RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 RGS12O14924 1447 aa26.05■■□□□ 1.76
TSSC4-203ENST00000380996 ERICH6BQ5W0A0 696 aa26.05■■□□□ 1.76
TSSC4-203ENST00000380996 FTSJ3Q8IY81 847 aaKnown RBP26.05■■□□□ 1.76
TSSC4-203ENST00000380996 PALLDQ8WX93 1383 aa26.05■■□□□ 1.76
TSSC4-203ENST00000380996 TRIM27P14373 513 aa26.04■■□□□ 1.76
TSSC4-203ENST00000380996 DDX21Q9NR30 783 aaKnown RBP eCLIP26.04■■□□□ 1.76
TSSC4-203ENST00000380996 HYPKQ9NX55 129 aa26.04■■□□□ 1.76
TSSC4-203ENST00000380996 ERBB4Q15303 1308 aa26.04■■□□□ 1.76
TSSC4-203ENST00000380996 STARD3NLO95772 234 aa26.04■■□□□ 1.76
TSSC4-203ENST00000380996 DZIP1LQ8IYY4 767 aaKnown RBP26.04■■□□□ 1.76
TSSC4-203ENST00000380996 NHSQ6T4R5 1651 aa26.03■■□□□ 1.76
TSSC4-203ENST00000380996 FLIIQ13045 1269 aa26.03■■□□□ 1.76
TSSC4-203ENST00000380996 C20orf194Q5TEA3 1177 aa26.03■■□□□ 1.76
TSSC4-203ENST00000380996 BRWD3Q6RI45 1802 aa26.02■■□□□ 1.76
TSSC4-203ENST00000380996 LOC102724428A0A0B4J2F2 783 aa26.02■■□□□ 1.76
TSSC4-203ENST00000380996 SIK1P57059 783 aa26.02■■□□□ 1.76
TSSC4-203ENST00000380996 DNAJC10Q8IXB1 793 aa26.01■■□□□ 1.75
TSSC4-203ENST00000380996 CLUAP1Q96AJ1 413 aa26.01■■□□□ 1.75
TSSC4-203ENST00000380996 G2E3Q7L622 706 aa26■■□□□ 1.75
TSSC4-203ENST00000380996 PTF1AQ7RTS3 328 aa25.99■■□□□ 1.75
TSSC4-203ENST00000380996 PANK1Q8TE04 598 aa25.99■■□□□ 1.75
TSSC4-203ENST00000380996 SLC4A9Q96Q91 983 aa25.99■■□□□ 1.75
TSSC4-203ENST00000380996 C5P01031 1676 aa25.99■■□□□ 1.75
TSSC4-203ENST00000380996 ATP6V1AP38606 617 aa25.98■■□□□ 1.75
TSSC4-203ENST00000380996 FKBP5Q13451 457 aaPredicted RBP25.98■■□□□ 1.75
TSSC4-203ENST00000380996 PDIA6Q15084 440 aa25.98■■□□□ 1.75
TSSC4-203ENST00000380996 ANXA1P04083 346 aa25.97■■□□□ 1.75
TSSC4-203ENST00000380996 PROSER3Q2NL68 480 aa25.97■■□□□ 1.75
TSSC4-203ENST00000380996 CRBNQ96SW2 442 aa25.97■■□□□ 1.75
TSSC4-203ENST00000380996 PHAXQ9H814 394 aaKnown RBP25.97■■□□□ 1.75
TSSC4-203ENST00000380996 TNNQ9UQP3 1299 aa25.97■■□□□ 1.75
TSSC4-203ENST00000380996 LAMB4A4D0S4 1761 aa25.96■■□□□ 1.75
TSSC4-203ENST00000380996 CACNA1FO60840 1977 aa25.96■■□□□ 1.75
TSSC4-203ENST00000380996 TRIM37O94972 964 aa25.96■■□□□ 1.75
TSSC4-203ENST00000380996 RLBP1P12271 317 aa25.96■■□□□ 1.75
TSSC4-203ENST00000380996 MYL6BP14649 208 aa25.96■■□□□ 1.75
TSSC4-203ENST00000380996 ABCC4O15439 1325 aa25.95■■□□□ 1.75
TSSC4-203ENST00000380996 CYP19A1P11511 503 aaPredicted RBP25.95■■□□□ 1.74
TSSC4-203ENST00000380996 SBF2Q86WG5 1849 aa25.95■■□□□ 1.74
TSSC4-203ENST00000380996 DDX58O95786 925 aaKnown RBP25.94■■□□□ 1.74
TSSC4-203ENST00000380996 A1BGP04217 495 aa25.94■■□□□ 1.74
TSSC4-203ENST00000380996 COG6Q9Y2V7 657 aa25.94■■□□□ 1.74
TSSC4-203ENST00000380996 EXOC6Q8TAG9 804 aa25.93■■□□□ 1.74
TSSC4-203ENST00000380996 BTAF1O14981 1849 aa25.93■■□□□ 1.74
TSSC4-203ENST00000380996 MVPQ14764 893 aaKnown RBP25.93■■□□□ 1.74
TSSC4-203ENST00000380996 NBPF26B4DH59 902 aa25.92■■□□□ 1.74
TSSC4-203ENST00000380996 NBPF14Q5TI25 921 aa25.92■■□□□ 1.74
TSSC4-203ENST00000380996 NBPF10Q6P3W6 841 aaKnown RBP25.92■■□□□ 1.74
TSSC4-203ENST00000380996 ITPRIPQ8IWB1 547 aa25.92■■□□□ 1.74
TSSC4-203ENST00000380996 TMEM57Q8N5G2 664 aa25.92■■□□□ 1.74
TSSC4-203ENST00000380996 NBPF15Q8N660 670 aa25.92■■□□□ 1.74
TSSC4-203ENST00000380996 LRP10Q7Z4F1 713 aa25.91■■□□□ 1.74
TSSC4-203ENST00000380996 PIP4K2AP48426 406 aaPredicted RBP25.9■■□□□ 1.74
TSSC4-203ENST00000380996 AIMP1Q12904 312 aaKnown RBP25.9■■□□□ 1.74
TSSC4-203ENST00000380996 ITPK1Q13572 414 aa25.9■■□□□ 1.74
TSSC4-203ENST00000380996 COPS6Q7L5N1 327 aa25.9■■□□□ 1.74
TSSC4-203ENST00000380996 XAGE3Q8WTP9 111 aa25.9■■□□□ 1.74
TSSC4-203ENST00000380996 CHMP4BQ9H444 224 aaKnown RBP25.9■■□□□ 1.74
TSSC4-203ENST00000380996 CCNL1Q9UK58 526 aaPredicted RBP25.9■■□□□ 1.74
TSSC4-203ENST00000380996 DDX19BQ9UMR2 479 aa25.9■■□□□ 1.74
TSSC4-203ENST00000380996 AAMPQ13685 434 aa25.89■■□□□ 1.74
TSSC4-203ENST00000380996 INTS3Q68E01 1043 aaKnown RBP25.89■■□□□ 1.74
TSSC4-203ENST00000380996 KSR2Q6VAB6 950 aa25.89■■□□□ 1.74
TSSC4-203ENST00000380996 PI4KAP2A4QPH2 592 aa25.88■■□□□ 1.73
TSSC4-203ENST00000380996 F6X3S4 739 aa25.88■■□□□ 1.73
TSSC4-203ENST00000380996 HMGB2P26583 209 aaKnown RBP25.88■■□□□ 1.73
TSSC4-203ENST00000380996 CCT4P50991 539 aaKnown RBP25.88■■□□□ 1.73
TSSC4-203ENST00000380996 SLC4A10Q6U841 1118 aa25.88■■□□□ 1.73
TSSC4-203ENST00000380996 PI4KAP1Q8N8J0 262 aa25.88■■□□□ 1.73
TSSC4-203ENST00000380996 CCDC87Q9NVE4 849 aa25.88■■□□□ 1.73
TSSC4-203ENST00000380996 ZNF831Q5JPB2 1677 aa25.88■■□□□ 1.73
TSSC4-203ENST00000380996 NPM2Q86SE8 214 aaKnown RBP25.88■■□□□ 1.73
TSSC4-203ENST00000380996 DNAAF4Q8WXU2 420 aa25.88■■□□□ 1.73
TSSC4-203ENST00000380996 CICQ96RK0 1608 aaPredicted RBP25.87■■□□□ 1.73
TSSC4-203ENST00000380996 CRKLP46109 303 aaKnown RBP25.87■■□□□ 1.73
TSSC4-203ENST00000380996 TJP1Q07157 1748 aa25.87■■□□□ 1.73
TSSC4-203ENST00000380996 IL6STP40189 918 aaPredicted RBP25.86■■□□□ 1.73
TSSC4-203ENST00000380996 ANKRD13DQ6ZTN6 518 aa25.86■■□□□ 1.73
TSSC4-203ENST00000380996 RIC3Q7Z5B4 369 aa25.86■■□□□ 1.73
TSSC4-203ENST00000380996 PPP4R2Q9NY27 417 aa25.86■■□□□ 1.73
TSSC4-203ENST00000380996 ZBTB1Q9Y2K1 713 aa25.86■■□□□ 1.73
TSSC4-203ENST00000380996 SLC27A3Q5K4L6 730 aa25.85■■□□□ 1.73
TSSC4-203ENST00000380996 PLSCR1O15162 318 aa25.84■■□□□ 1.73
TSSC4-203ENST00000380996 INTS5Q6P9B9 1019 aaKnown RBP25.84■■□□□ 1.73
TSSC4-203ENST00000380996 MAP3K2Q9Y2U5 619 aa25.84■■□□□ 1.73
TSSC4-203ENST00000380996 ADCY9O60503 1353 aa25.84■■□□□ 1.73
TSSC4-203ENST00000380996 PXDNLA1KZ92 1463 aa25.84■■□□□ 1.73
TSSC4-203ENST00000380996 APBA3O96018 575 aa25.83■■□□□ 1.73
TSSC4-203ENST00000380996 RC3H1Q5TC82 1133 aaKnown RBP25.83■■□□□ 1.73
TSSC4-203ENST00000380996 LINC00116Q8NCU8 138 aa25.83■■□□□ 1.73
TSSC4-203ENST00000380996 PLBD2Q8NHP8 589 aa25.83■■□□□ 1.73
TSSC4-203ENST00000380996 ZNF330Q9Y3S2 320 aaPredicted RBP25.83■■□□□ 1.73
TSSC4-203ENST00000380996 CNTNAP4Q9C0A0 1308 aa25.83■■□□□ 1.72
TSSC4-203ENST00000380996 KCNQ4P56696 695 aa25.81■■□□□ 1.72
TSSC4-203ENST00000380996 KIF6Q6ZMV9 814 aa25.81■■□□□ 1.72
TSSC4-203ENST00000380996 SRCIN1Q9C0H9 1055 aa25.81■■□□□ 1.72
TSSC4-203ENST00000380996 NEXNQ0ZGT2 675 aa25.8■■□□□ 1.72
TSSC4-203ENST00000380996 LY75O60449 1722 aa25.8■■□□□ 1.72
TSSC4-203ENST00000380996 ATP10DQ9P241 1426 aa25.79■■□□□ 1.72
TSSC4-203ENST00000380996 ZBTB7BO15156 539 aaPredicted RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms