RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 NRXN3Q9Y4C0 1643 aa27.72■■■□□ 2.03
FOXA2-201ENST00000377115 TTC21BQ7Z4L5 1316 aa27.72■■■□□ 2.03
FOXA2-201ENST00000377115 STX6O43752 255 aa27.72■■■□□ 2.03
FOXA2-201ENST00000377115 SNX14Q9Y5W7 946 aa27.72■■■□□ 2.03
FOXA2-201ENST00000377115 DTNBO60941 627 aa27.71■■■□□ 2.03
FOXA2-201ENST00000377115 AK2P54819 239 aa27.71■■■□□ 2.03
FOXA2-201ENST00000377115 GIMAP6Q6P9H5 292 aa27.71■■■□□ 2.03
FOXA2-201ENST00000377115 TTC14Q96N46 770 aa27.71■■■□□ 2.03
FOXA2-201ENST00000377115 LETM1O95202 739 aaPredicted RBP27.71■■■□□ 2.03
FOXA2-201ENST00000377115 ARHGEF10O15013 1369 aa27.71■■■□□ 2.03
FOXA2-201ENST00000377115 RAD50Q92878 1312 aa27.7■■■□□ 2.03
FOXA2-201ENST00000377115 AP5Z1O43299 807 aa27.7■■■□□ 2.03
FOXA2-201ENST00000377115 RUFY3Q7L099 469 aa27.7■■■□□ 2.02
FOXA2-201ENST00000377115 RASEFQ8IZ41 740 aa27.7■■■□□ 2.02
FOXA2-201ENST00000377115 XRN1Q8IZH2 1706 aaKnown RBP27.7■■■□□ 2.02
FOXA2-201ENST00000377115 OVOS2A0A0J9YW53 1432 aa27.69■■■□□ 2.02
FOXA2-201ENST00000377115 OVOS2Q6IE36 1432 aa27.69■■■□□ 2.02
FOXA2-201ENST00000377115 F13A1P00488 732 aa27.69■■■□□ 2.02
FOXA2-201ENST00000377115 FUCA2Q9BTY2 467 aa27.69■■■□□ 2.02
FOXA2-201ENST00000377115 AOX1Q06278 1338 aa27.69■■■□□ 2.02
FOXA2-201ENST00000377115 KIF3AQ9Y496 699 aa27.68■■■□□ 2.02
FOXA2-201ENST00000377115 SGSM2O43147 1006 aa27.67■■■□□ 2.02
FOXA2-201ENST00000377115 EPB41L2O43491 1005 aaKnown RBP27.67■■■□□ 2.02
FOXA2-201ENST00000377115 CPA1P15085 419 aa27.67■■■□□ 2.02
FOXA2-201ENST00000377115 SOS1Q07889 1333 aaPredicted RBP27.67■■■□□ 2.02
FOXA2-201ENST00000377115 KCNF1Q9H3M0 494 aa27.67■■■□□ 2.02
FOXA2-201ENST00000377115 NUTM2FA1L443 756 aa27.66■■■□□ 2.02
FOXA2-201ENST00000377115 LARGE1O95461 756 aa27.66■■■□□ 2.02
FOXA2-201ENST00000377115 PI4K2BQ8TCG2 481 aa27.66■■■□□ 2.02
FOXA2-201ENST00000377115 LSG1Q9H089 658 aaKnown RBP27.66■■■□□ 2.02
FOXA2-201ENST00000377115 USP44Q9H0E7 712 aa27.66■■■□□ 2.02
FOXA2-201ENST00000377115 ZHX1Q9UKY1 873 aaPredicted RBP27.66■■■□□ 2.02
FOXA2-201ENST00000377115 LIMCH1Q9UPQ0 1083 aa27.66■■■□□ 2.02
FOXA2-201ENST00000377115 SMC3Q9UQE7 1217 aa27.66■■■□□ 2.02
FOXA2-201ENST00000377115 PYCARDQ9ULZ3 195 aa27.66■■■□□ 2.02
FOXA2-201ENST00000377115 FAM208AQ9UK61 1670 aaKnown RBP27.65■■■□□ 2.02
FOXA2-201ENST00000377115 CCDC30Q5VVM6 783 aa27.65■■■□□ 2.02
FOXA2-201ENST00000377115 BCL2L12Q9HB09 334 aa27.65■■■□□ 2.02
FOXA2-201ENST00000377115 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.65■■■□□ 2.02
FOXA2-201ENST00000377115 ZSCAN20P17040 1043 aaPredicted RBP27.65■■■□□ 2.02
FOXA2-201ENST00000377115 CBX1P83916 185 aa27.65■■■□□ 2.02
FOXA2-201ENST00000377115 ACEP12821 1306 aa27.64■■■□□ 2.02
FOXA2-201ENST00000377115 UBTFL1P0CB47 393 aaPredicted RBP27.63■■■□□ 2.01
FOXA2-201ENST00000377115 DNM1Q05193 864 aaKnown RBP27.63■■■□□ 2.01
FOXA2-201ENST00000377115 KIAA1524Q8TCG1 905 aa27.63■■■□□ 2.01
FOXA2-201ENST00000377115 SPATA31D1Q6ZQQ2 1576 aa27.63■■■□□ 2.01
FOXA2-201ENST00000377115 DMTNQ08495 405 aa27.63■■■□□ 2.01
FOXA2-201ENST00000377115 PPP4R3BQ5MIZ7 849 aa27.63■■■□□ 2.01
FOXA2-201ENST00000377115 SURF6O75683 361 aaKnown RBP27.62■■■□□ 2.01
FOXA2-201ENST00000377115 SPC24Q8NBT2 197 aa27.62■■■□□ 2.01
FOXA2-201ENST00000377115 ATP2B3Q16720 1220 aa27.62■■■□□ 2.01
FOXA2-201ENST00000377115 SSH3Q8TE77 659 aa27.62■■■□□ 2.01
FOXA2-201ENST00000377115 SPG7Q9UQ90 795 aa27.62■■■□□ 2.01
FOXA2-201ENST00000377115 CCDC83Q8IWF9 413 aa27.61■■■□□ 2.01
FOXA2-201ENST00000377115 CASTP20810 708 aaKnown RBP27.61■■■□□ 2.01
FOXA2-201ENST00000377115 CWC27Q6UX04 472 aaKnown RBP27.61■■■□□ 2.01
FOXA2-201ENST00000377115 ATP6V1DQ9Y5K8 247 aa27.61■■■□□ 2.01
FOXA2-201ENST00000377115 GJB2P29033 226 aa27.6■■■□□ 2.01
FOXA2-201ENST00000377115 PPP1R42Q7Z4L9 355 aa27.6■■■□□ 2.01
FOXA2-201ENST00000377115 RHPN1Q8TCX5 695 aa27.6■■■□□ 2.01
FOXA2-201ENST00000377115 MTMR6Q9Y217 621 aa27.6■■■□□ 2.01
FOXA2-201ENST00000377115 NALCNQ8IZF0 1738 aa27.59■■■□□ 2.01
FOXA2-201ENST00000377115 RIOK3O14730 519 aaKnown RBP27.58■■■□□ 2.01
FOXA2-201ENST00000377115 HYPKQ9NX55 129 aa27.58■■■□□ 2.01
FOXA2-201ENST00000377115 UTP14CQ5TAP6 766 aaKnown RBP27.58■■■□□ 2.01
FOXA2-201ENST00000377115 CEP170BQ9Y4F5 1589 aaPredicted RBP27.57■■■□□ 2
FOXA2-201ENST00000377115 TECPR2O15040 1411 aa27.57■■■□□ 2
FOXA2-201ENST00000377115 CNTROBQ8N137 903 aa27.57■■■□□ 2
FOXA2-201ENST00000377115 USP31Q70CQ4 1352 aa27.57■■■□□ 2
FOXA2-201ENST00000377115 USP6P35125 1406 aa27.57■■■□□ 2
FOXA2-201ENST00000377115 RAB11FIP3O75154 756 aa27.57■■■□□ 2
FOXA2-201ENST00000377115 EYA1Q99502 592 aa27.56■■■□□ 2
FOXA2-201ENST00000377115 KDRP35968 1356 aa27.55■■■□□ 2
FOXA2-201ENST00000377115 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
FOXA2-201ENST00000377115 POLA2Q14181 598 aa27.55■■■□□ 2
FOXA2-201ENST00000377115 ADCK5Q3MIX3 580 aa27.55■■■□□ 2
FOXA2-201ENST00000377115 PHAXQ9H814 394 aaKnown RBP27.55■■■□□ 2
FOXA2-201ENST00000377115 VPS37CA5D8V6 355 aaPredicted RBP27.55■■■□□ 2
FOXA2-201ENST00000377115 SIRT1Q96EB6 747 aa27.55■■■□□ 2
FOXA2-201ENST00000377115 FMN2Q9NZ56 1722 aa27.54■■■□□ 2
FOXA2-201ENST00000377115 N4BP2Q86UW6 1770 aaPredicted RBP27.54■■■□□ 2
FOXA2-201ENST00000377115 SRGAP3O43295 1099 aa27.53■■■□□ 2
FOXA2-201ENST00000377115 ST3GAL1Q11201 340 aa27.53■■■□□ 2
FOXA2-201ENST00000377115 PDCL2Q8N4E4 241 aa27.53■■■□□ 2
FOXA2-201ENST00000377115 DIAPH3Q9NSV4 1193 aa27.53■■■□□ 2
FOXA2-201ENST00000377115 CHAF1AQ13111 956 aaPredicted RBP27.53■■■□□ 2
FOXA2-201ENST00000377115 PXDNLA1KZ92 1463 aa27.53■■■□□ 2
FOXA2-201ENST00000377115 SPDYE4A6NLX3 237 aa27.52■■■□□ 2
FOXA2-201ENST00000377115 CCDC192P0DO97 292 aa27.52■■■□□ 2
FOXA2-201ENST00000377115 PTH1RQ03431 593 aa27.52■■■□□ 2
FOXA2-201ENST00000377115 DDX54Q8TDD1 881 aaKnown RBP27.52■■■□□ 2
FOXA2-201ENST00000377115 KIF1BPQ96EK5 621 aa27.52■■■□□ 2
FOXA2-201ENST00000377115 JAKMIP1Q96N16 626 aaKnown RBP27.52■■■□□ 2
FOXA2-201ENST00000377115 CHMP3Q9Y3E7 222 aa27.52■■■□□ 2
FOXA2-201ENST00000377115 MLECQ14165 292 aa27.52■■■□□ 2
FOXA2-201ENST00000377115 PDRG1Q9NUG6 133 aa27.52■■■□□ 2
FOXA2-201ENST00000377115 LRRC37A3O60309 1634 aa27.51■■□□□ 1.99
FOXA2-201ENST00000377115 TPM3P06753 285 aa27.51■■□□□ 1.99
FOXA2-201ENST00000377115 PTGS1P23219 599 aa27.51■■□□□ 1.99
FOXA2-201ENST00000377115 IGSF1Q8N6C5 1336 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms