RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 DNAAF4Q8WXU2 420 aa21.77■■□□□ 1.08
THUMPD2-201ENST00000378727 USP16Q9Y5T5 823 aa21.77■■□□□ 1.08
THUMPD2-201ENST00000378727 LAMB4A4D0S4 1761 aa21.76■■□□□ 1.07
THUMPD2-201ENST00000378727 USP44Q9H0E7 712 aa21.76■■□□□ 1.07
THUMPD2-201ENST00000378727 KCPQ6ZWJ8 1503 aa21.76■■□□□ 1.07
THUMPD2-201ENST00000378727 NWD2Q9ULI1 1742 aa21.75■■□□□ 1.07
THUMPD2-201ENST00000378727 BEND3Q5T5X7 828 aa21.75■■□□□ 1.07
THUMPD2-201ENST00000378727 CHD1LQ86WJ1 897 aa21.75■■□□□ 1.07
THUMPD2-201ENST00000378727 SLIT2O94813 1529 aa21.75■■□□□ 1.07
THUMPD2-201ENST00000378727 GNAI3P08754 354 aa21.75■■□□□ 1.07
THUMPD2-201ENST00000378727 SRCIN1Q9C0H9 1055 aa21.75■■□□□ 1.07
THUMPD2-201ENST00000378727 DCTPP1Q9H773 170 aa21.75■■□□□ 1.07
THUMPD2-201ENST00000378727 SPATA31A1Q5TZJ5 1347 aa21.74■■□□□ 1.07
THUMPD2-201ENST00000378727 GNAI2P04899 355 aa21.74■■□□□ 1.07
THUMPD2-201ENST00000378727 LNPKQ9C0E8 428 aa21.74■■□□□ 1.07
THUMPD2-201ENST00000378727 KSR2Q6VAB6 950 aa21.73■■□□□ 1.07
THUMPD2-201ENST00000378727 TNS2Q63HR2 1409 aa21.73■■□□□ 1.07
THUMPD2-201ENST00000378727 ANKRD45Q5TZF3 282 aa21.73■■□□□ 1.07
THUMPD2-201ENST00000378727 LRP10Q7Z4F1 713 aa21.73■■□□□ 1.07
THUMPD2-201ENST00000378727 MAP3K2Q9Y2U5 619 aa21.73■■□□□ 1.07
THUMPD2-201ENST00000378727 ITGB4P16144 1822 aa21.73■■□□□ 1.07
THUMPD2-201ENST00000378727 MYL6BP14649 208 aa21.71■■□□□ 1.07
THUMPD2-201ENST00000378727 EXOC5O00471 708 aa21.7■■□□□ 1.06
THUMPD2-201ENST00000378727 AEBP2Q6ZN18 517 aaPredicted RBP21.7■■□□□ 1.06
THUMPD2-201ENST00000378727 TMOD3Q9NYL9 352 aa21.7■■□□□ 1.06
THUMPD2-201ENST00000378727 JCADQ9P266 1359 aa21.7■■□□□ 1.06
THUMPD2-201ENST00000378727 AIMP1Q12904 312 aaKnown RBP21.7■■□□□ 1.06
THUMPD2-201ENST00000378727 THRAP3Q9Y2W1 955 aaKnown RBP21.7■■□□□ 1.06
THUMPD2-201ENST00000378727 LRRFIP2Q9Y608 721 aaKnown RBP21.7■■□□□ 1.06
THUMPD2-201ENST00000378727 LRP6O75581 1613 aa21.7■■□□□ 1.06
THUMPD2-201ENST00000378727 SPATA31A5Q5VU36 1347 aa21.69■■□□□ 1.06
THUMPD2-201ENST00000378727 SPATA31A7Q8IWB4 1347 aa21.69■■□□□ 1.06
THUMPD2-201ENST00000378727 UBTFL1P0CB47 393 aaPredicted RBP21.69■■□□□ 1.06
THUMPD2-201ENST00000378727 PIP4K2AP48426 406 aaPredicted RBP21.69■■□□□ 1.06
THUMPD2-201ENST00000378727 CERKQ8TCT0 537 aa21.69■■□□□ 1.06
THUMPD2-201ENST00000378727 XAGE3Q8WTP9 111 aa21.68■■□□□ 1.06
THUMPD2-201ENST00000378727 PIGBQ92521 554 aa21.68■■□□□ 1.06
THUMPD2-201ENST00000378727 CDCA7Q9BWT1 371 aaPredicted RBP21.68■■□□□ 1.06
THUMPD2-201ENST00000378727 DDX58O95786 925 aaKnown RBP21.68■■□□□ 1.06
THUMPD2-201ENST00000378727 PTCD1O75127 700 aaKnown RBP21.67■■□□□ 1.06
THUMPD2-201ENST00000378727 HMMRO75330 724 aa21.67■■□□□ 1.06
THUMPD2-201ENST00000378727 NBPF7P0C2Y1 421 aaPredicted RBP21.67■■□□□ 1.06
THUMPD2-201ENST00000378727 COPS6Q7L5N1 327 aa21.67■■□□□ 1.06
THUMPD2-201ENST00000378727 ATP8B2P98198 1209 aa21.67■■□□□ 1.06
THUMPD2-201ENST00000378727 PNMA6EA0A0J9YXQ4 647 aa21.66■■□□□ 1.06
THUMPD2-201ENST00000378727 ALDH1L1O75891 902 aa21.66■■□□□ 1.06
THUMPD2-201ENST00000378727 ASAP1Q9ULH1 1129 aa21.65■■□□□ 1.06
THUMPD2-201ENST00000378727 NBPF26B4DH59 902 aa21.65■■□□□ 1.06
THUMPD2-201ENST00000378727 CWF19L2Q2TBE0 894 aaKnown RBP21.65■■□□□ 1.06
THUMPD2-201ENST00000378727 NBPF14Q5TI25 921 aa21.65■■□□□ 1.06
THUMPD2-201ENST00000378727 NBPF10Q6P3W6 841 aaKnown RBP21.65■■□□□ 1.06
THUMPD2-201ENST00000378727 NBPF15Q8N660 670 aa21.65■■□□□ 1.06
THUMPD2-201ENST00000378727 BCL9O00512 1426 aa21.64■■□□□ 1.06
THUMPD2-201ENST00000378727 LINS1Q8NG48 757 aa21.64■■□□□ 1.05
THUMPD2-201ENST00000378727 ERBB4Q15303 1308 aa21.64■■□□□ 1.05
THUMPD2-201ENST00000378727 RIC3Q7Z5B4 369 aa21.64■■□□□ 1.05
THUMPD2-201ENST00000378727 ATG3Q9NT62 314 aa21.64■■□□□ 1.05
THUMPD2-201ENST00000378727 BCL9LQ86UU0 1499 aa21.63■■□□□ 1.05
THUMPD2-201ENST00000378727 DOT1LQ8TEK3 1739 aa21.63■■□□□ 1.05
THUMPD2-201ENST00000378727 DDB1Q16531 1140 aa21.63■■□□□ 1.05
THUMPD2-201ENST00000378727 BARGINQ6ZT62 677 aa21.63■■□□□ 1.05
THUMPD2-201ENST00000378727 UNC5CLQ8IV45 518 aa21.63■■□□□ 1.05
THUMPD2-201ENST00000378727 KAT6BQ8WYB5 2073 aa21.63■■□□□ 1.05
THUMPD2-201ENST00000378727 C8orf37Q96NL8 207 aa21.62■■□□□ 1.05
THUMPD2-201ENST00000378727 CCDC9Q9Y3X0 531 aaKnown RBP21.62■■□□□ 1.05
THUMPD2-201ENST00000378727 ARFGEF2Q9Y6D5 1785 aa21.62■■□□□ 1.05
THUMPD2-201ENST00000378727 IGKV5-2P06315 115 aa21.62■■□□□ 1.05
THUMPD2-201ENST00000378727 ANKRD13DQ6ZTN6 518 aa21.62■■□□□ 1.05
THUMPD2-201ENST00000378727 NPM2Q86SE8 214 aaKnown RBP21.62■■□□□ 1.05
THUMPD2-201ENST00000378727 A1BGP04217 495 aa21.61■■□□□ 1.05
THUMPD2-201ENST00000378727 NGLY1Q96IV0 654 aa21.6■■□□□ 1.05
THUMPD2-201ENST00000378727 METTL22Q9BUU2 404 aaPredicted RBP21.6■■□□□ 1.05
THUMPD2-201ENST00000378727 SMARCA5O60264 1052 aaPredicted RBP21.6■■□□□ 1.05
THUMPD2-201ENST00000378727 SEC24BO95487 1268 aa21.6■■□□□ 1.05
THUMPD2-201ENST00000378727 ANP32AP39687 249 aaKnown RBP21.6■■□□□ 1.05
THUMPD2-201ENST00000378727 SSH3Q8TE77 659 aa21.6■■□□□ 1.05
THUMPD2-201ENST00000378727 APBB1O00213 710 aa21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 C16orf71Q8IYS4 520 aaPredicted RBP21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 C9orf78Q9NZ63 289 aaPredicted RBP21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 EXOC6BQ9Y2D4 811 aa21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 IBTKQ9P2D0 1353 aaPredicted RBP21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 UTYO14607 1347 aa21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 SPATA31A6Q5VVP1 1343 aa21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 POLA2Q14181 598 aa21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 PPP1R42Q7Z4L9 355 aa21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 VSIG10Q8N0Z9 540 aa21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 MARCH10Q8NA82 808 aaPredicted RBP21.59■■□□□ 1.05
THUMPD2-201ENST00000378727 NEURL1BA8MQ27 555 aa21.58■■□□□ 1.05
THUMPD2-201ENST00000378727 PRIM1P49642 420 aaKnown RBP21.58■■□□□ 1.05
THUMPD2-201ENST00000378727 PLEKHM2Q8IWE5 1019 aa21.58■■□□□ 1.05
THUMPD2-201ENST00000378727 FNBP4Q8N3X1 1017 aaPredicted RBP21.58■■□□□ 1.05
THUMPD2-201ENST00000378727 MYD88Q99836 296 aa21.58■■□□□ 1.05
THUMPD2-201ENST00000378727 GRM8O00222 908 aa21.57■■□□□ 1.04
THUMPD2-201ENST00000378727 VPS72Q15906 364 aa21.57■■□□□ 1.04
THUMPD2-201ENST00000378727 NUP188Q5SRE5 1749 aa21.57■■□□□ 1.04
THUMPD2-201ENST00000378727 NEXNQ0ZGT2 675 aa21.57■■□□□ 1.04
THUMPD2-201ENST00000378727 PLBD2Q8NHP8 589 aa21.57■■□□□ 1.04
THUMPD2-201ENST00000378727 OTUD7AQ8TE49 926 aaPredicted RBP21.57■■□□□ 1.04
THUMPD2-201ENST00000378727 SYTL4Q96C24 671 aaPredicted RBP21.57■■□□□ 1.04
THUMPD2-201ENST00000378727 BMP2KLQ5H9B9 411 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms