RNA–Protein interactions for RNA: ENST00000379960.9

ITSN1-201, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-201ENST00000379960 KNDC1Q76NI1 1749 aa12.96□□□□□ -0.33
ITSN1-201ENST00000379960 MED14O60244 1454 aa12.96□□□□□ -0.33
ITSN1-201ENST00000379960 NEUROD2Q15784 382 aa12.96□□□□□ -0.34
ITSN1-201ENST00000379960 BRMS1Q9HCU9 246 aa12.96□□□□□ -0.34
ITSN1-201ENST00000379960 ZDHHC9Q9Y397 364 aa12.96□□□□□ -0.34
ITSN1-201ENST00000379960 TECPR2O15040 1411 aa12.95□□□□□ -0.34
ITSN1-201ENST00000379960 FAM135BQ49AJ0 1406 aa12.95□□□□□ -0.34
ITSN1-201ENST00000379960 FBXO38Q6PIJ6 1188 aa12.95□□□□□ -0.34
ITSN1-201ENST00000379960 C14orf37Q86TY3 774 aa12.95□□□□□ -0.34
ITSN1-201ENST00000379960 RGPD8O14715 1765 aaPredicted RBP12.95□□□□□ -0.34
ITSN1-201ENST00000379960 FAM43BQ6ZT52 329 aaPredicted RBP12.95□□□□□ -0.34
ITSN1-201ENST00000379960 JRKLQ9Y4A0 524 aa12.95□□□□□ -0.34
ITSN1-201ENST00000379960 HCLS1P14317 486 aaPredicted RBP12.94□□□□□ -0.34
ITSN1-201ENST00000379960 UVSSAQ2YD98 709 aa12.94□□□□□ -0.34
ITSN1-201ENST00000379960 DNAJC21Q5F1R6 531 aaKnown RBP12.94□□□□□ -0.34
ITSN1-201ENST00000379960 RARSP54136 660 aaKnown RBP12.94□□□□□ -0.34
ITSN1-201ENST00000379960 FAM184AQ8NB25 1140 aa12.94□□□□□ -0.34
ITSN1-201ENST00000379960 SYAP1Q96A49 352 aaPredicted RBP12.94□□□□□ -0.34
ITSN1-201ENST00000379960 KIF1BPQ96EK5 621 aa12.94□□□□□ -0.34
ITSN1-201ENST00000379960 LNPKQ9C0E8 428 aa12.94□□□□□ -0.34
ITSN1-201ENST00000379960 TPRNQ4KMQ1 711 aa12.93□□□□□ -0.34
ITSN1-201ENST00000379960 CCDC191Q8NCU4 936 aa12.93□□□□□ -0.34
ITSN1-201ENST00000379960 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
ITSN1-201ENST00000379960 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
ITSN1-201ENST00000379960 U2SURPO15042 1029 aaKnown RBP12.93□□□□□ -0.34
ITSN1-201ENST00000379960 ACEP12821 1306 aa12.93□□□□□ -0.34
ITSN1-201ENST00000379960 ATP7BP35670 1465 aa12.92□□□□□ -0.34
ITSN1-201ENST00000379960 PHF14O94880 888 aa12.92□□□□□ -0.34
ITSN1-201ENST00000379960 SATB1Q01826 763 aa12.92□□□□□ -0.34
ITSN1-201ENST00000379960 MUM1L1Q5H9M0 696 aa12.92□□□□□ -0.34
ITSN1-201ENST00000379960 IFT57Q9NWB7 429 aa12.92□□□□□ -0.34
ITSN1-201ENST00000379960 NPHP1O15259 732 aa12.91□□□□□ -0.34
ITSN1-201ENST00000379960 MVPQ14764 893 aaKnown RBP12.91□□□□□ -0.34
ITSN1-201ENST00000379960 ELF2Q15723 593 aa12.91□□□□□ -0.34
ITSN1-201ENST00000379960 E2F4Q16254 413 aa12.91□□□□□ -0.34
ITSN1-201ENST00000379960 FOXD4L6Q3SYB3 417 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-201ENST00000379960 FOXD4L3Q6VB84 417 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-201ENST00000379960 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-201ENST00000379960 POLR3GO15318 223 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-201ENST00000379960 KDM4AO75164 1064 aa12.91□□□□□ -0.34
ITSN1-201ENST00000379960 NUTM2GQ5VZR2 741 aa12.91□□□□□ -0.34
ITSN1-201ENST00000379960 LRRFIP2Q9Y608 721 aaKnown RBP12.91□□□□□ -0.34
ITSN1-201ENST00000379960 TSGA10IPQ3SY00 556 aa12.91□□□□□ -0.34
ITSN1-201ENST00000379960 TXLNBQ8N3L3 684 aa12.91□□□□□ -0.34
ITSN1-201ENST00000379960 ZNF215Q9UL58 517 aaPredicted RBP12.91□□□□□ -0.34
ITSN1-201ENST00000379960 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
ITSN1-201ENST00000379960 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.34
ITSN1-201ENST00000379960 RRS1Q15050 365 aaKnown RBP12.9□□□□□ -0.34
ITSN1-201ENST00000379960 TBC1D9Q6ZT07 1266 aa12.9□□□□□ -0.34
ITSN1-201ENST00000379960 GOLGA6L1Q8N7Z2 621 aa12.9□□□□□ -0.34
ITSN1-201ENST00000379960 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
ITSN1-201ENST00000379960 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
ITSN1-201ENST00000379960 IRF6O14896 467 aa12.9□□□□□ -0.34
ITSN1-201ENST00000379960 CXorf56Q9H5V9 222 aa12.9□□□□□ -0.34
ITSN1-201ENST00000379960 CWC22Q9HCG8 908 aaKnown RBP12.9□□□□□ -0.34
ITSN1-201ENST00000379960 KIF20BQ96Q89 1820 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
ITSN1-201ENST00000379960 GOLIM4O00461 696 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 PTGS1P23219 599 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 ZSCAN26Q16670 478 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 GDPD2Q9HCC8 539 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 ATG3Q9NT62 314 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 DONSONQ9NYP3 566 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 EMILIN1Q9Y6C2 1016 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 USP32Q8NFA0 1604 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 AP5Z1O43299 807 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 PAXBP1Q9Y5B6 917 aa12.89□□□□□ -0.35
ITSN1-201ENST00000379960 KDM4FA0A1W2PPD8 638 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 TDO2P48775 406 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 BMS1Q14692 1282 aaKnown RBP12.88□□□□□ -0.35
ITSN1-201ENST00000379960 TEX35Q5T0J7 233 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 SUFUQ9UMX1 484 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 GADD45BO75293 160 aaPredicted RBP12.88□□□□□ -0.35
ITSN1-201ENST00000379960 RNF217Q8TC41 542 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
ITSN1-201ENST00000379960 A0A1B0GUL7 405 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 TPM3P06753 285 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 ST5P78524 1137 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 LRMPQ12912 555 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 RABEP1Q15276 862 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 TTC31Q49AM3 519 aaPredicted RBP12.88□□□□□ -0.35
ITSN1-201ENST00000379960 HSP90AB3PQ58FF7 597 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 SRLQ86TD4 932 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 PACS2Q86VP3 889 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 DEF6Q9H4E7 631 aa12.88□□□□□ -0.35
ITSN1-201ENST00000379960 RRP15Q9Y3B9 282 aaKnown RBP12.88□□□□□ -0.35
ITSN1-201ENST00000379960 XRN1Q8IZH2 1706 aaKnown RBP12.87□□□□□ -0.35
ITSN1-201ENST00000379960 ATP2B1P20020 1258 aa12.87□□□□□ -0.35
ITSN1-201ENST00000379960 CPSF1Q10570 1443 aaKnown RBP12.87□□□□□ -0.35
ITSN1-201ENST00000379960 DIP2AQ14689 1571 aa12.87□□□□□ -0.35
ITSN1-201ENST00000379960 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
ITSN1-201ENST00000379960 NSD2O96028 1365 aa12.87□□□□□ -0.35
ITSN1-201ENST00000379960 HDAC1Q13547 482 aaPredicted RBP12.87□□□□□ -0.35
ITSN1-201ENST00000379960 SMARCE1Q969G3 411 aa12.87□□□□□ -0.35
ITSN1-201ENST00000379960 COG3Q96JB2 828 aa12.87□□□□□ -0.35
ITSN1-201ENST00000379960 CHD2O14647 1828 aaKnown RBP12.87□□□□□ -0.35
ITSN1-201ENST00000379960 SMARCA5O60264 1052 aaPredicted RBP12.86□□□□□ -0.35
ITSN1-201ENST00000379960 BMP2KLQ5H9B9 411 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms