RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 SHROOM2Q13796 1616 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.6□□□□□ -0.07
GABPB1-203ENST00000380877 FIBPO43427 364 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 DCAF5Q96JK2 942 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 RNMTO43148 476 aaKnown RBP14.6□□□□□ -0.07
GABPB1-203ENST00000380877 RHPN1Q8TCX5 695 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 MTMR7Q9Y216 660 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 CHL1O00533 1208 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 SLC3A2P08195 630 aaKnown RBP14.6□□□□□ -0.07
GABPB1-203ENST00000380877 TTC22Q5TAA0 569 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 LRP2BPQ9P2M1 347 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 ARHGAP31Q2M1Z3 1444 aa14.6□□□□□ -0.07
GABPB1-203ENST00000380877 KDM4AO75164 1064 aa14.59□□□□□ -0.07
GABPB1-203ENST00000380877 XBP1P17861 261 aa14.59□□□□□ -0.07
GABPB1-203ENST00000380877 CAVIN1Q6NZI2 390 aaKnown RBP14.59□□□□□ -0.07
GABPB1-203ENST00000380877 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
GABPB1-203ENST00000380877 KIF1BO60333 1816 aa14.59□□□□□ -0.07
GABPB1-203ENST00000380877 WDR33Q9C0J8 1336 aaKnown RBP14.59□□□□□ -0.07
GABPB1-203ENST00000380877 GRM8O00222 908 aa14.59□□□□□ -0.07
GABPB1-203ENST00000380877 TPD52L1Q16890 204 aaPredicted RBP14.59□□□□□ -0.07
GABPB1-203ENST00000380877 NCBP3Q53F19 620 aaKnown RBP14.59□□□□□ -0.07
GABPB1-203ENST00000380877 CASTP20810 708 aaKnown RBP14.59□□□□□ -0.07
GABPB1-203ENST00000380877 PIP4K2AP48426 406 aaPredicted RBP14.59□□□□□ -0.07
GABPB1-203ENST00000380877 PRPF40BQ6NWY9 871 aaKnown RBP14.59□□□□□ -0.07
GABPB1-203ENST00000380877 LINS1Q8NG48 757 aa14.59□□□□□ -0.07
GABPB1-203ENST00000380877 RAI14Q9P0K7 980 aa14.59□□□□□ -0.07
GABPB1-203ENST00000380877 ABCF2Q9UG63 623 aa14.58□□□□□ -0.07
GABPB1-203ENST00000380877 ANKRD18BA2A2Z9 1011 aa14.58□□□□□ -0.08
GABPB1-203ENST00000380877 ATP8B2P98198 1209 aa14.58□□□□□ -0.08
GABPB1-203ENST00000380877 ZSCAN31Q96LW9 406 aaPredicted RBP14.58□□□□□ -0.08
GABPB1-203ENST00000380877 SASS6Q6UVJ0 657 aa14.58□□□□□ -0.08
GABPB1-203ENST00000380877 STK11IPQ8N1F8 1099 aa14.58□□□□□ -0.08
GABPB1-203ENST00000380877 LARP1BQ659C4 914 aaKnown RBP14.57□□□□□ -0.08
GABPB1-203ENST00000380877 SF3B2Q13435 895 aaKnown RBP14.57□□□□□ -0.08
GABPB1-203ENST00000380877 LDHAL6AQ6ZMR3 332 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 CDC42BPBQ9Y5S2 1711 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 SOS1Q07889 1333 aaPredicted RBP14.57□□□□□ -0.08
GABPB1-203ENST00000380877 TDO2P48775 406 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 NBPF6Q5VWK0 638 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 NBPF4Q96M43 638 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 BRMS1Q9HCU9 246 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 ROBO2Q9HCK4 1378 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 PES1O00541 588 aaKnown RBP14.57□□□□□ -0.08
GABPB1-203ENST00000380877 SMC5Q8IY18 1101 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 AIDAQ96BJ3 306 aa14.57□□□□□ -0.08
GABPB1-203ENST00000380877 HOOK1Q9UJC3 728 aaKnown RBP14.57□□□□□ -0.08
GABPB1-203ENST00000380877 DDB1Q16531 1140 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 EVI5LQ96CN4 794 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 SDF4Q9BRK5 362 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 TBC1D2Q9BYX2 928 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 CEP85Q6P2H3 762 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 G2E3Q7L622 706 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 DDX17Q92841 729 aaKnown RBP14.56□□□□□ -0.08
GABPB1-203ENST00000380877 PHAXQ9H814 394 aaKnown RBP14.56□□□□□ -0.08
GABPB1-203ENST00000380877 ATP2B1P20020 1258 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 PDE1AP54750 535 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 TBC1D32Q96NH3 1257 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 DCTPP1Q9H773 170 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 BABAM1Q9NWV8 329 aa14.56□□□□□ -0.08
GABPB1-203ENST00000380877 UNC13BO14795 1591 aa14.55□□□□□ -0.08
GABPB1-203ENST00000380877 HMGB2P26583 209 aaKnown RBP14.55□□□□□ -0.08
GABPB1-203ENST00000380877 SDSP20132 328 aa14.55□□□□□ -0.08
GABPB1-203ENST00000380877 SYNMO15061 1565 aa14.55□□□□□ -0.08
GABPB1-203ENST00000380877 MCM4P33991 863 aa14.55□□□□□ -0.08
GABPB1-203ENST00000380877 IMMTQ16891 758 aaKnown RBP14.55□□□□□ -0.08
GABPB1-203ENST00000380877 LGR6Q9HBX8 967 aa14.55□□□□□ -0.08
GABPB1-203ENST00000380877 U3KPZ7 1027 aaPredicted RBP14.55□□□□□ -0.08
GABPB1-203ENST00000380877 RNF123Q5XPI4 1314 aa14.55□□□□□ -0.08
GABPB1-203ENST00000380877 ZBTB7BO15156 539 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-203ENST00000380877 MRE11P49959 708 aa14.54□□□□□ -0.08
GABPB1-203ENST00000380877 CWF19L2Q2TBE0 894 aaKnown RBP14.54□□□□□ -0.08
GABPB1-203ENST00000380877 ACSBG1Q96GR2 724 aa14.54□□□□□ -0.08
GABPB1-203ENST00000380877 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-203ENST00000380877 RNF214Q8ND24 703 aa14.54□□□□□ -0.08
GABPB1-203ENST00000380877 CTDP1Q9Y5B0 961 aaPredicted RBP14.54□□□□□ -0.08
GABPB1-203ENST00000380877 NLRP1Q9C000 1473 aa14.54□□□□□ -0.08
GABPB1-203ENST00000380877 DDX21Q9NR30 783 aaKnown RBP eCLIP14.54□□□□□ -0.08
GABPB1-203ENST00000380877 BTG4Q9NY30 223 aa14.54□□□□□ -0.08
GABPB1-203ENST00000380877 LMBR1LQ6UX01 489 aa14.54□□□□□ -0.08
GABPB1-203ENST00000380877 SLAIN2Q9P270 581 aa14.54□□□□□ -0.08
GABPB1-203ENST00000380877 CEBPZQ03701 1054 aaKnown RBP14.53□□□□□ -0.08
GABPB1-203ENST00000380877 C16orf71Q8IYS4 520 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-203ENST00000380877 CLTCL1P53675 1640 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 PCDH11XQ9BZA7 1347 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 PCDH11YQ9BZA8 1340 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 CAVIN4Q5BKX8 364 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 ARHGEF10O15013 1369 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 ABCA9Q8IUA7 1624 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 SLC5A1P13866 664 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 ZNF790Q6PG37 636 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 SAMD1Q6SPF0 538 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-203ENST00000380877 KRT85P78386 507 aa14.53□□□□□ -0.08
GABPB1-203ENST00000380877 ZNF396Q96N95 335 aaPredicted RBP14.53□□□□□ -0.08
GABPB1-203ENST00000380877 PRR36Q9H6K5 1346 aa14.52□□□□□ -0.08
GABPB1-203ENST00000380877 CCDC69A6NI79 296 aa14.52□□□□□ -0.08
GABPB1-203ENST00000380877 GOLIM4O00461 696 aa14.52□□□□□ -0.08
GABPB1-203ENST00000380877 STK38Q15208 465 aa14.52□□□□□ -0.08
GABPB1-203ENST00000380877 C8orf37Q96NL8 207 aa14.52□□□□□ -0.08
GABPB1-203ENST00000380877 SNRKQ9NRH2 765 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms