RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 DCTN1Q14203 1278 aa20.31■□□□□ 0.84
APOA1-205ENST00000375329 MIER1Q8N108 512 aa20.31■□□□□ 0.84
APOA1-205ENST00000375329 NPM2Q86SE8 214 aaKnown RBP20.3■□□□□ 0.84
APOA1-205ENST00000375329 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
APOA1-205ENST00000375329 GYS1P13807 737 aa20.29■□□□□ 0.84
APOA1-205ENST00000375329 A0A087WZG4 1122 aa20.28■□□□□ 0.84
APOA1-205ENST00000375329 MMP10P09238 476 aa20.28■□□□□ 0.84
APOA1-205ENST00000375329 SNRPA1P09661 255 aaKnown RBP20.28■□□□□ 0.84
APOA1-205ENST00000375329 USP42Q9H9J4 1324 aaKnown RBP20.27■□□□□ 0.84
APOA1-205ENST00000375329 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
APOA1-205ENST00000375329 RIPK4P57078 832 aa20.27■□□□□ 0.84
APOA1-205ENST00000375329 RUNDC1Q96C34 613 aa20.27■□□□□ 0.84
APOA1-205ENST00000375329 ZBTB1Q9Y2K1 713 aa20.27■□□□□ 0.84
APOA1-205ENST00000375329 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
APOA1-205ENST00000375329 COL15A1P39059 1388 aa20.26■□□□□ 0.83
APOA1-205ENST00000375329 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
APOA1-205ENST00000375329 GPR162Q16538 588 aa20.26■□□□□ 0.83
APOA1-205ENST00000375329 NARFQ9UHQ1 456 aa20.26■□□□□ 0.83
APOA1-205ENST00000375329 KCNQ3O43525 872 aa20.25■□□□□ 0.83
APOA1-205ENST00000375329 TMPOP42166 694 aaKnown RBP20.25■□□□□ 0.83
APOA1-205ENST00000375329 IL6STP40189 918 aaPredicted RBP20.24■□□□□ 0.83
APOA1-205ENST00000375329 EIF5P55010 431 aaKnown RBP20.24■□□□□ 0.83
APOA1-205ENST00000375329 NLGN2Q8NFZ4 835 aa20.24■□□□□ 0.83
APOA1-205ENST00000375329 SRP68Q9UHB9 627 aaKnown RBP20.24■□□□□ 0.83
APOA1-205ENST00000375329 ADAMTS8Q9UP79 889 aa20.24■□□□□ 0.83
APOA1-205ENST00000375329 BABAM1Q9NWV8 329 aa20.23■□□□□ 0.83
APOA1-205ENST00000375329 USPL1Q5W0Q7 1092 aa20.22■□□□□ 0.83
APOA1-205ENST00000375329 CCDC146Q8IYE0 955 aa20.22■□□□□ 0.83
APOA1-205ENST00000375329 GRIN3BO60391 1043 aa20.21■□□□□ 0.83
APOA1-205ENST00000375329 FKBP8Q14318 412 aa20.21■□□□□ 0.83
APOA1-205ENST00000375329 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
APOA1-205ENST00000375329 A1BGP04217 495 aa20.2■□□□□ 0.82
APOA1-205ENST00000375329 THUMPD2Q9BTF0 503 aaKnown RBP20.2■□□□□ 0.82
APOA1-205ENST00000375329 MIS18AQ9NYP9 233 aa20.2■□□□□ 0.82
APOA1-205ENST00000375329 ZNF330Q9Y3S2 320 aaPredicted RBP20.2■□□□□ 0.82
APOA1-205ENST00000375329 USP16Q9Y5T5 823 aa20.2■□□□□ 0.82
APOA1-205ENST00000375329 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
APOA1-205ENST00000375329 TGFB2P61812 414 aa20.19■□□□□ 0.82
APOA1-205ENST00000375329 NEUROD2Q15784 382 aa20.19■□□□□ 0.82
APOA1-205ENST00000375329 CCDC184Q52MB2 194 aa20.19■□□□□ 0.82
APOA1-205ENST00000375329 TM4SF1P30408 202 aa20.18■□□□□ 0.82
APOA1-205ENST00000375329 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
APOA1-205ENST00000375329 EIF4A1P60842 406 aaKnown RBP20.17■□□□□ 0.82
APOA1-205ENST00000375329 RRP7AQ9Y3A4 280 aaKnown RBP20.17■□□□□ 0.82
APOA1-205ENST00000375329 KIF13BQ9NQT8 1826 aa20.17■□□□□ 0.82
APOA1-205ENST00000375329 GIGYF1O75420 1035 aaPredicted RBP20.16■□□□□ 0.82
APOA1-205ENST00000375329 ZNF784Q8NCA9 323 aaPredicted RBP20.16■□□□□ 0.82
APOA1-205ENST00000375329 C10orf71Q711Q0 1435 aa20.16■□□□□ 0.82
APOA1-205ENST00000375329 MRS2Q9HD23 443 aa20.15■□□□□ 0.82
APOA1-205ENST00000375329 TBC1D2BQ9UPU7 963 aa20.15■□□□□ 0.82
APOA1-205ENST00000375329 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
APOA1-205ENST00000375329 PRAMEF22A3QJZ6 481 aa20.14■□□□□ 0.81
APOA1-205ENST00000375329 CCER2I3L3R5 266 aa20.14■□□□□ 0.81
APOA1-205ENST00000375329 POLRMTO00411 1230 aaKnown RBP20.14■□□□□ 0.81
APOA1-205ENST00000375329 DDR1Q08345 913 aa20.14■□□□□ 0.81
APOA1-205ENST00000375329 NFIXQ14938 502 aa20.14■□□□□ 0.81
APOA1-205ENST00000375329 DZIP3Q86Y13 1208 aaKnown RBP20.14■□□□□ 0.81
APOA1-205ENST00000375329 LAMB4A4D0S4 1761 aa20.13■□□□□ 0.81
APOA1-205ENST00000375329 CALD1Q05682 793 aaKnown RBP20.13■□□□□ 0.81
APOA1-205ENST00000375329 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
APOA1-205ENST00000375329 ZNF652Q9Y2D9 606 aa20.13■□□□□ 0.81
APOA1-205ENST00000375329 RGL2O15211 777 aa20.12■□□□□ 0.81
APOA1-205ENST00000375329 CLEC4GQ6UXB4 293 aa20.12■□□□□ 0.81
APOA1-205ENST00000375329 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
APOA1-205ENST00000375329 ERBB4Q15303 1308 aa20.11■□□□□ 0.81
APOA1-205ENST00000375329 APAF1O14727 1248 aa20.11■□□□□ 0.81
APOA1-205ENST00000375329 SERPINB2P05120 415 aa20.11■□□□□ 0.81
APOA1-205ENST00000375329 YBX3P16989 372 aaKnown RBP eCLIP20.11■□□□□ 0.81
APOA1-205ENST00000375329 SCN7AQ01118 1682 aa20.1■□□□□ 0.81
APOA1-205ENST00000375329 CHL1O00533 1208 aa20.1■□□□□ 0.81
APOA1-205ENST00000375329 CAMTA2O94983 1202 aa20.1■□□□□ 0.81
APOA1-205ENST00000375329 SETDB2Q96T68 719 aa20.1■□□□□ 0.81
APOA1-205ENST00000375329 PXDNLA1KZ92 1463 aa20.1■□□□□ 0.81
APOA1-205ENST00000375329 AFDNP55196 1824 aaKnown RBP20.09■□□□□ 0.81
APOA1-205ENST00000375329 A0A0G2JLW4 131 aa20.09■□□□□ 0.81
APOA1-205ENST00000375329 NBPF26B4DH59 902 aa20.09■□□□□ 0.81
APOA1-205ENST00000375329 NBPF10Q6P3W6 841 aaKnown RBP20.09■□□□□ 0.81
APOA1-205ENST00000375329 BICDL1Q6ZP65 573 aa20.09■□□□□ 0.81
APOA1-205ENST00000375329 NBPF15Q8N660 670 aa20.09■□□□□ 0.81
APOA1-205ENST00000375329 LAS1LQ9Y4W2 734 aaKnown RBP20.09■□□□□ 0.81
APOA1-205ENST00000375329 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.81
APOA1-205ENST00000375329 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.81
APOA1-205ENST00000375329 DPEP1P16444 411 aa20.08■□□□□ 0.81
APOA1-205ENST00000375329 PIP4K2AP48426 406 aaPredicted RBP20.08■□□□□ 0.81
APOA1-205ENST00000375329 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.81
APOA1-205ENST00000375329 CFAP44Q96MT7 982 aa20.08■□□□□ 0.81
APOA1-205ENST00000375329 PDZRN3Q9UPQ7 1066 aa20.08■□□□□ 0.81
APOA1-205ENST00000375329 N4BP2Q86UW6 1770 aaPredicted RBP20.08■□□□□ 0.8
APOA1-205ENST00000375329 PIM2Q9P1W9 311 aa20.07■□□□□ 0.8
APOA1-205ENST00000375329 UTRNP46939 3433 aa20.07■□□□□ 0.8
APOA1-205ENST00000375329 NRXN2Q9P2S2 1712 aa20.07■□□□□ 0.8
APOA1-205ENST00000375329 BCORQ6W2J9 1755 aa20.06■□□□□ 0.8
APOA1-205ENST00000375329 NPHP1O15259 732 aa20.06■□□□□ 0.8
APOA1-205ENST00000375329 KIF6Q6ZMV9 814 aa20.06■□□□□ 0.8
APOA1-205ENST00000375329 GNAI1P63096 354 aa20.05■□□□□ 0.8
APOA1-205ENST00000375329 BCS1LQ9Y276 419 aa20.05■□□□□ 0.8
APOA1-205ENST00000375329 KIAA1551Q9HCM1 1747 aa20.05■□□□□ 0.8
APOA1-205ENST00000375329 ERVV-1B6SEH8 477 aa20.04■□□□□ 0.8
APOA1-205ENST00000375329 HOXB7P09629 217 aa20.04■□□□□ 0.8
APOA1-205ENST00000375329 EIF2S2P20042 333 aaKnown RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms