RNA–Protein interactions for RNA: ENST00000390919.1

RNU6-220P-201, Transcript of RNA, U6 small nuclear 220, pseudogene, humanhuman

BASIC

Gene RNU6-220P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-220P-201ENST00000390919 BRICD5Q6PL45 260 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 CCAR1Q8IX12 1150 aaKnown RBP3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 GAS2L2Q8NHY3 880 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 TRIM52Q96A61 297 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 SRPK1Q96SB4 655 aaKnown RBP3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 OCSTAMPQ9BR26 566 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 TRIM55Q9BYV6 548 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 TMX1Q9H3N1 280 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 RNF19AQ9NV58 838 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 CCDC87Q9NVE4 849 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 EVA1BQ9NVM1 165 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 ZNF358Q9NW07 568 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 CHMP3Q9Y3E7 222 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 PRKAB1Q9Y478 270 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 AK5Q9Y6K8 562 aa3.43□□□□□ -1.86
RNU6-220P-201ENST00000390919 ATAD2Q6PL18 1390 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 ESPNB1AK53 854 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 ENPP3O14638 875 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 PPP1R12BO60237 982 aaPredicted RBP3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 FZD6O60353 706 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 FGRP09769 529 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 SH3BP5LQ7L8J4 393 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 LAPTM4BQ86VI4 370 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 BPHLQ86WA6 291 aaPredicted RBP3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 TICAM2Q86XR7 235 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 PPARGC1BQ86YN6 1023 aaKnown RBP3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 SEPT12Q8IYM1 358 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 PRPF38AQ8NAV1 312 aaKnown RBP3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 UBE2Q2Q8WVN8 375 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 GPRASP2Q96D09 838 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 SETDB2Q96T68 719 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 PCGF6Q9BYE7 350 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 NBPF3Q9H094 633 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 PCDH12Q9NPG4 1184 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 IFT57Q9NWB7 429 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 CHPF2Q9P2E5 772 aa3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 CDV3Q9UKY7 258 aaKnown RBP3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 R3HCC1Q9Y3T6 440 aaKnown RBP3.42□□□□□ -1.86
RNU6-220P-201ENST00000390919 POTEFA5A3E0 1075 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 PEX14O75381 377 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 PARNO95453 639 aaKnown RBP3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 ATF4P18848 351 aaPredicted RBP3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 CHMP4BP1P59074 171 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 RAB15P59190 212 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 RACK1P63244 317 aaKnown RBP3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 DNM1Q05193 864 aaKnown RBP3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 NFX1Q12986 1120 aaKnown RBP3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 PAK2Q13177 524 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 CCDC24Q8N4L8 307 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 MKL1Q969V6 931 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 LRCH3Q96II8 777 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 CSRNP1Q96S65 589 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 NEUROD4Q9HD90 331 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 SIRPGQ9P1W8 387 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 BCCIPQ9P287 314 aaKnown RBP eCLIP3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 PCDHB3Q9Y5E6 796 aa3.41□□□□□ -1.86
RNU6-220P-201ENST00000390919 CCDC194A0A1B0GVG4 234 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 CDC45O75419 566 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 DXOO77932 396 aaKnown RBP3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 HOXB3P14651 431 aaPredicted RBP3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 MZF1P28698 734 aaPredicted RBP3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 GJA8P48165 433 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 GDF10P55107 478 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 PTPN12Q05209 780 aaKnown RBP3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 PLEKHG6Q3KR16 790 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 ERFEQ4G0M1 354 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 MSS51Q4VC12 460 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 SCUBE3Q8IX30 993 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 TNS4Q8IZW8 715 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 CEP89Q96ST8 783 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 SAP130Q9H0E3 1048 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 UNC93B1Q9H1C4 597 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 TSPAN10Q9H1Z9 355 aaPredicted RBP3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 PCDH10Q9P2E7 1040 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 G3BP2Q9UN86 482 aaKnown RBP3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 POLIQ9UNA4 740 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 FAN1Q9Y2M0 1017 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 ERBB3P21860 1342 aa3.4□□□□□ -1.87
RNU6-220P-201ENST00000390919 GIPC1O14908 333 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 EIF3JO75822 258 aaKnown RBP3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 MAP4K4O95819 1239 aaPredicted RBP3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 CTSHP09668 335 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 PSEN2P49810 448 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 TAF1CQ15572 869 aaPredicted RBP3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 COX20Q5RI15 118 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 ATCAYQ86WG3 371 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 CCDC146Q8IYE0 955 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 GJD3Q8N144 294 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 EDEM1Q92611 657 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 SEC16BQ96JE7 1060 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 ZFRQ96KR1 1074 aaKnown RBP3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 SLC4A5Q9BY07 1137 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 IRF2BPLQ9H1B7 796 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 DNAJC25Q9H1X3 360 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 SRA1Q9HD15 236 aaKnown RBP3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 SLC52A1Q9NWF4 448 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 DDX56Q9NY93 547 aaKnown RBP3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 SERTAD1Q9UHV2 236 aa3.39□□□□□ -1.87
RNU6-220P-201ENST00000390919 TMEM229AB2RXF0 380 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms