RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 ARXQ96QS3 562 aa15.23■□□□□ 0.03
DEPDC4-202ENST00000378244 INTS5Q6P9B9 1019 aaKnown RBP15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 CCDC87Q9NVE4 849 aa15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 BABAM1Q9NWV8 329 aa15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 RTCBQ9Y3I0 505 aaKnown RBP15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 C5P01031 1676 aa15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 PNPLA7Q6ZV29 1317 aa15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 NGEFQ8N5V2 710 aa15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 TEX13AQ9BXU3 409 aaPredicted RBP15.22■□□□□ 0.03
DEPDC4-202ENST00000378244 NCBP3Q53F19 620 aaKnown RBP15.21■□□□□ 0.03
DEPDC4-202ENST00000378244 ZNF521Q96K83 1311 aa15.21■□□□□ 0.03
DEPDC4-202ENST00000378244 C4BP0C0L5 1744 aa15.21■□□□□ 0.03
DEPDC4-202ENST00000378244 ZBTB7AO95365 584 aa15.21■□□□□ 0.02
DEPDC4-202ENST00000378244 GOLGA2Q08379 1002 aa15.21■□□□□ 0.02
DEPDC4-202ENST00000378244 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.02
DEPDC4-202ENST00000378244 C8orf58Q8NAV2 365 aa15.21■□□□□ 0.02
DEPDC4-202ENST00000378244 UBR2Q8IWV8 1755 aa15.21■□□□□ 0.02
DEPDC4-202ENST00000378244 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
DEPDC4-202ENST00000378244 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
DEPDC4-202ENST00000378244 DUSP27Q5VZP5 1158 aa15.2■□□□□ 0.02
DEPDC4-202ENST00000378244 YTHDC1Q96MU7 727 aaKnown RBP15.2■□□□□ 0.02
DEPDC4-202ENST00000378244 RPS6KA4O75676 772 aa15.2■□□□□ 0.02
DEPDC4-202ENST00000378244 RC3H1Q5TC82 1133 aaKnown RBP15.2■□□□□ 0.02
DEPDC4-202ENST00000378244 TSPYL6Q8N831 410 aa15.2■□□□□ 0.02
DEPDC4-202ENST00000378244 TAF1LQ8IZX4 1826 aa15.19■□□□□ 0.02
DEPDC4-202ENST00000378244 KDM3BQ7LBC6 1761 aa15.19■□□□□ 0.02
DEPDC4-202ENST00000378244 IL16Q14005 1332 aa15.19■□□□□ 0.02
DEPDC4-202ENST00000378244 TJP1Q07157 1748 aa15.19■□□□□ 0.02
DEPDC4-202ENST00000378244 MYL6BP14649 208 aa15.19■□□□□ 0.02
DEPDC4-202ENST00000378244 TRAPPC3LQ5T215 181 aa15.19■□□□□ 0.02
DEPDC4-202ENST00000378244 ANXA1P04083 346 aa15.18■□□□□ 0.02
DEPDC4-202ENST00000378244 HMGB2P26583 209 aaKnown RBP15.18■□□□□ 0.02
DEPDC4-202ENST00000378244 ARHGEF1Q92888 912 aaKnown RBP15.18■□□□□ 0.02
DEPDC4-202ENST00000378244 TCERG1O14776 1098 aaKnown RBP15.18■□□□□ 0.02
DEPDC4-202ENST00000378244 NPM2Q86SE8 214 aaKnown RBP15.18■□□□□ 0.02
DEPDC4-202ENST00000378244 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
DEPDC4-202ENST00000378244 MYH14Q7Z406 1995 aaKnown RBP15.18■□□□□ 0.02
DEPDC4-202ENST00000378244 NBPF26B4DH59 902 aa15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 RFC4P35249 363 aa15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 EXOSC9Q06265 439 aaKnown RBP15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 MSL1Q68DK7 614 aa15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 NBPF10Q6P3W6 841 aaKnown RBP15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 NBPF15Q8N660 670 aa15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 SSFA2P28290 1259 aa15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 HDGFL1Q5TGJ6 251 aa15.17■□□□□ 0.02
DEPDC4-202ENST00000378244 SRP68Q9UHB9 627 aaKnown RBP15.16■□□□□ 0.02
DEPDC4-202ENST00000378244 TBC1D2BQ9UPU7 963 aa15.16■□□□□ 0.02
DEPDC4-202ENST00000378244 GOLGB1Q14789 3259 aaKnown RBP15.16■□□□□ 0.02
DEPDC4-202ENST00000378244 COL5A3P25940 1745 aaPredicted RBP15.16■□□□□ 0.02
DEPDC4-202ENST00000378244 PROSER3Q2NL68 480 aa15.15■□□□□ 0.02
DEPDC4-202ENST00000378244 TWISTNBQ3B726 338 aaPredicted RBP15.15■□□□□ 0.02
DEPDC4-202ENST00000378244 FLAD1Q8NFF5 587 aa15.15■□□□□ 0.02
DEPDC4-202ENST00000378244 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
DEPDC4-202ENST00000378244 E9PSI1 815 aa15.15■□□□□ 0.02
DEPDC4-202ENST00000378244 EIF5P55010 431 aaKnown RBP15.15■□□□□ 0.02
DEPDC4-202ENST00000378244 SLFN5Q08AF3 891 aa15.15■□□□□ 0.02
DEPDC4-202ENST00000378244 CHPF2Q9P2E5 772 aa15.15■□□□□ 0.02
DEPDC4-202ENST00000378244 ZNF831Q5JPB2 1677 aa15.14■□□□□ 0.01
DEPDC4-202ENST00000378244 IL6STP40189 918 aaPredicted RBP15.14■□□□□ 0.01
DEPDC4-202ENST00000378244 COL15A1P39059 1388 aa15.14■□□□□ 0.01
DEPDC4-202ENST00000378244 AIMP1Q12904 312 aaKnown RBP15.13■□□□□ 0.01
DEPDC4-202ENST00000378244 ZPR1O75312 459 aa15.12■□□□□ 0.01
DEPDC4-202ENST00000378244 ADRA2BP18089 450 aa15.12■□□□□ 0.01
DEPDC4-202ENST00000378244 PDIA6Q15084 440 aa15.12■□□□□ 0.01
DEPDC4-202ENST00000378244 USPL1Q5W0Q7 1092 aa15.12■□□□□ 0.01
DEPDC4-202ENST00000378244 UBR3Q6ZT12 1888 aa15.12■□□□□ 0.01
DEPDC4-202ENST00000378244 DZIP3Q86Y13 1208 aaKnown RBP15.12■□□□□ 0.01
DEPDC4-202ENST00000378244 TUBGCP6Q96RT7 1819 aa15.12■□□□□ 0.01
DEPDC4-202ENST00000378244 HOXB7P09629 217 aa15.11■□□□□ 0.01
DEPDC4-202ENST00000378244 MTFR1LQ9H019 292 aa15.11■□□□□ 0.01
DEPDC4-202ENST00000378244 TTLL7Q6ZT98 887 aa15.11■□□□□ 0.01
DEPDC4-202ENST00000378244 VAMP4O75379 141 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 GYS1P13807 737 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 FKBP8Q14318 412 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 ZBED9Q6R2W3 1325 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 BICDL1Q6ZP65 573 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 CICQ96RK0 1608 aaPredicted RBP15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 USP42Q9H9J4 1324 aaKnown RBP15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 SPON1Q9HCB6 807 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 DBF4Q9UBU7 674 aaPredicted RBP15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 SLC16A10Q8TF71 515 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 ZBTB3Q9H5J0 574 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 DDX21Q9NR30 783 aaKnown RBP eCLIP15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 NARFQ9UHQ1 456 aa15.1■□□□□ 0.01
DEPDC4-202ENST00000378244 CCDC30Q5VVM6 783 aa15.09■□□□□ 0.01
DEPDC4-202ENST00000378244 COPS6Q7L5N1 327 aa15.09■□□□□ 0.01
DEPDC4-202ENST00000378244 PHAXQ9H814 394 aaKnown RBP15.09■□□□□ 0.01
DEPDC4-202ENST00000378244 XAGE3Q8WTP9 111 aa15.09■□□□□ 0.01
DEPDC4-202ENST00000378244 UTRNP46939 3433 aa15.08■□□□□ 0
DEPDC4-202ENST00000378244 A0A087WZG4 1122 aa15.08■□□□□ 0
DEPDC4-202ENST00000378244 SLC4A2P04920 1241 aa15.08■□□□□ 0
DEPDC4-202ENST00000378244 STK31Q9BXU1 1019 aa15.08■□□□□ 0
DEPDC4-202ENST00000378244 LRP10Q7Z4F1 713 aa15.08■□□□□ 0
DEPDC4-202ENST00000378244 TRMT2AQ8IZ69 625 aaKnown RBP15.08■□□□□ 0
DEPDC4-202ENST00000378244 ZNF428Q96B54 188 aa15.08■□□□□ 0
DEPDC4-202ENST00000378244 BCL2L12Q9HB09 334 aa15.08■□□□□ 0
DEPDC4-202ENST00000378244 ERBB4Q15303 1308 aa15.07■□□□□ 0
DEPDC4-202ENST00000378244 HLFQ16534 295 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms