aa26.9■■□□□ 1.9
CDCA4-202ENST00000392590 TSR2Q969E8 191 aaKnown RBP26.89■■□□□ 1.89
CDCA4-202ENST00000392590 NFIXQ14938 502 aa26.88■■□□□ 1.89
CDCA4-202ENST00000392590 CD2APQ9Y5K6 639 aa26.88■■□□□ 1.89
CDCA4-202ENST00000392590 ELL2O00472 640 aaPredicted RBP26.87■■□□□ 1.89
CDCA4-202ENST00000392590 DDR1Q08345 913 aa26.87■■□□□ 1.89
CDCA4-202ENST00000392590 PDIA6Q15084 440 aa26.87■■□□□ 1.89
CDCA4-202ENST00000392590 HDGFL1Q5TGJ6 251 aa26.87■■□□□ 1.89
CDCA4-202ENST00000392590 LAMB4A4D0S4 1761 aa26.86■■□□□ 1.89
CDCA4-202ENST00000392590 C8orf58Q8NAV2 365 aa26.86■■□□□ 1.89
CDCA4-202ENST00000392590 BICDL1Q6ZP65 573 aa26.85■■□□□ 1.89
CDCA4-202ENST00000392590 POLRMTO00411 1230 aaKnown RBP26.85■■□□□ 1.89
CDCA4-202ENST00000392590 TBC1D9BQ66K14 1250 aa26.85■■□□□ 1.89
CDCA4-202ENST00000392590 PROSER3Q2NL68 480 aa26.84■■□□□ 1.89
CDCA4-202ENST00000392590 CLEC4GQ6UXB4 293 aa26.84■■□□□ 1.89
CDCA4-202ENST00000392590 DDX21Q9NR30 783 aaKnown RBP eCLIP26.84■■□□□ 1.89
CDCA4-202ENST00000392590 ZNF652Q9Y2D9 606 aa26.84■■□□□ 1.89
CDCA4-202ENST00000392590 ANXA1P04083 346 aa26.83■■□□□ 1.89
CDCA4-202ENST00000392590 KIF6Q6ZMV9 814 aa26.83■■□□□ 1.89
CDCA4-202ENST00000392590 NLGN2Q8NFZ4 835 aa26.83■■□□□ 1.89
CDCA4-202ENST00000392590 TTLL7Q6ZT98 887 aa26.82■■□□□ 1.88
CDCA4-202ENST00000392590 LRP10Q7Z4F1 713 aa26.82■■□□□ 1.88
CDCA4-202ENST00000392590 RGL2O15211 777 aa26.81■■□□□ 1.88
CDCA4-202ENST00000392590 CHPF2Q9P2E5 772 aa26.81■■□□□ 1.88
CDCA4-202ENST00000392590 DBF4Q9UBU7 674 aaPredicted RBP26.81■■□□□ 1.88
CDCA4-202ENST00000392590 ZNF521Q96K83 1311 aa26.81■■□□□ 1.88
CDCA4-202ENST00000392590 FANCIQ9NVI1 1328 aa26.81■■□□□ 1.88
CDCA4-202ENST00000392590 ERVV-1B6SEH8 477 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms