RNA–Protein interactions for RNA: ENST00000375120.3

OTUD3-201, Transcript of OTU deubiquitinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OTUD3, Length 6,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3-201ENST00000375120 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
OTUD3-201ENST00000375120 SOGA3Q5TF21 947 aa18.1■□□□□ 0.49
OTUD3-201ENST00000375120 CCDC8Q9H0W5 538 aaPredicted RBP18.1■□□□□ 0.49
OTUD3-201ENST00000375120 SNX21Q969T3 373 aa18.1■□□□□ 0.49
OTUD3-201ENST00000375120 RPRD2Q5VT52 1461 aaKnown RBP18.1■□□□□ 0.49
OTUD3-201ENST00000375120 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
OTUD3-201ENST00000375120 IDH1O75874 414 aaKnown RBP18.1■□□□□ 0.49
OTUD3-201ENST00000375120 CCDC186Q7Z3E2 898 aa18.1■□□□□ 0.49
OTUD3-201ENST00000375120 ZFP91Q96JP5 570 aaPredicted RBP18.1■□□□□ 0.49
OTUD3-201ENST00000375120 CNPY2Q9Y2B0 182 aa18.1■□□□□ 0.49
OTUD3-201ENST00000375120 ZSCAN22P10073 491 aaPredicted RBP18.09■□□□□ 0.49
OTUD3-201ENST00000375120 CABP4P57796 275 aa18.09■□□□□ 0.49
OTUD3-201ENST00000375120 DISP3Q9P2K9 1392 aa18.09■□□□□ 0.49
OTUD3-201ENST00000375120 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
OTUD3-201ENST00000375120 USP48Q86UV5 1035 aa18.09■□□□□ 0.49
OTUD3-201ENST00000375120 CCT2P78371 535 aaKnown RBP18.09■□□□□ 0.49
OTUD3-201ENST00000375120 CCDC171Q6TFL3 1326 aa18.09■□□□□ 0.49
OTUD3-201ENST00000375120 ZSWIM4Q9H7M6 989 aa18.09■□□□□ 0.49
OTUD3-201ENST00000375120 CNNM3Q8NE01 707 aa18.08■□□□□ 0.49
OTUD3-201ENST00000375120 POTEB2H3BUK9 544 aa18.08■□□□□ 0.49
OTUD3-201ENST00000375120 RRAGDQ9NQL2 400 aaPredicted RBP18.08■□□□□ 0.49
OTUD3-201ENST00000375120 RNF187Q5TA31 235 aaPredicted RBP18.08■□□□□ 0.48
OTUD3-201ENST00000375120 NUP88Q99567 741 aaPredicted RBP18.08■□□□□ 0.48
OTUD3-201ENST00000375120 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.48
OTUD3-201ENST00000375120 EPRSP07814 1512 aaKnown RBP18.08■□□□□ 0.48
OTUD3-201ENST00000375120 HMGB1P09429 215 aaKnown RBP18.07■□□□□ 0.48
OTUD3-201ENST00000375120 RAB3GAP1Q15042 981 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 CYB5RLQ6IPT4 315 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 GPATCH11Q8N954 259 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 CCDC94Q9BW85 323 aaPredicted RBP18.07■□□□□ 0.48
OTUD3-201ENST00000375120 SDSP20132 328 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 GNG11P61952 73 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 AIDAQ96BJ3 306 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 CCDC85AQ96PX6 553 aaPredicted RBP18.07■□□□□ 0.48
OTUD3-201ENST00000375120 BMP2KQ9NSY1 1161 aaPredicted RBP18.07■□□□□ 0.48
OTUD3-201ENST00000375120 ABCC5O15440 1437 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 CAVIN2O95810 425 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 CCDC150Q8NCX0 1101 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 TAF7Q15545 349 aaPredicted RBP18.07■□□□□ 0.48
OTUD3-201ENST00000375120 ATF3P18847 181 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 FAM107BQ9H098 131 aa18.07■□□□□ 0.48
OTUD3-201ENST00000375120 SKILP12757 684 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 INCENPQ9NQS7 918 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 ANO6Q4KMQ2 910 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 EMILIN1Q9Y6C2 1016 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 FAM200AQ8TCP9 573 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 DNA2P51530 1060 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 ATP2B2Q01814 1243 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 ISM2Q6H9L7 571 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 IPO4Q8TEX9 1081 aaKnown RBP18.06■□□□□ 0.48
OTUD3-201ENST00000375120 SLC52A1Q9NWF4 448 aa18.06■□□□□ 0.48
OTUD3-201ENST00000375120 SEC24BO95487 1268 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 HS1BP3Q53T59 392 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 GOLGA6L9A6NEM1 432 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 CCDC12Q8WUD4 166 aaPredicted RBP18.05■□□□□ 0.48
OTUD3-201ENST00000375120 MPHOSPH8Q99549 860 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 PTPRCP08575 1304 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 CTR9Q6PD62 1173 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 LUZP1Q86V48 1076 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 SMC5Q8IY18 1101 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 CCDC113Q9H0I3 377 aa18.05■□□□□ 0.48
OTUD3-201ENST00000375120 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.05■□□□□ 0.48
OTUD3-201ENST00000375120 V9GYY5 206 aaPredicted RBP18.05■□□□□ 0.48
OTUD3-201ENST00000375120 YEATS4O95619 227 aa18.04■□□□□ 0.48
OTUD3-201ENST00000375120 FKBP15Q5T1M5 1219 aa18.04■□□□□ 0.48
OTUD3-201ENST00000375120 DYDC1Q8WWB3 177 aa18.04■□□□□ 0.48
OTUD3-201ENST00000375120 PPFIA3O75145 1194 aa18.04■□□□□ 0.48
OTUD3-201ENST00000375120 EVI5LQ96CN4 794 aa18.04■□□□□ 0.48
OTUD3-201ENST00000375120 GOLGA8BA8MQT2 603 aa18.04■□□□□ 0.48
OTUD3-201ENST00000375120 MICALCLQ6ZW33 695 aa18.04■□□□□ 0.48
OTUD3-201ENST00000375120 MAPKBP1O60336 1514 aa18.04■□□□□ 0.48
OTUD3-201ENST00000375120 ECHDC1Q9NTX5 307 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 CCDC141Q6ZP82 1450 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 PAFAH1B1P43034 410 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 MAP2K1Q02750 393 aaPredicted RBP18.03■□□□□ 0.48
OTUD3-201ENST00000375120 MBIPQ9NS73 344 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 CCDC82Q8N4S0 544 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 NECAB1Q8N987 351 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 NUDT16Q96DE0 195 aaKnown RBP18.03■□□□□ 0.48
OTUD3-201ENST00000375120 LIG1P18858 919 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 GTPBP4Q9BZE4 634 aaKnown RBP18.03■□□□□ 0.48
OTUD3-201ENST00000375120 IGSF3O75054 1194 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 IFIT1P09914 478 aaKnown RBP18.03■□□□□ 0.48
OTUD3-201ENST00000375120 FAM69CQ0P6D2 419 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 FLIIQ13045 1269 aa18.03■□□□□ 0.48
OTUD3-201ENST00000375120 ANKRD18AQ8IVF6 992 aa18.02■□□□□ 0.48
OTUD3-201ENST00000375120 DNAAF4Q8WXU2 420 aa18.02■□□□□ 0.48
OTUD3-201ENST00000375120 NME9Q86XW9 330 aa18.02■□□□□ 0.48
OTUD3-201ENST00000375120 DNAI1Q9UI46 699 aa18.02■□□□□ 0.48
OTUD3-201ENST00000375120 POLR3DP05423 398 aaPredicted RBP18.02■□□□□ 0.47
OTUD3-201ENST00000375120 CACNA2D4Q7Z3S7 1137 aa18.02■□□□□ 0.47
OTUD3-201ENST00000375120 LRP2BPQ9P2M1 347 aa18.02■□□□□ 0.47
OTUD3-201ENST00000375120 USO1O60763 962 aaKnown RBP18.01■□□□□ 0.47
OTUD3-201ENST00000375120 BCCIPQ9P287 314 aaKnown RBP eCLIP18.01■□□□□ 0.47
OTUD3-201ENST00000375120 TNNQ9UQP3 1299 aa18.01■□□□□ 0.47
OTUD3-201ENST00000375120 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
OTUD3-201ENST00000375120 IFFO1Q0D2I5 559 aa18.01■□□□□ 0.47
OTUD3-201ENST00000375120 TICAM2Q86XR7 235 aa18.01■□□□□ 0.47
OTUD3-201ENST00000375120 BBXQ8WY36 941 aaPredicted RBP18.01■□□□□ 0.47
OTUD3-201ENST00000375120 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms