RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 PALD1Q9ULE6 856 aa13.18□□□□□ -0.3
CXCL12-203ENST00000374429 G3BP1Q13283 466 aaKnown RBP eCLIP13.17□□□□□ -0.3
CXCL12-203ENST00000374429 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
CXCL12-203ENST00000374429 ERC2O15083 957 aa13.17□□□□□ -0.3
CXCL12-203ENST00000374429 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
CXCL12-203ENST00000374429 CHGBP05060 677 aa13.17□□□□□ -0.3
CXCL12-203ENST00000374429 CEP170BQ9Y4F5 1589 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-203ENST00000374429 CDK12Q9NYV4 1490 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-203ENST00000374429 ST18O60284 1047 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 NEXNQ0ZGT2 675 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 STK3Q13188 491 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 REC8O95072 547 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 CLASRPQ8N2M8 674 aaKnown RBP13.16□□□□□ -0.3
CXCL12-203ENST00000374429 RHPN1Q8TCX5 695 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 GOLGA6L3A6NEY3 463 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 A1BGP04217 495 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 GPTP24298 496 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 RNF214Q8ND24 703 aa13.16□□□□□ -0.3
CXCL12-203ENST00000374429 DBF4Q9UBU7 674 aaPredicted RBP13.16□□□□□ -0.3
CXCL12-203ENST00000374429 ARHGEF25Q86VW2 580 aa13.15□□□□□ -0.3
CXCL12-203ENST00000374429 SPATA31D1Q6ZQQ2 1576 aa13.15□□□□□ -0.3
CXCL12-203ENST00000374429 SLFNL1Q499Z3 407 aa13.15□□□□□ -0.3
CXCL12-203ENST00000374429 IL25Q9H293 177 aa13.15□□□□□ -0.3
CXCL12-203ENST00000374429 ATP8B2P98198 1209 aa13.14□□□□□ -0.31
CXCL12-203ENST00000374429 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
CXCL12-203ENST00000374429 CAVIN1Q6NZI2 390 aaKnown RBP13.14□□□□□ -0.31
CXCL12-203ENST00000374429 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
CXCL12-203ENST00000374429 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
CXCL12-203ENST00000374429 FAM43AQ8N2R8 423 aa13.14□□□□□ -0.31
CXCL12-203ENST00000374429 BICC1Q9H694 974 aaKnown RBP13.14□□□□□ -0.31
CXCL12-203ENST00000374429 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
CXCL12-203ENST00000374429 SNRKQ9NRH2 765 aa13.13□□□□□ -0.31
CXCL12-203ENST00000374429 A0A087WZG4 1122 aa13.13□□□□□ -0.31
CXCL12-203ENST00000374429 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
CXCL12-203ENST00000374429 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
CXCL12-203ENST00000374429 RBM27Q9P2N5 1060 aaKnown RBP13.13□□□□□ -0.31
CXCL12-203ENST00000374429 OVOS2A0A0J9YW53 1432 aa13.13□□□□□ -0.31
CXCL12-203ENST00000374429 OVOS2Q6IE36 1432 aa13.13□□□□□ -0.31
CXCL12-203ENST00000374429 RIMS1Q86UR5 1692 aaKnown RBP13.13□□□□□ -0.31
CXCL12-203ENST00000374429 MCCP23508 829 aa13.13□□□□□ -0.31
CXCL12-203ENST00000374429 FSD1Q9BTV5 496 aa13.13□□□□□ -0.31
CXCL12-203ENST00000374429 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-203ENST00000374429 ZNF790Q6PG37 636 aa13.12□□□□□ -0.31
CXCL12-203ENST00000374429 CHMP4CQ96CF2 233 aa13.12□□□□□ -0.31
CXCL12-203ENST00000374429 TLR7Q9NYK1 1049 aaKnown RBP13.12□□□□□ -0.31
CXCL12-203ENST00000374429 KCNQ4P56696 695 aa13.12□□□□□ -0.31
CXCL12-203ENST00000374429 PRPF40BQ6NWY9 871 aaKnown RBP13.12□□□□□ -0.31
CXCL12-203ENST00000374429 SUCLG2Q96I99 432 aa13.12□□□□□ -0.31
CXCL12-203ENST00000374429 ZNF594Q96JF6 807 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-203ENST00000374429 KIF2CQ99661 725 aa13.12□□□□□ -0.31
CXCL12-203ENST00000374429 ANTXR1Q9H6X2 564 aa13.12□□□□□ -0.31
CXCL12-203ENST00000374429 ZNF335Q9H4Z2 1342 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-203ENST00000374429 RRP9O43818 475 aaKnown RBP13.12□□□□□ -0.31
CXCL12-203ENST00000374429 LRRC2Q9BYS8 371 aa13.12□□□□□ -0.31
CXCL12-203ENST00000374429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.12□□□□□ -0.31
CXCL12-203ENST00000374429 CRB1P82279 1406 aa13.11□□□□□ -0.31
CXCL12-203ENST00000374429 DDX58O95786 925 aaKnown RBP13.11□□□□□ -0.31
CXCL12-203ENST00000374429 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
CXCL12-203ENST00000374429 AGLP35573 1532 aa13.11□□□□□ -0.31
CXCL12-203ENST00000374429 TAF7LQ5H9L4 462 aa13.11□□□□□ -0.31
CXCL12-203ENST00000374429 FERMT3Q86UX7 667 aa13.11□□□□□ -0.31
CXCL12-203ENST00000374429 ACSBG1Q96GR2 724 aa13.11□□□□□ -0.31
CXCL12-203ENST00000374429 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
CXCL12-203ENST00000374429 ARHGEF10O15013 1369 aa13.1□□□□□ -0.31
CXCL12-203ENST00000374429 VPS37CA5D8V6 355 aaPredicted RBP13.1□□□□□ -0.31
CXCL12-203ENST00000374429 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
CXCL12-203ENST00000374429 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
CXCL12-203ENST00000374429 NECAB1Q8N987 351 aa13.1□□□□□ -0.31
CXCL12-203ENST00000374429 MED14O60244 1454 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 KIAA0232Q92628 1395 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 AMOTQ4VCS5 1084 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 DDX46Q7L014 1031 aaKnown RBP13.09□□□□□ -0.31
CXCL12-203ENST00000374429 RAB11FIP4Q86YS3 637 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 CASTP20810 708 aaKnown RBP13.09□□□□□ -0.31
CXCL12-203ENST00000374429 TIMM10P62072 90 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 BEND3Q5T5X7 828 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 LARP1Q6PKG0 1096 aaKnown RBP13.09□□□□□ -0.31
CXCL12-203ENST00000374429 TTLL7Q6ZT98 887 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 FAM227BQ96M60 508 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 CHMLP26374 656 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 SMIM5Q71RC9 77 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 IFNL2Q8IZJ0 200 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
CXCL12-203ENST00000374429 CYP27B1O15528 508 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 FKBP4Q02790 459 aaKnown RBP eCLIP13.08□□□□□ -0.32
CXCL12-203ENST00000374429 RABEP1Q15276 862 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 EPHA10Q5JZY3 1008 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 KIF1BPQ96EK5 621 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 NEURL4Q96JN8 1562 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 GRM8O00222 908 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 KSR2Q6VAB6 950 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 CCDC129Q6ZRS4 1044 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 SYNE4Q8N205 404 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 JAKMIP1Q96N16 626 aaKnown RBP13.08□□□□□ -0.32
CXCL12-203ENST00000374429 RBM25P49756 843 aaKnown RBP13.08□□□□□ -0.32
CXCL12-203ENST00000374429 LMBR1LQ6UX01 489 aa13.08□□□□□ -0.32
CXCL12-203ENST00000374429 CEBPZQ03701 1054 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms