RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 CCDC192P0DO97 292 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 FBXO38Q6PIJ6 1188 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 FAM200AQ8TCP9 573 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 ZNF592Q92610 1267 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 RILPL2Q969X0 211 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 EXOC6BQ9Y2D4 811 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 PAXBP1Q9Y5B6 917 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 ZNF397Q8NF99 534 aaPredicted RBP18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 CACTINQ8WUQ7 758 aaKnown RBP18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 TRERF1Q96PN7 1200 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 POLKQ9UBT6 870 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 ERBB3P21860 1342 aa18.71■□□□□ 0.59
CSNK1A1-202ENST00000377843 USP27XA6NNY8 438 aa18.7■□□□□ 0.58
CSNK1A1-202ENST00000377843 CAMK4Q16566 473 aa18.7■□□□□ 0.58
CSNK1A1-202ENST00000377843 TPD52L1Q16890 204 aaPredicted RBP18.7■□□□□ 0.58
CSNK1A1-202ENST00000377843 SLC52A1Q9NWF4 448 aa18.7■□□□□ 0.58
CSNK1A1-202ENST00000377843 CCDC144BQ3MJ40 725 aa18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 CCDC144CPQ8IYA2 1237 aa18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 ZNF446Q9NWS9 450 aa18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 CHMP3Q9Y3E7 222 aa18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 TRIM6-TRIM34B2RNG4 842 aa18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 RUFY3Q7L099 469 aa18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 ARHGEF28Q8N1W1 1705 aaKnown RBP18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 KIAA0232Q92628 1395 aa18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 DNAJC2Q99543 621 aaKnown RBP18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 CBX8Q9HC52 389 aa18.69■□□□□ 0.58
CSNK1A1-202ENST00000377843 LARGE1O95461 756 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 TYRO3Q06418 890 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 CEP135Q66GS9 1140 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 PLA2G4DQ86XP0 818 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 DRC7Q8IY82 874 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 PPLO60437 1756 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 HSPA4P34932 840 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 ZNF75DP51815 510 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 AK2P54819 239 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 ELF2Q15723 593 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 RTF1Q92541 710 aaKnown RBP18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 TTC14Q96N46 770 aa18.68■□□□□ 0.58
CSNK1A1-202ENST00000377843 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.67■□□□□ 0.58
CSNK1A1-202ENST00000377843 LIG1P18858 919 aa18.67■□□□□ 0.58
CSNK1A1-202ENST00000377843 MTMR6Q9Y217 621 aa18.67■□□□□ 0.58
CSNK1A1-202ENST00000377843 RIMS2Q9UQ26 1411 aa18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 ARID5BQ14865 1188 aa18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 CKAP2LQ8IYA6 745 aa18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 CALCOCO1Q9P1Z2 691 aa18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 SSH2Q76I76 1423 aa18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 ANKRD26Q9UPS8 1709 aa18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 CPA1P15085 419 aa18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
CSNK1A1-202ENST00000377843 ANO6Q4KMQ2 910 aa18.65■□□□□ 0.58
CSNK1A1-202ENST00000377843 TRIM5Q9C035 493 aa18.65■□□□□ 0.58
CSNK1A1-202ENST00000377843 TERF2IPQ9NYB0 399 aa18.65■□□□□ 0.58
CSNK1A1-202ENST00000377843 RASEFQ8IZ41 740 aa18.65■□□□□ 0.58
CSNK1A1-202ENST00000377843 TRIM34Q9BYJ4 488 aa18.65■□□□□ 0.58
CSNK1A1-202ENST00000377843 SMC3Q9UQE7 1217 aa18.65■□□□□ 0.58
CSNK1A1-202ENST00000377843 PREX1Q8TCU6 1659 aa18.65■□□□□ 0.58
CSNK1A1-202ENST00000377843 RAD50Q92878 1312 aa18.64■□□□□ 0.58
CSNK1A1-202ENST00000377843 ZFYVE9O95405 1425 aa18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 HNRNPH2P55795 449 aaKnown RBP18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 KIF1BPQ96EK5 621 aa18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 SNX14Q9Y5W7 946 aa18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 MAP3K11Q16584 847 aa18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 TTC6Q86TZ1 520 aa18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 EMILIN1Q9Y6C2 1016 aa18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 PIK3C2BO00750 1634 aa18.64■□□□□ 0.57
CSNK1A1-202ENST00000377843 TUBGCP6Q96RT7 1819 aa18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 HMMRO75330 724 aa18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 CYP2C19P33261 490 aa18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 MINK1Q8N4C8 1332 aaPredicted RBP18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 GJB2P29033 226 aa18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 IL13P35225 146 aa18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 NUP62CLQ9H1M0 184 aa18.63■□□□□ 0.57
CSNK1A1-202ENST00000377843 NPHP1O15259 732 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 NYAP1Q6ZVC0 841 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 ATP6V1DQ9Y5K8 247 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 AGLP35573 1532 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 F6X3S4 739 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 FAM173BQ6P4H8 233 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 CERS3Q8IU89 383 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 CLIP2Q9UDT6 1046 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 LIMCH1Q9UPQ0 1083 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 RPGRIP1LQ68CZ1 1315 aa18.62■□□□□ 0.57
CSNK1A1-202ENST00000377843 CCDC83Q8IWF9 413 aa18.61■□□□□ 0.57
CSNK1A1-202ENST00000377843 FEZ2Q9UHY8 353 aaPredicted RBP18.61■□□□□ 0.57
CSNK1A1-202ENST00000377843 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
CSNK1A1-202ENST00000377843 ST3GAL1Q11201 340 aa18.61■□□□□ 0.57
CSNK1A1-202ENST00000377843 GTF3C6Q969F1 213 aa18.61■□□□□ 0.57
CSNK1A1-202ENST00000377843 LRRCC1Q9C099 1032 aa18.61■□□□□ 0.57
CSNK1A1-202ENST00000377843 MAP4K4O95819 1239 aaPredicted RBP18.6■□□□□ 0.57
CSNK1A1-202ENST00000377843 NOL10Q9BSC4 688 aaKnown RBP18.6■□□□□ 0.57
CSNK1A1-202ENST00000377843 SLC4A10Q6U841 1118 aa18.6■□□□□ 0.57
CSNK1A1-202ENST00000377843 LRRN4CLQ8ND94 238 aa18.6■□□□□ 0.57
CSNK1A1-202ENST00000377843 TDRD7Q8NHU6 1098 aaKnown RBP18.6■□□□□ 0.57
CSNK1A1-202ENST00000377843 CPSF1Q10570 1443 aaKnown RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms