RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 GIGYF1O75420 1035 aaPredicted RBP20.77■□□□□ 0.92
PHF1-202ENST00000374516 SPG7Q9UQ90 795 aa20.77■□□□□ 0.92
PHF1-202ENST00000374516 COL18A1P39060 1754 aa20.77■□□□□ 0.92
PHF1-202ENST00000374516 KDM3BQ7LBC6 1761 aa20.77■□□□□ 0.92
PHF1-202ENST00000374516 PHKG2P15735 406 aa20.77■□□□□ 0.92
PHF1-202ENST00000374516 NFATC2IPQ8NCF5 419 aa20.77■□□□□ 0.92
PHF1-202ENST00000374516 OTUD7AQ8TE49 926 aaPredicted RBP20.77■□□□□ 0.92
PHF1-202ENST00000374516 PRDM11Q9NQV5 511 aa20.77■□□□□ 0.92
PHF1-202ENST00000374516 FOXD4L1Q9NU39 408 aa20.77■□□□□ 0.92
PHF1-202ENST00000374516 PI4KAP2A4QPH2 592 aa20.76■□□□□ 0.91
PHF1-202ENST00000374516 PLEKHM2Q8IWE5 1019 aa20.76■□□□□ 0.91
PHF1-202ENST00000374516 PI4KAP1Q8N8J0 262 aa20.76■□□□□ 0.91
PHF1-202ENST00000374516 USP44Q9H0E7 712 aa20.76■□□□□ 0.91
PHF1-202ENST00000374516 GNAI3P08754 354 aa20.76■□□□□ 0.91
PHF1-202ENST00000374516 TBC1D9Q6ZT07 1266 aa20.76■□□□□ 0.91
PHF1-202ENST00000374516 SOS2Q07890 1332 aaPredicted RBP20.75■□□□□ 0.91
PHF1-202ENST00000374516 HMMRO75330 724 aa20.75■□□□□ 0.91
PHF1-202ENST00000374516 CPDO75976 1380 aa20.75■□□□□ 0.91
PHF1-202ENST00000374516 PROSER3Q2NL68 480 aa20.75■□□□□ 0.91
PHF1-202ENST00000374516 LRRFIP2Q9Y608 721 aaKnown RBP20.75■□□□□ 0.91
PHF1-202ENST00000374516 PNMA6EA0A0J9YXQ4 647 aa20.74■□□□□ 0.91
PHF1-202ENST00000374516 RBM42Q9BTD8 480 aaKnown RBP20.74■□□□□ 0.91
PHF1-202ENST00000374516 CACNA1FO60840 1977 aa20.74■□□□□ 0.91
PHF1-202ENST00000374516 CYP27B1O15528 508 aa20.73■□□□□ 0.91
PHF1-202ENST00000374516 IFNL2Q8IZJ0 200 aa20.73■□□□□ 0.91
PHF1-202ENST00000374516 SLC52A2Q9HAB3 445 aa20.73■□□□□ 0.91
PHF1-202ENST00000374516 DBF4Q9UBU7 674 aaPredicted RBP20.73■□□□□ 0.91
PHF1-202ENST00000374516 EXOC6BQ9Y2D4 811 aa20.73■□□□□ 0.91
PHF1-202ENST00000374516 OVOS2A0A0G2JMS6 1433 aa20.73■□□□□ 0.91
PHF1-202ENST00000374516 KDM6AO15550 1401 aaPredicted RBP20.73■□□□□ 0.91
PHF1-202ENST00000374516 CLEC17AQ6ZS10 378 aa20.73■□□□□ 0.91
PHF1-202ENST00000374516 SRCIN1Q9C0H9 1055 aa20.73■□□□□ 0.91
PHF1-202ENST00000374516 GSPT1P15170 499 aaKnown RBP20.72■□□□□ 0.91
PHF1-202ENST00000374516 ZNF790Q6PG37 636 aa20.72■□□□□ 0.91
PHF1-202ENST00000374516 UBTFL1P0CB47 393 aaPredicted RBP20.72■□□□□ 0.91
PHF1-202ENST00000374516 SSFA2P28290 1259 aa20.72■□□□□ 0.91
PHF1-202ENST00000374516 CHMP4AQ9BY43 222 aa20.72■□□□□ 0.91
PHF1-202ENST00000374516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.72■□□□□ 0.913e-6■■□□□ 13.2
PHF1-202ENST00000374516 TOM1L2Q6ZVM7 507 aa20.71■□□□□ 0.91
PHF1-202ENST00000374516 DNAAF4Q8WXU2 420 aa20.71■□□□□ 0.91
PHF1-202ENST00000374516 HEG1Q9ULI3 1381 aa20.71■□□□□ 0.91
PHF1-202ENST00000374516 GOLGA6L22H0YM25 854 aa20.71■□□□□ 0.91
PHF1-202ENST00000374516 CRYBG1Q9Y4K1 1723 aa20.7■□□□□ 0.9
PHF1-202ENST00000374516 ATP8B2P98198 1209 aa20.7■□□□□ 0.9
PHF1-202ENST00000374516 NBPF7P0C2Y1 421 aaPredicted RBP20.7■□□□□ 0.9
PHF1-202ENST00000374516 CCDC173Q0VFZ6 552 aa20.7■□□□□ 0.9
PHF1-202ENST00000374516 BEND3Q5T5X7 828 aa20.7■□□□□ 0.9
PHF1-202ENST00000374516 PPP1R9BQ96SB3 815 aa20.7■□□□□ 0.9
PHF1-202ENST00000374516 ADCY9O60503 1353 aa20.69■□□□□ 0.9
PHF1-202ENST00000374516 KLHL40Q2TBA0 621 aa20.69■□□□□ 0.9
PHF1-202ENST00000374516 NASPP49321 788 aaPredicted RBP20.68■□□□□ 0.9
PHF1-202ENST00000374516 AIMP1Q12904 312 aaKnown RBP20.68■□□□□ 0.9
PHF1-202ENST00000374516 DCAF5Q96JK2 942 aa20.68■□□□□ 0.9
PHF1-202ENST00000374516 STRN4Q9NRL3 753 aa20.68■□□□□ 0.9
PHF1-202ENST00000374516 PXDNLA1KZ92 1463 aa20.68■□□□□ 0.9
PHF1-202ENST00000374516 BAG4O95429 457 aaKnown RBP20.67■□□□□ 0.9
PHF1-202ENST00000374516 TTC22Q5TAA0 569 aa20.67■□□□□ 0.9
PHF1-202ENST00000374516 MAP3K2Q9Y2U5 619 aa20.67■□□□□ 0.9
PHF1-202ENST00000374516 DDX49Q9Y6V7 483 aaKnown RBP20.67■□□□□ 0.9
PHF1-202ENST00000374516 WDR17Q8IZU2 1322 aa20.67■□□□□ 0.9
PHF1-202ENST00000374516 ZNF496Q96IT1 587 aaPredicted RBP20.67■□□□□ 0.9
PHF1-202ENST00000374516 CDC45O75419 566 aa20.66■□□□□ 0.9
PHF1-202ENST00000374516 IBTKQ9P2D0 1353 aaPredicted RBP20.66■□□□□ 0.9
PHF1-202ENST00000374516 SIPA1L3O60292 1781 aaPredicted RBP20.66■□□□□ 0.9
PHF1-202ENST00000374516 ADAMTS7Q9UKP4 1686 aa20.65■□□□□ 0.9
PHF1-202ENST00000374516 TPM2P07951 284 aa20.65■□□□□ 0.9
PHF1-202ENST00000374516 MYL6BP14649 208 aa20.65■□□□□ 0.9
PHF1-202ENST00000374516 PDIA6Q15084 440 aa20.65■□□□□ 0.9
PHF1-202ENST00000374516 CABP4P57796 275 aa20.64■□□□□ 0.89
PHF1-202ENST00000374516 PPP1R42Q7Z4L9 355 aa20.64■□□□□ 0.89
PHF1-202ENST00000374516 ANP32BQ92688 251 aaKnown RBP20.64■□□□□ 0.89
PHF1-202ENST00000374516 HYPKQ9NX55 129 aa20.64■□□□□ 0.89
PHF1-202ENST00000374516 CWF19L2Q2TBE0 894 aaKnown RBP20.64■□□□□ 0.89
PHF1-202ENST00000374516 TSHZ3Q63HK5 1081 aa20.64■□□□□ 0.89
PHF1-202ENST00000374516 KSR2Q6VAB6 950 aa20.64■□□□□ 0.89
PHF1-202ENST00000374516 TTC5Q8N0Z6 440 aa20.64■□□□□ 0.89
PHF1-202ENST00000374516 VSIG10Q8N0Z9 540 aa20.64■□□□□ 0.89
PHF1-202ENST00000374516 LRRCC1Q9C099 1032 aa20.64■□□□□ 0.89
PHF1-202ENST00000374516 DDX21Q9NR30 783 aaKnown RBP eCLIP20.64■□□□□ 0.89
PHF1-202ENST00000374516 ABCC6O95255 1503 aa20.63■□□□□ 0.89
PHF1-202ENST00000374516 PIP4K2AP48426 406 aaPredicted RBP20.63■□□□□ 0.89
PHF1-202ENST00000374516 EVA1CP58658 441 aa20.63■□□□□ 0.89
PHF1-202ENST00000374516 LARP1Q6PKG0 1096 aaKnown RBP20.63■□□□□ 0.89
PHF1-202ENST00000374516 ZSCAN30Q86W11 494 aa20.63■□□□□ 0.89
PHF1-202ENST00000374516 SCN11AQ9UI33 1791 aa20.63■□□□□ 0.89
PHF1-202ENST00000374516 USP16Q9Y5T5 823 aa20.62■□□□□ 0.89
PHF1-202ENST00000374516 SDSP20132 328 aa20.62■□□□□ 0.89
PHF1-202ENST00000374516 ZCRB1Q8TBF4 217 aaKnown RBP20.62■□□□□ 0.89
PHF1-202ENST00000374516 COL5A2P05997 1499 aaPredicted RBP20.62■□□□□ 0.89
PHF1-202ENST00000374516 SRGAP3O43295 1099 aa20.61■□□□□ 0.89
PHF1-202ENST00000374516 RABEP1Q15276 862 aa20.61■□□□□ 0.89
PHF1-202ENST00000374516 DDX54Q8TDD1 881 aaKnown RBP20.61■□□□□ 0.89
PHF1-202ENST00000374516 SSH3Q8TE77 659 aa20.61■□□□□ 0.89
PHF1-202ENST00000374516 PDE1AP54750 535 aa20.6■□□□□ 0.89
PHF1-202ENST00000374516 ZNF445P59923 1031 aa20.6■□□□□ 0.89
PHF1-202ENST00000374516 NUCB2P80303 420 aa20.6■□□□□ 0.89
PHF1-202ENST00000374516 C9orf78Q9NZ63 289 aaPredicted RBP20.6■□□□□ 0.89
PHF1-202ENST00000374516 SURF6O75683 361 aaKnown RBP20.6■□□□□ 0.89
PHF1-202ENST00000374516 MCTP1Q6DN14 999 aa20.59■□□□□ 0.89
PHF1-202ENST00000374516 KIAA1211Q6ZU35 1233 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms