RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 PPP2R3AQ06190 1150 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 FILIP1LQ4L180 1135 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 GOLGA6L7A0A1B0GV03 622 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 ZNF710Q8N1W2 664 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 FSIP1Q8NA03 581 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 TCEANC2Q96MN5 208 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 CTNNA3Q9UI47 895 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 SYT1P21579 422 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 MAP9Q49MG5 647 aa17.91■□□□□ 0.46
SRPK1-204ENST00000373825 CLASRPQ8N2M8 674 aaKnown RBP17.91■□□□□ 0.46
SRPK1-204ENST00000373825 CPSF2Q9P2I0 782 aaKnown RBP17.91■□□□□ 0.46
SRPK1-204ENST00000373825 TRIM66O15016 1216 aa17.9■□□□□ 0.46
SRPK1-204ENST00000373825 GGT6Q6P531 493 aa17.9■□□□□ 0.46
SRPK1-204ENST00000373825 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
SRPK1-204ENST00000373825 RPRD2Q5VT52 1461 aaKnown RBP17.9■□□□□ 0.46
SRPK1-204ENST00000373825 ERLIN2O94905 339 aa17.9■□□□□ 0.46
SRPK1-204ENST00000373825 SEC31AO94979 1220 aaKnown RBP17.9■□□□□ 0.46
SRPK1-204ENST00000373825 LMOD1P29536 600 aaPredicted RBP17.9■□□□□ 0.46
SRPK1-204ENST00000373825 GYS2P54840 703 aa17.9■□□□□ 0.46
SRPK1-204ENST00000373825 KARSQ15046 597 aaKnown RBP17.9■□□□□ 0.46
SRPK1-204ENST00000373825 RAB11FIP3O75154 756 aa17.9■□□□□ 0.46
SRPK1-204ENST00000373825 CCDC181Q5TID7 509 aa17.9■□□□□ 0.46
SRPK1-204ENST00000373825 RAD54L2Q9Y4B4 1467 aa17.9■□□□□ 0.46
SRPK1-204ENST00000373825 ZEB2O60315 1214 aa17.89■□□□□ 0.46
SRPK1-204ENST00000373825 EZRP15311 586 aaKnown RBP17.89■□□□□ 0.46
SRPK1-204ENST00000373825 ZNF75DP51815 510 aa17.89■□□□□ 0.46
SRPK1-204ENST00000373825 CCDC150Q8NCX0 1101 aa17.89■□□□□ 0.46
SRPK1-204ENST00000373825 CBX8Q9HC52 389 aa17.89■□□□□ 0.46
SRPK1-204ENST00000373825 GOLGA1Q92805 767 aa17.89■□□□□ 0.45
SRPK1-204ENST00000373825 ZBTB12Q9Y330 459 aaPredicted RBP17.89■□□□□ 0.45
SRPK1-204ENST00000373825 TMEM132EQ6IEE7 984 aa17.89■□□□□ 0.45
SRPK1-204ENST00000373825 ATRIPQ8WXE1 791 aa17.89■□□□□ 0.45
SRPK1-204ENST00000373825 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
SRPK1-204ENST00000373825 DISP3Q9P2K9 1392 aa17.89■□□□□ 0.45
SRPK1-204ENST00000373825 MPHOSPH10O00566 681 aaKnown RBP17.88■□□□□ 0.45
SRPK1-204ENST00000373825 TAX1BP1Q86VP1 789 aa17.88■□□□□ 0.45
SRPK1-204ENST00000373825 UTP14AQ9BVJ6 771 aaKnown RBP17.88■□□□□ 0.45
SRPK1-204ENST00000373825 MINK1Q8N4C8 1332 aaPredicted RBP17.88■□□□□ 0.45
SRPK1-204ENST00000373825 CLNS1AP54105 237 aaKnown RBP17.88■□□□□ 0.45
SRPK1-204ENST00000373825 MICALCLQ6ZW33 695 aa17.88■□□□□ 0.45
SRPK1-204ENST00000373825 LTV1Q96GA3 475 aaPredicted RBP17.88■□□□□ 0.45
SRPK1-204ENST00000373825 KIF3BO15066 747 aa17.88■□□□□ 0.45
SRPK1-204ENST00000373825 PPARDQ03181 441 aa17.88■□□□□ 0.45
SRPK1-204ENST00000373825 CCAR1Q8IX12 1150 aaKnown RBP17.88■□□□□ 0.45
SRPK1-204ENST00000373825 PLEKHA4Q9H4M7 779 aa17.88■□□□□ 0.45
SRPK1-204ENST00000373825 ZCCHC17Q9NP64 241 aaKnown RBP17.88■□□□□ 0.45
SRPK1-204ENST00000373825 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
SRPK1-204ENST00000373825 TSPYL4Q9UJ04 414 aa17.87■□□□□ 0.45
SRPK1-204ENST00000373825 GNAI3P08754 354 aa17.87■□□□□ 0.45
SRPK1-204ENST00000373825 INPP5BP32019 993 aa17.87■□□□□ 0.45
SRPK1-204ENST00000373825 IFNKQ9P0W0 207 aa17.87■□□□□ 0.45
SRPK1-204ENST00000373825 PTPN23Q9H3S7 1636 aa17.87■□□□□ 0.45
SRPK1-204ENST00000373825 FRMD3A2A2Y4 597 aa17.87■□□□□ 0.45
SRPK1-204ENST00000373825 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
SRPK1-204ENST00000373825 PEX19P40855 299 aa17.87■□□□□ 0.45
SRPK1-204ENST00000373825 ZBTB40Q9NUA8 1239 aa17.87■□□□□ 0.45
SRPK1-204ENST00000373825 ESF1Q9H501 851 aaKnown RBP17.86■□□□□ 0.45
SRPK1-204ENST00000373825 IBTKQ9P2D0 1353 aaPredicted RBP17.86■□□□□ 0.45
SRPK1-204ENST00000373825 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
SRPK1-204ENST00000373825 OTUD7AQ8TE49 926 aaPredicted RBP17.86■□□□□ 0.45
SRPK1-204ENST00000373825 EVC2Q86UK5 1308 aa17.86■□□□□ 0.45
SRPK1-204ENST00000373825 KANK1Q14678 1352 aa17.86■□□□□ 0.45
SRPK1-204ENST00000373825 KLHL10Q6JEL2 608 aa17.86■□□□□ 0.45
SRPK1-204ENST00000373825 CCDC148Q8NFR7 591 aa17.86■□□□□ 0.45
SRPK1-204ENST00000373825 FAM212AQ96EL1 285 aa17.86■□□□□ 0.45
SRPK1-204ENST00000373825 A0A1B0GUA9 196 aa17.86■□□□□ 0.45
SRPK1-204ENST00000373825 GOLGA5Q8TBA6 731 aa17.86■□□□□ 0.45
SRPK1-204ENST00000373825 MATR3P43243 847 aaKnown RBP eCLIP17.85■□□□□ 0.451e-6■■■□□ 15.3
SRPK1-204ENST00000373825 G3BP1Q13283 466 aaKnown RBP eCLIP17.85■□□□□ 0.458e-7■□□□□ 8.3
SRPK1-204ENST00000373825 LZTFL1Q9NQ48 299 aa17.85■□□□□ 0.45
SRPK1-204ENST00000373825 ANKRD1Q15327 319 aa17.85■□□□□ 0.45
SRPK1-204ENST00000373825 BCCIPQ9P287 314 aaKnown RBP eCLIP17.85■□□□□ 0.45
SRPK1-204ENST00000373825 A0A0G2JS52 829 aa17.85■□□□□ 0.45
SRPK1-204ENST00000373825 POTEB2H3BUK9 544 aa17.85■□□□□ 0.45
SRPK1-204ENST00000373825 UBASH3AP57075 661 aa17.85■□□□□ 0.45
SRPK1-204ENST00000373825 FEZ2Q9UHY8 353 aaPredicted RBP17.85■□□□□ 0.45
SRPK1-204ENST00000373825 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.85■□□□□ 0.455e-9■■□□□ 11.4
SRPK1-204ENST00000373825 PEG3Q9GZU2 1588 aa17.85■□□□□ 0.45
SRPK1-204ENST00000373825 CTAGE5O15320 804 aa17.84■□□□□ 0.45
SRPK1-204ENST00000373825 DNA2P51530 1060 aa17.84■□□□□ 0.45
SRPK1-204ENST00000373825 PLEKHM2Q8IWE5 1019 aa17.84■□□□□ 0.45
SRPK1-204ENST00000373825 CPA1P15085 419 aa17.84■□□□□ 0.45
SRPK1-204ENST00000373825 KMT5BQ4FZB7 885 aa17.84■□□□□ 0.45
SRPK1-204ENST00000373825 HDXQ7Z353 690 aa17.84■□□□□ 0.45
SRPK1-204ENST00000373825 CCDC172P0C7W6 258 aa17.84■□□□□ 0.45
SRPK1-204ENST00000373825 CAVIN2O95810 425 aa17.84■□□□□ 0.45
SRPK1-204ENST00000373825 DHX16O60231 1041 aaKnown RBP17.83■□□□□ 0.45
SRPK1-204ENST00000373825 BRD1O95696 1058 aa17.83■□□□□ 0.45
SRPK1-204ENST00000373825 SLC3A2P08195 630 aaKnown RBP17.83■□□□□ 0.45
SRPK1-204ENST00000373825 SH2B1Q9NRF2 756 aaPredicted RBP17.83■□□□□ 0.45
SRPK1-204ENST00000373825 CTAGE15A4D2H0 777 aa17.83■□□□□ 0.44
SRPK1-204ENST00000373825 CTAGE8P0CG41 777 aa17.83■□□□□ 0.44
SRPK1-204ENST00000373825 CTAGE6Q86UF2 777 aa17.83■□□□□ 0.44
SRPK1-204ENST00000373825 CTAGE4Q8IX94 777 aa17.83■□□□□ 0.44
SRPK1-204ENST00000373825 RBM33Q96EV2 1170 aaKnown RBP17.83■□□□□ 0.44
SRPK1-204ENST00000373825 CCDC114Q96M63 670 aa17.83■□□□□ 0.44
SRPK1-204ENST00000373825 LMOD2Q6P5Q4 547 aa17.82■□□□□ 0.44
SRPK1-204ENST00000373825 MYO6Q9UM54 1294 aa17.82■□□□□ 0.44
SRPK1-204ENST00000373825 GCKP35557 465 aa17.82■□□□□ 0.44
SRPK1-204ENST00000373825 GDAP1L1Q96MZ0 367 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms