RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 CCDC30Q5VVM6 783 aa16.82■□□□□ 0.28
CCDC57-203ENST00000392343 CCDC83Q8IWF9 413 aa16.82■□□□□ 0.28
CCDC57-203ENST00000392343 EYA1Q99502 592 aa16.82■□□□□ 0.28
CCDC57-203ENST00000392343 DNM1Q05193 864 aaKnown RBP16.81■□□□□ 0.28
CCDC57-203ENST00000392343 ZNF710Q8N1W2 664 aa16.81■□□□□ 0.28
CCDC57-203ENST00000392343 SMC3Q9UQE7 1217 aa16.81■□□□□ 0.28
CCDC57-203ENST00000392343 RICTORQ6R327 1708 aa16.81■□□□□ 0.28
CCDC57-203ENST00000392343 CASTP20810 708 aaKnown RBP16.81■□□□□ 0.28
CCDC57-203ENST00000392343 NUTM2GQ5VZR2 741 aa16.8■□□□□ 0.28
CCDC57-203ENST00000392343 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
CCDC57-203ENST00000392343 EIF2S2P20042 333 aaKnown RBP16.8■□□□□ 0.28
CCDC57-203ENST00000392343 AMPHP49418 695 aa16.8■□□□□ 0.28
CCDC57-203ENST00000392343 FAM184AQ8NB25 1140 aa16.8■□□□□ 0.28
CCDC57-203ENST00000392343 ZHX1Q9UKY1 873 aaPredicted RBP16.8■□□□□ 0.28
CCDC57-203ENST00000392343 KDM4AO75164 1064 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 F13A1P00488 732 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 CBX1P83916 185 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 SGSM2O43147 1006 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 SRGAP3O43295 1099 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 UBE2HP62256 183 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 UVSSAQ2YD98 709 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 PI4K2BQ8TCG2 481 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 RHPN1Q8TCX5 695 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 VPS37CA5D8V6 355 aaPredicted RBP16.79■□□□□ 0.28
CCDC57-203ENST00000392343 TTC14Q96N46 770 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 LIMCH1Q9UPQ0 1083 aa16.79■□□□□ 0.28
CCDC57-203ENST00000392343 GJB2P29033 226 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 ADCK5Q3MIX3 580 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 LSG1Q9H089 658 aaKnown RBP16.78■□□□□ 0.28
CCDC57-203ENST00000392343 PYCARDQ9ULZ3 195 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 C3P01024 1663 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 RAD50Q92878 1312 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 MON2Q7Z3U7 1717 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 PEAK1Q9H792 1746 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 NBPF7P0C2Y1 421 aaPredicted RBP16.78■□□□□ 0.28
CCDC57-203ENST00000392343 FAM173BQ6P4H8 233 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 MTERF4Q7Z6M4 381 aaKnown RBP16.78■□□□□ 0.28
CCDC57-203ENST00000392343 NECAB1Q8N987 351 aa16.78■□□□□ 0.28
CCDC57-203ENST00000392343 SOS1Q07889 1333 aaPredicted RBP16.78■□□□□ 0.28
CCDC57-203ENST00000392343 CAMK4Q16566 473 aa16.77■□□□□ 0.28
CCDC57-203ENST00000392343 CCDC94Q9BW85 323 aaPredicted RBP16.77■□□□□ 0.28
CCDC57-203ENST00000392343 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.28
CCDC57-203ENST00000392343 SSH2Q76I76 1423 aa16.77■□□□□ 0.27
CCDC57-203ENST00000392343 PLEKHG5O94827 1062 aa16.77■□□□□ 0.27
CCDC57-203ENST00000392343 ANXA1P04083 346 aa16.77■□□□□ 0.27
CCDC57-203ENST00000392343 FERMT3Q86UX7 667 aa16.77■□□□□ 0.27
CCDC57-203ENST00000392343 PTH1RQ03431 593 aa16.76■□□□□ 0.27
CCDC57-203ENST00000392343 SETD1AO15047 1707 aaKnown RBP16.76■□□□□ 0.27
CCDC57-203ENST00000392343 PRPF40BQ6NWY9 871 aaKnown RBP16.76■□□□□ 0.27
CCDC57-203ENST00000392343 TMEM87AQ8NBN3 555 aa16.76■□□□□ 0.27
CCDC57-203ENST00000392343 IL17REQ8NFR9 667 aa16.76■□□□□ 0.27
CCDC57-203ENST00000392343 SSH3Q8TE77 659 aa16.76■□□□□ 0.27
CCDC57-203ENST00000392343 BCL11BQ9C0K0 894 aaPredicted RBP16.76■□□□□ 0.27
CCDC57-203ENST00000392343 KCNF1Q9H3M0 494 aa16.76■□□□□ 0.27
CCDC57-203ENST00000392343 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.76■□□□□ 0.27
CCDC57-203ENST00000392343 TUBGCP6Q96RT7 1819 aa16.76■□□□□ 0.27
CCDC57-203ENST00000392343 COL9A3Q14050 684 aaPredicted RBP16.75■□□□□ 0.27
CCDC57-203ENST00000392343 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 JAKMIP1Q96N16 626 aaKnown RBP16.75■□□□□ 0.27
CCDC57-203ENST00000392343 OS9Q13438 667 aaPredicted RBP16.75■□□□□ 0.27
CCDC57-203ENST00000392343 PPP4R3BQ5MIZ7 849 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 USHBP1Q8N6Y0 703 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 ITSN1Q15811 1721 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 GNAT3A8MTJ3 354 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 CNTROBQ8N137 903 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 PRIMPOLQ96LW4 560 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 KIF3AQ9Y496 699 aa16.75■□□□□ 0.27
CCDC57-203ENST00000392343 NRKQ7Z2Y5 1582 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 TCEANC2Q96MN5 208 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 HYPKQ9NX55 129 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 OVOS2A0A0J9YW53 1432 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 OVOS2Q6IE36 1432 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 ATP2B3Q16720 1220 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 SMAP1Q8IYB5 467 aaPredicted RBP16.74■□□□□ 0.27
CCDC57-203ENST00000392343 FUCA2Q9BTY2 467 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 BCL2L12Q9HB09 334 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 MTMR6Q9Y217 621 aa16.74■□□□□ 0.27
CCDC57-203ENST00000392343 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
CCDC57-203ENST00000392343 CEP170BQ9Y4F5 1589 aaPredicted RBP16.73■□□□□ 0.27
CCDC57-203ENST00000392343 LETM1O95202 739 aaPredicted RBP16.73■□□□□ 0.27
CCDC57-203ENST00000392343 HMGN5P82970 282 aaKnown RBP16.73■□□□□ 0.27
CCDC57-203ENST00000392343 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
CCDC57-203ENST00000392343 AKAP12Q02952 1782 aa16.73■□□□□ 0.27
CCDC57-203ENST00000392343 TAF7Q15545 349 aaPredicted RBP16.72■□□□□ 0.27
CCDC57-203ENST00000392343 IL17RAQ96F46 866 aa16.72■□□□□ 0.27
CCDC57-203ENST00000392343 SLC26A8Q96RN1 970 aa16.72■□□□□ 0.27
CCDC57-203ENST00000392343 NRXN3Q9Y4C0 1643 aa16.72■□□□□ 0.27
CCDC57-203ENST00000392343 CKAP2LQ8IYA6 745 aa16.72■□□□□ 0.27
CCDC57-203ENST00000392343 RIOK3O14730 519 aaKnown RBP16.71■□□□□ 0.27
CCDC57-203ENST00000392343 NGDNQ8NEJ9 315 aaKnown RBP16.71■□□□□ 0.27
CCDC57-203ENST00000392343 KIF1BPQ96EK5 621 aa16.71■□□□□ 0.27
CCDC57-203ENST00000392343 USP6P35125 1406 aa16.71■□□□□ 0.27
CCDC57-203ENST00000392343 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
CCDC57-203ENST00000392343 ST3GAL1Q11201 340 aa16.71■□□□□ 0.27
CCDC57-203ENST00000392343 ME3Q16798 604 aa16.71■□□□□ 0.27
CCDC57-203ENST00000392343 LUZP1Q86V48 1076 aa16.71■□□□□ 0.27
CCDC57-203ENST00000392343 KIAA1524Q8TCG1 905 aa16.71■□□□□ 0.27
CCDC57-203ENST00000392343 SPTLC3Q9NUV7 552 aa16.71■□□□□ 0.27
CCDC57-203ENST00000392343 ATP6V1DQ9Y5K8 247 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms