RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TUBGCP6Q96RT7 1819 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 C1orf141Q5JVX7 400 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 TMEM94Q12767 1356 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 NCOA3Q9Y6Q9 1424 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 PI4KAP2A4QPH2 592 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 PI4KAP1Q8N8J0 262 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 CABLES1Q8TDN4 633 aa9.84□□□□□ -0.83
PDLIM5-204ENST00000380176 MST1RQ04912 1400 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 SIPA1L3O60292 1781 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 ERBB3P21860 1342 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 SALL3Q9BXA9 1300 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 NBPF7P0C2Y1 421 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 UBTFL1P0CB47 393 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 USP26Q9BXU7 913 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 IBTKQ9P2D0 1353 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 ATF3P18847 181 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 DDIT3P35638 169 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 PDE4CQ08493 712 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 NKX1-1Q15270 411 aaPredicted RBP9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 PROSER3Q2NL68 480 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 LRRCC1Q9C099 1032 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 OSBPL3Q9H4L5 887 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 CHMP5Q9NZZ3 219 aa9.83□□□□□ -0.84
PDLIM5-204ENST00000380176 HOXB7P09629 217 aa9.82□□□□□ -0.84
PDLIM5-204ENST00000380176 SRCIN1Q9C0H9 1055 aa9.82□□□□□ -0.84
PDLIM5-204ENST00000380176 BEND3Q5T5X7 828 aa9.82□□□□□ -0.84
PDLIM5-204ENST00000380176 ADCY9O60503 1353 aa9.82□□□□□ -0.84
PDLIM5-204ENST00000380176 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 CAPN15O75808 1086 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 HSP90AB1P08238 724 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 HSPA2P54652 639 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 DNAAF4Q8WXU2 420 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 CRYBG1Q9Y4K1 1723 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 COL18A1P39060 1754 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 PPP1R42Q7Z4L9 355 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 SPOCK2Q92563 424 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 HEG1Q9ULI3 1381 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 SSH3Q8TE77 659 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 IL1RAPL2Q9NP60 686 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 NLRP2Q9NX02 1062 aa9.81□□□□□ -0.84
PDLIM5-204ENST00000380176 AK9Q5TCS8 1911 aa9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 ADAMTS7Q9UKP4 1686 aa9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 K7ELQ4 463 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 IGSF3O75054 1194 aa9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 MX1P20591 662 aa9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 CHRNA2Q15822 529 aa9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 MCM4P33991 863 aa9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 SLC39A6Q13433 755 aa9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 DBF4Q9UBU7 674 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 SCN11AQ9UI33 1791 aa9.8□□□□□ -0.84
PDLIM5-204ENST00000380176 OVOS2A0A0G2JMS6 1433 aa9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 MEGF6O75095 1541 aa9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 UNC5CLQ8IV45 518 aa9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 MAP3K2Q9Y2U5 619 aa9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 SRGAP3O43295 1099 aa9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 SURF6O75683 361 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 CASC1Q6TDU7 716 aa9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 XIRP1Q702N8 1843 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-204ENST00000380176 KDM6AO15550 1401 aaPredicted RBP9.78□□□□□ -0.84
PDLIM5-204ENST00000380176 CWF19L2Q2TBE0 894 aaKnown RBP9.78□□□□□ -0.84
PDLIM5-204ENST00000380176 RAPGEF4Q8WZA2 1011 aa9.78□□□□□ -0.84
PDLIM5-204ENST00000380176 C5P01031 1676 aa9.78□□□□□ -0.84
PDLIM5-204ENST00000380176 ERC2O15083 957 aa9.78□□□□□ -0.84
PDLIM5-204ENST00000380176 RILPL2Q969X0 211 aa9.78□□□□□ -0.84
PDLIM5-204ENST00000380176 STAP2Q9UGK3 403 aa9.78□□□□□ -0.84
PDLIM5-204ENST00000380176 PDIA6Q15084 440 aa9.77□□□□□ -0.84
PDLIM5-204ENST00000380176 RABEP1Q15276 862 aa9.77□□□□□ -0.84
PDLIM5-204ENST00000380176 NFATC2IPQ8NCF5 419 aa9.77□□□□□ -0.84
PDLIM5-204ENST00000380176 DCCP43146 1447 aa9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 NPHP3Q7Z494 1330 aa9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 TRIM6-TRIM34B2RNG4 842 aa9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 HSP90AA1P07900 732 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 PHKG2P15735 406 aa9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 ZNF790Q6PG37 636 aa9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 KSR2Q6VAB6 950 aa9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 RHPN1Q8TCX5 695 aa9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 TNPO1Q92973 898 aaKnown RBP9.77□□□□□ -0.85
PDLIM5-204ENST00000380176 REC8O95072 547 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 CSB-PGBD3P0DP91 1061 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 AIMP1Q12904 312 aaKnown RBP9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 CADPS2Q86UW7 1296 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 SLC52A2Q9HAB3 445 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 TNS3Q68CZ2 1445 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 MAP4K4O95819 1239 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 TATP17735 454 aaPredicted RBP9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 CHMLP26374 656 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 ESYT1Q9BSJ8 1104 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 CHMP4AQ9BY43 222 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 IL25Q9H293 177 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 SPATA31A3Q5VYP0 1347 aa9.76□□□□□ -0.85
PDLIM5-204ENST00000380176 CYP27B1O15528 508 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 RAB11FIP3O75154 756 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 RAB3GAP1Q15042 981 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 IL27Q8NEV9 243 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 BRPF3Q9ULD4 1205 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 LMTK3Q96Q04 1460 aa9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 PIP4K2AP48426 406 aaPredicted RBP9.75□□□□□ -0.85
PDLIM5-204ENST00000380176 PI4K2BQ8TCG2 481 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms