RNA–Protein interactions for RNA: ENST00000374038.7

RBM39-204, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-204ENST00000374038 RC3H1Q5TC82 1133 aaKnown RBP20.36■□□□□ 0.85
RBM39-204ENST00000374038 SPINK5Q9NQ38 1064 aaPredicted RBP20.36■□□□□ 0.85
RBM39-204ENST00000374038 TFCP2L1Q9NZI6 479 aa20.36■□□□□ 0.85
RBM39-204ENST00000374038 FANCIQ9NVI1 1328 aa20.35■□□□□ 0.85
RBM39-204ENST00000374038 GOLGA2Q08379 1002 aa20.35■□□□□ 0.85
RBM39-204ENST00000374038 USP16Q9Y5T5 823 aa20.35■□□□□ 0.85
RBM39-204ENST00000374038 PSDA5PKW4 1024 aaPredicted RBP20.34■□□□□ 0.85
RBM39-204ENST00000374038 GNPATO15228 680 aa20.34■□□□□ 0.85
RBM39-204ENST00000374038 INTS5Q6P9B9 1019 aaKnown RBP20.34■□□□□ 0.85
RBM39-204ENST00000374038 CCDC87Q9NVE4 849 aa20.34■□□□□ 0.85
RBM39-204ENST00000374038 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
RBM39-204ENST00000374038 ZBTB1Q9Y2K1 713 aa20.33■□□□□ 0.85
RBM39-204ENST00000374038 AMIGO3Q86WK7 504 aa20.32■□□□□ 0.84
RBM39-204ENST00000374038 RTCBQ9Y3I0 505 aaKnown RBP20.32■□□□□ 0.84
RBM39-204ENST00000374038 PNPLA7Q6ZV29 1317 aa20.31■□□□□ 0.84
RBM39-204ENST00000374038 E9PSI1 815 aa20.31■□□□□ 0.84
RBM39-204ENST00000374038 RPS6KA4O75676 772 aa20.31■□□□□ 0.84
RBM39-204ENST00000374038 A1BGP04217 495 aa20.31■□□□□ 0.84
RBM39-204ENST00000374038 HOXB7P09629 217 aa20.31■□□□□ 0.84
RBM39-204ENST00000374038 DUSP27Q5VZP5 1158 aa20.31■□□□□ 0.84
RBM39-204ENST00000374038 CASZ1Q86V15 1759 aa20.31■□□□□ 0.84
RBM39-204ENST00000374038 PHF14O94880 888 aa20.3■□□□□ 0.84
RBM39-204ENST00000374038 SSFA2P28290 1259 aa20.3■□□□□ 0.84
RBM39-204ENST00000374038 SMIM5Q71RC9 77 aa20.3■□□□□ 0.84
RBM39-204ENST00000374038 C8orf58Q8NAV2 365 aa20.3■□□□□ 0.84
RBM39-204ENST00000374038 SOS1Q07889 1333 aaPredicted RBP20.29■□□□□ 0.84
RBM39-204ENST00000374038 ZBED9Q6R2W3 1325 aa20.29■□□□□ 0.84
RBM39-204ENST00000374038 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.29■□□□□ 0.84
RBM39-204ENST00000374038 CANXP27824 592 aaKnown RBP20.29■□□□□ 0.84
RBM39-204ENST00000374038 SLFN5Q08AF3 891 aa20.29■□□□□ 0.84
RBM39-204ENST00000374038 CDCA7LQ96GN5 454 aa20.29■□□□□ 0.84
RBM39-204ENST00000374038 ELL2O00472 640 aaPredicted RBP20.28■□□□□ 0.84
RBM39-204ENST00000374038 EIF2S2P20042 333 aaKnown RBP20.28■□□□□ 0.84
RBM39-204ENST00000374038 TSPYL6Q8N831 410 aa20.28■□□□□ 0.84
RBM39-204ENST00000374038 FLAD1Q8NFF5 587 aa20.28■□□□□ 0.84
RBM39-204ENST00000374038 C4AP0C0L4 1744 aa20.27■□□□□ 0.84
RBM39-204ENST00000374038 ADRA2BP18089 450 aa20.27■□□□□ 0.84
RBM39-204ENST00000374038 PIP4K2AP48426 406 aaPredicted RBP20.27■□□□□ 0.84
RBM39-204ENST00000374038 COL23A1Q86Y22 540 aaPredicted RBP20.27■□□□□ 0.84
RBM39-204ENST00000374038 PDGFDQ9GZP0 370 aaPredicted RBP20.27■□□□□ 0.84
RBM39-204ENST00000374038 ERBB4Q15303 1308 aa20.27■□□□□ 0.83
RBM39-204ENST00000374038 COL15A1P39059 1388 aa20.26■□□□□ 0.83
RBM39-204ENST00000374038 IL6STP40189 918 aaPredicted RBP20.26■□□□□ 0.83
RBM39-204ENST00000374038 EXOSC9Q06265 439 aaKnown RBP20.26■□□□□ 0.83
RBM39-204ENST00000374038 TRAPPC3LQ5T215 181 aa20.26■□□□□ 0.83
RBM39-204ENST00000374038 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
RBM39-204ENST00000374038 NECTIN2Q92692 538 aa20.26■□□□□ 0.83
RBM39-204ENST00000374038 NBPF26B4DH59 902 aa20.25■□□□□ 0.83
RBM39-204ENST00000374038 MSH5O43196 834 aa20.25■□□□□ 0.83
RBM39-204ENST00000374038 EIF5P55010 431 aaKnown RBP20.25■□□□□ 0.83
RBM39-204ENST00000374038 TWISTNBQ3B726 338 aaPredicted RBP20.25■□□□□ 0.83
RBM39-204ENST00000374038 NBPF10Q6P3W6 841 aaKnown RBP20.25■□□□□ 0.83
RBM39-204ENST00000374038 NBPF15Q8N660 670 aa20.25■□□□□ 0.83
RBM39-204ENST00000374038 TRMT2AQ8IZ69 625 aaKnown RBP20.24■□□□□ 0.83
RBM39-204ENST00000374038 ARHGEF1Q92888 912 aaKnown RBP20.24■□□□□ 0.83
RBM39-204ENST00000374038 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
RBM39-204ENST00000374038 RFC4P35249 363 aa20.22■□□□□ 0.83
RBM39-204ENST00000374038 NPM2Q86SE8 214 aaKnown RBP20.22■□□□□ 0.83
RBM39-204ENST00000374038 CHPF2Q9P2E5 772 aa20.22■□□□□ 0.83
RBM39-204ENST00000374038 MYL6BP14649 208 aa20.21■□□□□ 0.83
RBM39-204ENST00000374038 PDIA6Q15084 440 aa20.21■□□□□ 0.83
RBM39-204ENST00000374038 PROSER3Q2NL68 480 aa20.21■□□□□ 0.83
RBM39-204ENST00000374038 SLC16A10Q8TF71 515 aa20.21■□□□□ 0.83
RBM39-204ENST00000374038 CHMP4AQ9BY43 222 aa20.21■□□□□ 0.83
RBM39-204ENST00000374038 DDX21Q9NR30 783 aaKnown RBP eCLIP20.21■□□□□ 0.83
RBM39-204ENST00000374038 A0A087WZG4 1122 aa20.2■□□□□ 0.82
RBM39-204ENST00000374038 VAMP4O75379 141 aa20.2■□□□□ 0.82
RBM39-204ENST00000374038 ANXA1P04083 346 aa20.2■□□□□ 0.82
RBM39-204ENST00000374038 CCDC30Q5VVM6 783 aa20.2■□□□□ 0.82
RBM39-204ENST00000374038 DBF4Q9UBU7 674 aaPredicted RBP20.2■□□□□ 0.82
RBM39-204ENST00000374038 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
RBM39-204ENST00000374038 SCN7AQ01118 1682 aa20.19■□□□□ 0.82
RBM39-204ENST00000374038 ZBTB7AO95365 584 aa20.19■□□□□ 0.82
RBM39-204ENST00000374038 LRP10Q7Z4F1 713 aa20.19■□□□□ 0.82
RBM39-204ENST00000374038 SRP68Q9UHB9 627 aaKnown RBP20.19■□□□□ 0.82
RBM39-204ENST00000374038 BCORQ6W2J9 1755 aa20.18■□□□□ 0.82
RBM39-204ENST00000374038 DZIP3Q86Y13 1208 aaKnown RBP20.18■□□□□ 0.82
RBM39-204ENST00000374038 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
RBM39-204ENST00000374038 MTFR1LQ9H019 292 aa20.18■□□□□ 0.82
RBM39-204ENST00000374038 NARFQ9UHQ1 456 aa20.18■□□□□ 0.82
RBM39-204ENST00000374038 ZPR1O75312 459 aa20.17■□□□□ 0.82
RBM39-204ENST00000374038 ARXQ96QS3 562 aa20.17■□□□□ 0.82
RBM39-204ENST00000374038 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
RBM39-204ENST00000374038 GYS1P13807 737 aa20.16■□□□□ 0.82
RBM39-204ENST00000374038 USPL1Q5W0Q7 1092 aa20.16■□□□□ 0.82
RBM39-204ENST00000374038 MSL1Q68DK7 614 aa20.16■□□□□ 0.82
RBM39-204ENST00000374038 STK31Q9BXU1 1019 aa20.16■□□□□ 0.82
RBM39-204ENST00000374038 COL24A1Q17RW2 1714 aa20.16■□□□□ 0.82
RBM39-204ENST00000374038 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
RBM39-204ENST00000374038 CAMTA2O94983 1202 aa20.15■□□□□ 0.82
RBM39-204ENST00000374038 TTLL7Q6ZT98 887 aa20.15■□□□□ 0.82
RBM39-204ENST00000374038 HYPKQ9NX55 129 aa20.15■□□□□ 0.82
RBM39-204ENST00000374038 ATF5Q9Y2D1 282 aaPredicted RBP20.15■□□□□ 0.82
RBM39-204ENST00000374038 KIF6Q6ZMV9 814 aa20.14■□□□□ 0.81
RBM39-204ENST00000374038 XAGE3Q8WTP9 111 aa20.14■□□□□ 0.81
RBM39-204ENST00000374038 CACNA1FO60840 1977 aa20.14■□□□□ 0.81
RBM39-204ENST00000374038 CT47B1P0C2W7 299 aaPredicted RBP20.13■□□□□ 0.81
RBM39-204ENST00000374038 COPS6Q7L5N1 327 aa20.13■□□□□ 0.81
RBM39-204ENST00000374038 BCL2L12Q9HB09 334 aa20.13■□□□□ 0.81
RBM39-204ENST00000374038 SPON1Q9HCB6 807 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms