RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 CHMP4AQ9BY43 222 aa10.21□□□□□ -0.78
FAM49A-201ENST00000381323 NIP7Q9Y221 180 aaKnown RBP eCLIP10.21□□□□□ -0.78
FAM49A-201ENST00000381323 BTAF1O14981 1849 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 A1BGP04217 495 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 MIS18AQ9NYP9 233 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 CHRNA5P30532 468 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 CALD1Q05682 793 aaKnown RBP10.2□□□□□ -0.78
FAM49A-201ENST00000381323 CCDC24Q8N4L8 307 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 RPGRQ92834 1020 aaKnown RBP10.2□□□□□ -0.78
FAM49A-201ENST00000381323 SGIP1Q9BQI5 828 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 PDZRN3Q9UPQ7 1066 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 USP42Q9H9J4 1324 aaKnown RBP10.2□□□□□ -0.78
FAM49A-201ENST00000381323 PER1O15534 1290 aaPredicted RBP10.2□□□□□ -0.78
FAM49A-201ENST00000381323 PIP4K2AP48426 406 aaPredicted RBP10.2□□□□□ -0.78
FAM49A-201ENST00000381323 C1QTNF8P60827 252 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 NECTIN2Q92692 538 aa10.2□□□□□ -0.78
FAM49A-201ENST00000381323 TCERG1O14776 1098 aaKnown RBP10.19□□□□□ -0.78
FAM49A-201ENST00000381323 YBX3P16989 372 aaKnown RBP eCLIP10.19□□□□□ -0.78
FAM49A-201ENST00000381323 C9orf131Q5VYM1 1079 aa10.19□□□□□ -0.78
FAM49A-201ENST00000381323 CNKSR1Q969H4 720 aa10.19□□□□□ -0.78
FAM49A-201ENST00000381323 COL15A1P39059 1388 aa10.19□□□□□ -0.78
FAM49A-201ENST00000381323 CYP19A1P11511 503 aaPredicted RBP10.19□□□□□ -0.78
FAM49A-201ENST00000381323 AIMP1Q12904 312 aaKnown RBP10.19□□□□□ -0.78
FAM49A-201ENST00000381323 CCDC146Q8IYE0 955 aa10.19□□□□□ -0.78
FAM49A-201ENST00000381323 IL6STP40189 918 aaPredicted RBP10.19□□□□□ -0.78
FAM49A-201ENST00000381323 PLEKHG2Q9H7P9 1386 aa10.19□□□□□ -0.78
FAM49A-201ENST00000381323 CLEC11AQ9Y240 323 aa10.19□□□□□ -0.78
FAM49A-201ENST00000381323 NUP188Q5SRE5 1749 aa10.19□□□□□ -0.78
FAM49A-201ENST00000381323 HTATSF1O43719 755 aaKnown RBP10.18□□□□□ -0.78
FAM49A-201ENST00000381323 NFIXQ14938 502 aa10.18□□□□□ -0.78
FAM49A-201ENST00000381323 IL17REQ8NFR9 667 aa10.18□□□□□ -0.78
FAM49A-201ENST00000381323 PHACTR3Q96KR7 559 aa10.18□□□□□ -0.78
FAM49A-201ENST00000381323 NFE2L2Q16236 605 aa10.18□□□□□ -0.78
FAM49A-201ENST00000381323 SOGA3Q5TF21 947 aa10.18□□□□□ -0.78
FAM49A-201ENST00000381323 NPC1L1Q9UHC9 1359 aa10.18□□□□□ -0.78
FAM49A-201ENST00000381323 DOT1LQ8TEK3 1739 aa10.18□□□□□ -0.78
FAM49A-201ENST00000381323 NYXQ9GZU5 481 aa10.17□□□□□ -0.78
FAM49A-201ENST00000381323 MAP2P11137 1827 aaKnown RBP10.17□□□□□ -0.78
FAM49A-201ENST00000381323 JDP2Q8WYK2 163 aa10.17□□□□□ -0.78
FAM49A-201ENST00000381323 GPTP24298 496 aa10.17□□□□□ -0.78
FAM49A-201ENST00000381323 RSPH6AQ9H0K4 717 aa10.17□□□□□ -0.78
FAM49A-201ENST00000381323 ZBTB3Q9H5J0 574 aa10.16□□□□□ -0.78
FAM49A-201ENST00000381323 SALL2Q9Y467 1007 aaPredicted RBP10.16□□□□□ -0.78
FAM49A-201ENST00000381323 KDRP35968 1356 aa10.16□□□□□ -0.78
FAM49A-201ENST00000381323 HEG1Q9ULI3 1381 aa10.16□□□□□ -0.78
FAM49A-201ENST00000381323 SLC4A9Q96Q91 983 aa10.16□□□□□ -0.78
FAM49A-201ENST00000381323 SOS1Q07889 1333 aaPredicted RBP10.16□□□□□ -0.78
FAM49A-201ENST00000381323 MYBBP1AQ9BQG0 1328 aaKnown RBP10.16□□□□□ -0.78
FAM49A-201ENST00000381323 KDM6AO15550 1401 aaPredicted RBP10.15□□□□□ -0.78
FAM49A-201ENST00000381323 ERFEQ4G0M1 354 aa10.15□□□□□ -0.78
FAM49A-201ENST00000381323 THUMPD2Q9BTF0 503 aaKnown RBP10.15□□□□□ -0.78
FAM49A-201ENST00000381323 PEAK1Q9H792 1746 aa10.15□□□□□ -0.78
FAM49A-201ENST00000381323 INTS5Q6P9B9 1019 aaKnown RBP10.15□□□□□ -0.78
FAM49A-201ENST00000381323 PPP1R42Q7Z4L9 355 aa10.15□□□□□ -0.78
FAM49A-201ENST00000381323 NCAPD2Q15021 1401 aa10.15□□□□□ -0.78
FAM49A-201ENST00000381323 C21orf2O43822 256 aa10.15□□□□□ -0.78
FAM49A-201ENST00000381323 PAXIP1Q6ZW49 1069 aaPredicted RBP10.15□□□□□ -0.78
FAM49A-201ENST00000381323 RREB1Q92766 1687 aa10.15□□□□□ -0.79
FAM49A-201ENST00000381323 USP16Q9Y5T5 823 aa10.15□□□□□ -0.79
FAM49A-201ENST00000381323 ATP10DQ9P241 1426 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 TAOK3Q9H2K8 898 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 HSP90AB3PQ58FF7 597 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 SBF2Q86WG5 1849 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 KCNQ3O43525 872 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 LMNB1P20700 586 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 ALDH1B1P30837 517 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 BRIP1Q9BX63 1249 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 STK31Q9BXU1 1019 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 CARMIL3Q8ND23 1372 aa10.14□□□□□ -0.79
FAM49A-201ENST00000381323 AMIGO3Q86WK7 504 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 RUNDC1Q96C34 613 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 MRS2Q9HD23 443 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 HSP90B1P14625 803 aaKnown RBP10.13□□□□□ -0.79
FAM49A-201ENST00000381323 TBC1D9BQ66K14 1250 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 NEFLP07196 543 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 LMOD1P29536 600 aaPredicted RBP10.13□□□□□ -0.79
FAM49A-201ENST00000381323 DDR1Q08345 913 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 NLRP3Q96P20 1036 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 EIF5P55010 431 aaKnown RBP10.13□□□□□ -0.79
FAM49A-201ENST00000381323 GOLGA2Q08379 1002 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 HDGFL1Q5TGJ6 251 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 MASTLQ96GX5 879 aa10.13□□□□□ -0.79
FAM49A-201ENST00000381323 POLRMTO00411 1230 aaKnown RBP10.12□□□□□ -0.79
FAM49A-201ENST00000381323 EAPPQ56P03 285 aaPredicted RBP10.12□□□□□ -0.79
FAM49A-201ENST00000381323 RGPD2P0DJD1 1756 aa10.12□□□□□ -0.79
FAM49A-201ENST00000381323 CCDC93Q567U6 631 aa10.12□□□□□ -0.79
FAM49A-201ENST00000381323 RIC3Q7Z5B4 369 aa10.12□□□□□ -0.79
FAM49A-201ENST00000381323 ELL2O00472 640 aaPredicted RBP10.12□□□□□ -0.79
FAM49A-201ENST00000381323 EIF6P56537 245 aaKnown RBP10.12□□□□□ -0.79
FAM49A-201ENST00000381323 SRCAPQ6ZRS2 3230 aa10.12□□□□□ -0.79
FAM49A-201ENST00000381323 CLEC4GQ6UXB4 293 aa10.12□□□□□ -0.79
FAM49A-201ENST00000381323 RRAGCQ9HB90 399 aa10.12□□□□□ -0.79
FAM49A-201ENST00000381323 USP54Q70EL1 1684 aa10.11□□□□□ -0.79
FAM49A-201ENST00000381323 DDX58O95786 925 aaKnown RBP10.11□□□□□ -0.79
FAM49A-201ENST00000381323 GJA3Q9Y6H8 435 aa10.11□□□□□ -0.79
FAM49A-201ENST00000381323 VEGFAP15692 232 aaPredicted RBP10.11□□□□□ -0.79
FAM49A-201ENST00000381323 TRMT112Q9UI30 125 aaKnown RBP10.11□□□□□ -0.79
FAM49A-201ENST00000381323 MYOM1P52179 1685 aa10.11□□□□□ -0.79
FAM49A-201ENST00000381323 WNK3Q9BYP7 1800 aa10.11□□□□□ -0.79
FAM49A-201ENST00000381323 RBM17Q96I25 401 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms