RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 TRAPPC3LQ5T215 181 aa10.42□□□□□ -0.74
SP140-202ENST00000373645 COL13A1Q5TAT6 717 aaPredicted RBP10.42□□□□□ -0.74
SP140-202ENST00000373645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.74
SP140-202ENST00000373645 ARFGEF1Q9Y6D6 1849 aa10.42□□□□□ -0.74
SP140-202ENST00000373645 NPC1L1Q9UHC9 1359 aa10.41□□□□□ -0.74
SP140-202ENST00000373645 ZNF831Q5JPB2 1677 aa10.41□□□□□ -0.74
SP140-202ENST00000373645 CNTNAP4Q9C0A0 1308 aa10.41□□□□□ -0.74
SP140-202ENST00000373645 HMGB2P26583 209 aaKnown RBP10.41□□□□□ -0.74
SP140-202ENST00000373645 CHRNA5P30532 468 aa10.41□□□□□ -0.74
SP140-202ENST00000373645 NLGN1Q8N2Q7 840 aa10.41□□□□□ -0.74
SP140-202ENST00000373645 CCDC87Q9NVE4 849 aa10.41□□□□□ -0.74
SP140-202ENST00000373645 TJP1Q07157 1748 aa10.41□□□□□ -0.74
SP140-202ENST00000373645 ADAMTS7Q9UKP4 1686 aa10.41□□□□□ -0.74
SP140-202ENST00000373645 PTCD1O75127 700 aaKnown RBP10.4□□□□□ -0.74
SP140-202ENST00000373645 RPS6KA4O75676 772 aa10.4□□□□□ -0.74
SP140-202ENST00000373645 RFC4P35249 363 aa10.4□□□□□ -0.74
SP140-202ENST00000373645 FKBP8Q14318 412 aa10.4□□□□□ -0.74
SP140-202ENST00000373645 CC2D1BQ5T0F9 858 aaKnown RBP10.4□□□□□ -0.74
SP140-202ENST00000373645 AEBP1Q8IUX7 1158 aa10.4□□□□□ -0.74
SP140-202ENST00000373645 PRKRIP1Q9H875 184 aaPredicted RBP10.4□□□□□ -0.74
SP140-202ENST00000373645 POTEIP0CG38 1075 aa10.39□□□□□ -0.75
SP140-202ENST00000373645 CRKLP46109 303 aaKnown RBP10.39□□□□□ -0.75
SP140-202ENST00000373645 RASSF7Q02833 373 aa10.39□□□□□ -0.75
SP140-202ENST00000373645 CNGB1Q14028 1251 aaPredicted RBP10.39□□□□□ -0.75
SP140-202ENST00000373645 RALBP1Q15311 655 aa10.39□□□□□ -0.75
SP140-202ENST00000373645 RC3H1Q5TC82 1133 aaKnown RBP10.39□□□□□ -0.75
SP140-202ENST00000373645 ZNF530Q6P9A1 599 aaPredicted RBP10.39□□□□□ -0.75
SP140-202ENST00000373645 MIER1Q8N108 512 aa10.39□□□□□ -0.75
SP140-202ENST00000373645 RBM46Q8TBY0 533 aaKnown RBP10.39□□□□□ -0.75
SP140-202ENST00000373645 KLRG1Q96E93 195 aa10.39□□□□□ -0.75
SP140-202ENST00000373645 DCAF5Q96JK2 942 aa10.39□□□□□ -0.75
SP140-202ENST00000373645 RNF181Q9P0P0 153 aa10.39□□□□□ -0.75
SP140-202ENST00000373645 PARP3Q9Y6F1 533 aa10.39□□□□□ -0.75
SP140-202ENST00000373645 SBF1O95248 1867 aa10.38□□□□□ -0.75
SP140-202ENST00000373645 USP42Q9H9J4 1324 aaKnown RBP10.38□□□□□ -0.75
SP140-202ENST00000373645 ERVV-2B6SEH9 535 aa10.38□□□□□ -0.75
SP140-202ENST00000373645 PRELPP51888 382 aa10.38□□□□□ -0.75
SP140-202ENST00000373645 MORC1Q86VD1 984 aa10.38□□□□□ -0.75
SP140-202ENST00000373645 SSUH2Q9Y2M2 353 aa10.38□□□□□ -0.75
SP140-202ENST00000373645 PLEKHG2Q9H7P9 1386 aa10.38□□□□□ -0.75
SP140-202ENST00000373645 PCNTO95613 3336 aa10.37□□□□□ -0.75
SP140-202ENST00000373645 CABP4P57796 275 aa10.37□□□□□ -0.75
SP140-202ENST00000373645 JMYQ8N9B5 988 aa10.37□□□□□ -0.75
SP140-202ENST00000373645 RRAGCQ9HB90 399 aa10.37□□□□□ -0.75
SP140-202ENST00000373645 PIM2Q9P1W9 311 aa10.37□□□□□ -0.75
SP140-202ENST00000373645 TNRC6CQ9HCJ0 1690 aaKnown RBP10.37□□□□□ -0.75
SP140-202ENST00000373645 POLRMTO00411 1230 aaKnown RBP10.36□□□□□ -0.75
SP140-202ENST00000373645 PRR29P0C7W0 189 aa10.36□□□□□ -0.75
SP140-202ENST00000373645 CD44P16070 742 aaKnown RBP10.36□□□□□ -0.75
SP140-202ENST00000373645 DALRD3Q5D0E6 543 aaKnown RBP10.36□□□□□ -0.75
SP140-202ENST00000373645 INTS5Q6P9B9 1019 aaKnown RBP10.36□□□□□ -0.75
SP140-202ENST00000373645 ATXN8OSP0DMR3 200 aa10.35□□□□□ -0.75
SP140-202ENST00000373645 C16orf71Q8IYS4 520 aaPredicted RBP10.35□□□□□ -0.75
SP140-202ENST00000373645 NFATC2IPQ8NCF5 419 aa10.35□□□□□ -0.75
SP140-202ENST00000373645 CARMIL3Q8ND23 1372 aa10.35□□□□□ -0.75
SP140-202ENST00000373645 AFDNP55196 1824 aaKnown RBP10.35□□□□□ -0.75
SP140-202ENST00000373645 MTHFSP49914 203 aa10.34□□□□□ -0.75
SP140-202ENST00000373645 FSTL1Q12841 308 aa10.34□□□□□ -0.75
SP140-202ENST00000373645 PLEKHO1Q53GL0 409 aaPredicted RBP10.34□□□□□ -0.75
SP140-202ENST00000373645 DNAJC10Q8IXB1 793 aa10.34□□□□□ -0.75
SP140-202ENST00000373645 KDM2BQ8NHM5 1336 aa10.33□□□□□ -0.76
SP140-202ENST00000373645 MYBBP1AQ9BQG0 1328 aaKnown RBP10.33□□□□□ -0.76
SP140-202ENST00000373645 TIAM2Q8IVF5 1701 aa10.33□□□□□ -0.76
SP140-202ENST00000373645 CCER2I3L3R5 266 aa10.33□□□□□ -0.76
SP140-202ENST00000373645 HSP90AB1P08238 724 aaKnown RBP10.33□□□□□ -0.76
SP140-202ENST00000373645 TM4SF1P30408 202 aa10.33□□□□□ -0.76
SP140-202ENST00000373645 NFIXQ14938 502 aa10.33□□□□□ -0.76
SP140-202ENST00000373645 USPL1Q5W0Q7 1092 aa10.33□□□□□ -0.76
SP140-202ENST00000373645 TNS4Q8IZW8 715 aa10.33□□□□□ -0.76
SP140-202ENST00000373645 SCN11AQ9UI33 1791 aa10.33□□□□□ -0.76
SP140-202ENST00000373645 SOS1Q07889 1333 aaPredicted RBP10.33□□□□□ -0.76
SP140-202ENST00000373645 PPP2R1AP30153 589 aa10.32□□□□□ -0.76
SP140-202ENST00000373645 CLCN6P51797 869 aa10.32□□□□□ -0.76
SP140-202ENST00000373645 SLC39A6Q13433 755 aa10.32□□□□□ -0.76
SP140-202ENST00000373645 DCBLD2Q96PD2 775 aa10.32□□□□□ -0.76
SP140-202ENST00000373645 BCL2L12Q9HB09 334 aa10.32□□□□□ -0.76
SP140-202ENST00000373645 NRXN2Q9P2S2 1712 aa10.32□□□□□ -0.76
SP140-202ENST00000373645 DLEC1Q9Y238 1755 aa10.31□□□□□ -0.76
SP140-202ENST00000373645 MRC1P22897 1456 aa10.31□□□□□ -0.76
SP140-202ENST00000373645 COL15A1P39059 1388 aa10.31□□□□□ -0.76
SP140-202ENST00000373645 HSPA1AP0DMV8 641 aaKnown RBP10.31□□□□□ -0.76
SP140-202ENST00000373645 HSPA1BP0DMV9 641 aaKnown RBP10.31□□□□□ -0.76
SP140-202ENST00000373645 C1orf141Q5JVX7 400 aa10.31□□□□□ -0.76
SP140-202ENST00000373645 SULT6B1Q6IMI4 303 aa10.31□□□□□ -0.76
SP140-202ENST00000373645 SMC1BQ8NDV3 1235 aa10.31□□□□□ -0.76
SP140-202ENST00000373645 LGR6Q9HBX8 967 aa10.31□□□□□ -0.76
SP140-202ENST00000373645 ZBTB1Q9Y2K1 713 aa10.31□□□□□ -0.76
SP140-202ENST00000373645 CCDC88AQ3V6T2 1871 aa10.3□□□□□ -0.76
SP140-202ENST00000373645 NFKBIEO00221 500 aa10.3□□□□□ -0.76
SP140-202ENST00000373645 AMOTQ4VCS5 1084 aa10.3□□□□□ -0.76
SP140-202ENST00000373645 COL11A2P13942 1736 aaPredicted RBP10.3□□□□□ -0.76
SP140-202ENST00000373645 POTECB2RU33 542 aa10.29□□□□□ -0.76
SP140-202ENST00000373645 ZPR1O75312 459 aa10.29□□□□□ -0.76
SP140-202ENST00000373645 CYP19A1P11511 503 aaPredicted RBP10.29□□□□□ -0.76
SP140-202ENST00000373645 LMNB1P20700 586 aa10.29□□□□□ -0.76
SP140-202ENST00000373645 CCDC24Q8N4L8 307 aa10.29□□□□□ -0.76
SP140-202ENST00000373645 SLC52A2Q9HAB3 445 aa10.29□□□□□ -0.76
SP140-202ENST00000373645 ANKRD31Q8N7Z5 1873 aa10.29□□□□□ -0.76
SP140-202ENST00000373645 VIRMAQ69YN4 1812 aaKnown RBP10.28□□□□□ -0.76
SP140-202ENST00000373645 GLTPD2A6NH11 291 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms