RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 TNIP1Q15025 636 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 KIF18AQ8NI77 898 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 NAPBQ9H115 298 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 FGFR1OPO95684 399 aaKnown RBP17.3■□□□□ 0.36
EXT1-201ENST00000378204 CAVIN4Q5BKX8 364 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 EPRSP07814 1512 aaKnown RBP17.3■□□□□ 0.36
EXT1-201ENST00000378204 NUTM1Q86Y26 1132 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 SMAP1Q8IYB5 467 aaPredicted RBP17.3■□□□□ 0.36
EXT1-201ENST00000378204 NUDT16Q96DE0 195 aaKnown RBP17.3■□□□□ 0.36
EXT1-201ENST00000378204 POGZQ7Z3K3 1410 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 MCM3P25205 808 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 CCDC83Q8IWF9 413 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 RAB34Q9BZG1 259 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 DNAI2Q9GZS0 605 aa17.3■□□□□ 0.36
EXT1-201ENST00000378204 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
EXT1-201ENST00000378204 CTAGE5O15320 804 aa17.29■□□□□ 0.36
EXT1-201ENST00000378204 VPS36Q86VN1 386 aa17.29■□□□□ 0.36
EXT1-201ENST00000378204 C8orf76Q96K31 380 aa17.29■□□□□ 0.36
EXT1-201ENST00000378204 PHAXQ9H814 394 aaKnown RBP17.29■□□□□ 0.36
EXT1-201ENST00000378204 NUTM2BA6NNL0 878 aaPredicted RBP17.29■□□□□ 0.36
EXT1-201ENST00000378204 NUTM2EB1AL46 878 aaPredicted RBP17.29■□□□□ 0.36
EXT1-201ENST00000378204 NUTM2AQ8IVF1 878 aaPredicted RBP17.29■□□□□ 0.36
EXT1-201ENST00000378204 MKNK2Q9HBH9 465 aa17.29■□□□□ 0.36
EXT1-201ENST00000378204 FKBP15Q5T1M5 1219 aa17.29■□□□□ 0.36
EXT1-201ENST00000378204 IFIT1P09914 478 aaKnown RBP17.29■□□□□ 0.36
EXT1-201ENST00000378204 CAMK4Q16566 473 aa17.29■□□□□ 0.36
EXT1-201ENST00000378204 KIF5CO60282 957 aa17.29■□□□□ 0.36
EXT1-201ENST00000378204 MCM5P33992 734 aa17.28■□□□□ 0.36
EXT1-201ENST00000378204 KIF20AO95235 890 aa17.28■□□□□ 0.36
EXT1-201ENST00000378204 TAF7Q15545 349 aaPredicted RBP17.28■□□□□ 0.36
EXT1-201ENST00000378204 SUDS3Q9H7L9 328 aaPredicted RBP17.28■□□□□ 0.36
EXT1-201ENST00000378204 MINDY4BA8MYZ0 360 aa17.28■□□□□ 0.36
EXT1-201ENST00000378204 FAM114A1Q8IWE2 563 aa17.28■□□□□ 0.36
EXT1-201ENST00000378204 CCDC85AQ96PX6 553 aaPredicted RBP17.28■□□□□ 0.36
EXT1-201ENST00000378204 IQCA1Q86XH1 822 aa17.28■□□□□ 0.36
EXT1-201ENST00000378204 BOLA2Q9H3K6 86 aa17.28■□□□□ 0.36
EXT1-201ENST00000378204 DHX37Q8IY37 1157 aaKnown RBP17.28■□□□□ 0.36
EXT1-201ENST00000378204 NEBLO76041 1014 aa17.27■□□□□ 0.36
EXT1-201ENST00000378204 TSG101Q99816 390 aa17.27■□□□□ 0.36
EXT1-201ENST00000378204 TTC31Q49AM3 519 aaPredicted RBP17.27■□□□□ 0.36
EXT1-201ENST00000378204 AMOTQ4VCS5 1084 aa17.27■□□□□ 0.36
EXT1-201ENST00000378204 FERMT3Q86UX7 667 aa17.27■□□□□ 0.36
EXT1-201ENST00000378204 CACNA2D4Q7Z3S7 1137 aa17.27■□□□□ 0.35
EXT1-201ENST00000378204 CTCFLQ8NI51 663 aaPredicted RBP17.27■□□□□ 0.35
EXT1-201ENST00000378204 MAP3K12Q12852 859 aa17.26■□□□□ 0.35
EXT1-201ENST00000378204 KLHL10Q6JEL2 608 aa17.26■□□□□ 0.35
EXT1-201ENST00000378204 BCCIPQ9P287 314 aaKnown RBP eCLIP17.26■□□□□ 0.35
EXT1-201ENST00000378204 MRVI1Q9Y6F6 885 aa17.26■□□□□ 0.35
EXT1-201ENST00000378204 POLR3DP05423 398 aaPredicted RBP17.26■□□□□ 0.35
EXT1-201ENST00000378204 SSH1Q8WYL5 1049 aa17.26■□□□□ 0.35
EXT1-201ENST00000378204 MIS18AQ9NYP9 233 aa17.26■□□□□ 0.35
EXT1-201ENST00000378204 PTPN23Q9H3S7 1636 aa17.26■□□□□ 0.35
EXT1-201ENST00000378204 TOP1P11387 765 aaKnown RBP17.26■□□□□ 0.35
EXT1-201ENST00000378204 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
EXT1-201ENST00000378204 PRIMPOLQ96LW4 560 aa17.26■□□□□ 0.35
EXT1-201ENST00000378204 IFIT5Q13325 482 aaKnown RBP17.25■□□□□ 0.35
EXT1-201ENST00000378204 CASQ1P31415 396 aa17.25■□□□□ 0.35
EXT1-201ENST00000378204 MCM10Q7L590 875 aa17.25■□□□□ 0.35
EXT1-201ENST00000378204 KRT222Q8N1A0 295 aa17.25■□□□□ 0.35
EXT1-201ENST00000378204 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
EXT1-201ENST00000378204 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
EXT1-201ENST00000378204 IBSPP21815 317 aaPredicted RBP17.25■□□□□ 0.35
EXT1-201ENST00000378204 CFAP57Q96MR6 1250 aa17.25■□□□□ 0.35
EXT1-201ENST00000378204 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
EXT1-201ENST00000378204 MAP2K1Q02750 393 aaPredicted RBP17.25■□□□□ 0.35
EXT1-201ENST00000378204 ZNF213O14771 459 aa17.24■□□□□ 0.35
EXT1-201ENST00000378204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.24■□□□□ 0.35
EXT1-201ENST00000378204 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
EXT1-201ENST00000378204 BMS1Q14692 1282 aaKnown RBP17.24■□□□□ 0.35
EXT1-201ENST00000378204 MRC2Q9UBG0 1479 aa17.24■□□□□ 0.35
EXT1-201ENST00000378204 ZPR1O75312 459 aa17.24■□□□□ 0.35
EXT1-201ENST00000378204 LIMCH1Q9UPQ0 1083 aa17.24■□□□□ 0.35
EXT1-201ENST00000378204 RNF41Q9H4P4 317 aaPredicted RBP17.24■□□□□ 0.35
EXT1-201ENST00000378204 TMOD3Q9NYL9 352 aa17.24■□□□□ 0.35
EXT1-201ENST00000378204 DZIP1Q86YF9 867 aaKnown RBP17.23■□□□□ 0.35
EXT1-201ENST00000378204 BICDL1Q6ZP65 573 aa17.23■□□□□ 0.35
EXT1-201ENST00000378204 SLC12A7Q9Y666 1083 aa17.23■□□□□ 0.35
EXT1-201ENST00000378204 HYPKQ9NX55 129 aa17.23■□□□□ 0.35
EXT1-201ENST00000378204 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
EXT1-201ENST00000378204 CRACR2BQ8N4Y2 399 aaPredicted RBP17.23■□□□□ 0.35
EXT1-201ENST00000378204 DAAM2Q86T65 1068 aa17.23■□□□□ 0.35
EXT1-201ENST00000378204 RASSF4Q9H2L5 321 aa17.23■□□□□ 0.35
EXT1-201ENST00000378204 PTPRCP08575 1304 aa17.23■□□□□ 0.35
EXT1-201ENST00000378204 RNF187Q5TA31 235 aaPredicted RBP17.23■□□□□ 0.35
EXT1-201ENST00000378204 FAM135AQ9P2D6 1515 aa17.23■□□□□ 0.35
EXT1-201ENST00000378204 KIF4BQ2VIQ3 1234 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 CCDC184Q52MB2 194 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 PPP4R3AQ6IN85 833 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 KIF14Q15058 1648 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 RAPGEF3O95398 923 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 ANAPC15P60006 121 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 ZNF444Q8N0Y2 327 aaPredicted RBP17.22■□□□□ 0.35
EXT1-201ENST00000378204 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
EXT1-201ENST00000378204 CEP63Q96MT8 703 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 USO1O60763 962 aaKnown RBP17.22■□□□□ 0.35
EXT1-201ENST00000378204 CLCN1P35523 988 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 ANKIB1Q9P2G1 1089 aa17.22■□□□□ 0.35
EXT1-201ENST00000378204 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
EXT1-201ENST00000378204 PAFAH1B1P43034 410 aa17.21■□□□□ 0.35
EXT1-201ENST00000378204 A0A1B0GUA9 196 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms