RNA–Protein interactions for RNA: ENST00000375604.6

MCF2L-203, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS P3 TSL 2 BASIC

Gene MCF2L, Length 6,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-203ENST00000375604 TAF3Q5VWG9 929 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 PANK2Q9BZ23 570 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 ABCC5O15440 1437 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 CABLES1Q8TDN4 633 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 PLCD4Q9BRC7 762 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 SLC12A7Q9Y666 1083 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 KIAA1328Q86T90 577 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 SLC39A6Q13433 755 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 CFAP100Q494V2 611 aa20.06■□□□□ 0.8
MCF2L-203ENST00000375604 U3KPZ7 1027 aaPredicted RBP20.06■□□□□ 0.8
MCF2L-203ENST00000375604 TNNT1P13805 278 aa20.05■□□□□ 0.8
MCF2L-203ENST00000375604 DISP3Q9P2K9 1392 aa20.05■□□□□ 0.8
MCF2L-203ENST00000375604 KRT32Q14532 448 aa20.05■□□□□ 0.8
MCF2L-203ENST00000375604 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
MCF2L-203ENST00000375604 RAB11FIP3O75154 756 aa20.05■□□□□ 0.8
MCF2L-203ENST00000375604 MAP3K12Q12852 859 aa20.05■□□□□ 0.8
MCF2L-203ENST00000375604 SEPT7Q16181 437 aaKnown RBP20.05■□□□□ 0.8
MCF2L-203ENST00000375604 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
MCF2L-203ENST00000375604 ACEP12821 1306 aa20.05■□□□□ 0.8
MCF2L-203ENST00000375604 ERCC4Q92889 916 aaPredicted RBP20.04■□□□□ 0.8
MCF2L-203ENST00000375604 IFIT3O14879 490 aaKnown RBP20.04■□□□□ 0.8
MCF2L-203ENST00000375604 AMOTQ4VCS5 1084 aa20.04■□□□□ 0.8
MCF2L-203ENST00000375604 GLRX3O76003 335 aaKnown RBP20.04■□□□□ 0.8
MCF2L-203ENST00000375604 CPLX3Q8WVH0 158 aa20.04■□□□□ 0.8
MCF2L-203ENST00000375604 WASF1Q92558 559 aa20.04■□□□□ 0.8
MCF2L-203ENST00000375604 NEBLO76041 1014 aa20.04■□□□□ 0.8
MCF2L-203ENST00000375604 GOLGA8BA8MQT2 603 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 TRIM27P14373 513 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 FLIIQ13045 1269 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 UBE3BQ7Z3V4 1068 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 CKAP2LQ8IYA6 745 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 TSPYL1Q9H0U9 437 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 ZRANB1Q9UGI0 708 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 CCP110O43303 1012 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 NLRP5P59047 1200 aa20.03■□□□□ 0.8
MCF2L-203ENST00000375604 GOLGA8AA7E2F4 631 aa20.02■□□□□ 0.8
MCF2L-203ENST00000375604 SSRP1Q08945 709 aaKnown RBP20.02■□□□□ 0.8
MCF2L-203ENST00000375604 CBFA2T2O43439 604 aa20.02■□□□□ 0.8
MCF2L-203ENST00000375604 RFC4P35249 363 aa20.02■□□□□ 0.8
MCF2L-203ENST00000375604 SSFA2P28290 1259 aa20.02■□□□□ 0.8
MCF2L-203ENST00000375604 BIN1O00499 593 aa20.02■□□□□ 0.79
MCF2L-203ENST00000375604 C8orf76Q96K31 380 aa20.02■□□□□ 0.79
MCF2L-203ENST00000375604 PI4KAP2A4QPH2 592 aa20.01■□□□□ 0.79
MCF2L-203ENST00000375604 PI4KAP1Q8N8J0 262 aa20.01■□□□□ 0.79
MCF2L-203ENST00000375604 TFIP11Q9UBB9 837 aaKnown RBP20.01■□□□□ 0.79
MCF2L-203ENST00000375604 NKTRP30414 1462 aaKnown RBP20.01■□□□□ 0.79
MCF2L-203ENST00000375604 HYPKQ9NX55 129 aa20.01■□□□□ 0.79
MCF2L-203ENST00000375604 LDHAL6AQ6ZMR3 332 aa20.01■□□□□ 0.79
MCF2L-203ENST00000375604 ERLIN2O94905 339 aa20.01■□□□□ 0.79
MCF2L-203ENST00000375604 HSP90AB3PQ58FF7 597 aa20.01■□□□□ 0.79
MCF2L-203ENST00000375604 LRRC2Q9BYS8 371 aa20.01■□□□□ 0.79
MCF2L-203ENST00000375604 C8orf37Q96NL8 207 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 UQCRHLA0A096LP55 91 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 UQCRHP07919 91 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 MAP3K11Q16584 847 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 CHPF2Q9P2E5 772 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 CEP131Q9UPN4 1083 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 KIAA0586Q9BVV6 1533 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 MMRN2Q9H8L6 949 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 MCM4P33991 863 aa20■□□□□ 0.79
MCF2L-203ENST00000375604 SPTY2D1Q68D10 685 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-203ENST00000375604 CCDC112Q8NEF3 446 aa19.99■□□□□ 0.79
MCF2L-203ENST00000375604 LRRC59Q96AG4 307 aaKnown RBP19.99■□□□□ 0.79
MCF2L-203ENST00000375604 DBF4Q9UBU7 674 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-203ENST00000375604 CWC25Q9NXE8 425 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-203ENST00000375604 EPB41L2O43491 1005 aaKnown RBP19.99■□□□□ 0.79
MCF2L-203ENST00000375604 CTCFLQ8NI51 663 aaPredicted RBP19.99■□□□□ 0.79
MCF2L-203ENST00000375604 GOLGA6L10A6NI86 522 aa19.98■□□□□ 0.79
MCF2L-203ENST00000375604 JAG2Q9Y219 1238 aa19.98■□□□□ 0.79
MCF2L-203ENST00000375604 IGHDP01880 384 aa19.98■□□□□ 0.79
MCF2L-203ENST00000375604 ATP6V1AP38606 617 aa19.98■□□□□ 0.79
MCF2L-203ENST00000375604 GJB2P29033 226 aa19.98■□□□□ 0.79
MCF2L-203ENST00000375604 PPP1R42Q7Z4L9 355 aa19.98■□□□□ 0.79
MCF2L-203ENST00000375604 PICALMQ13492 652 aa19.97■□□□□ 0.79
MCF2L-203ENST00000375604 TNIP1Q15025 636 aa19.97■□□□□ 0.79
MCF2L-203ENST00000375604 DDX46Q7L014 1031 aaKnown RBP19.97■□□□□ 0.79
MCF2L-203ENST00000375604 MICU3Q86XE3 530 aa19.97■□□□□ 0.79
MCF2L-203ENST00000375604 ALDH1L2Q3SY69 923 aa19.97■□□□□ 0.79
MCF2L-203ENST00000375604 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.97■□□□□ 0.79
MCF2L-203ENST00000375604 IFNL2Q8IZJ0 200 aa19.96■□□□□ 0.79
MCF2L-203ENST00000375604 TMEM67Q5HYA8 995 aa19.96■□□□□ 0.79
MCF2L-203ENST00000375604 CUL5Q93034 780 aa19.96■□□□□ 0.79
MCF2L-203ENST00000375604 RBM27Q9P2N5 1060 aaKnown RBP19.96■□□□□ 0.79
MCF2L-203ENST00000375604 FEZ1Q99689 392 aa19.96■□□□□ 0.79
MCF2L-203ENST00000375604 IQCA1Q86XH1 822 aa19.96■□□□□ 0.79
MCF2L-203ENST00000375604 ZNF287Q9HBT7 754 aa19.96■□□□□ 0.79
MCF2L-203ENST00000375604 SMTNL1A8MU46 457 aa19.95■□□□□ 0.78
MCF2L-203ENST00000375604 TCEANC2Q96MN5 208 aa19.95■□□□□ 0.78
MCF2L-203ENST00000375604 TSPY2A6NKD2 308 aa19.95■□□□□ 0.78
MCF2L-203ENST00000375604 LUC7LQ9NQ29 371 aaKnown RBP19.95■□□□□ 0.78
MCF2L-203ENST00000375604 PPM1FP49593 454 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-203ENST00000375604 NBPF6Q5VWK0 638 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 NBPF5PQ86XG9 351 aaPredicted RBP19.94■□□□□ 0.78
MCF2L-203ENST00000375604 NBPF4Q96M43 638 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 CATIPQ7Z7H3 387 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 SLC26A6Q9BXS9 759 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 TRMT1Q9NXH9 659 aaKnown RBP19.94■□□□□ 0.78
MCF2L-203ENST00000375604 LEKR1Q6ZMV7 388 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 SAMM50Q9Y512 469 aa19.94■□□□□ 0.78
MCF2L-203ENST00000375604 FANCAO15360 1455 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms