RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 INTS5Q6P9B9 1019 aaKnown RBP23.98■■□□□ 1.43
PBX3-205ENST00000373492 TEX13AQ9BXU3 409 aaPredicted RBP23.98■■□□□ 1.43
PBX3-205ENST00000373492 LAMB4A4D0S4 1761 aa23.98■■□□□ 1.43
PBX3-205ENST00000373492 CALD1Q05682 793 aaKnown RBP23.97■■□□□ 1.43
PBX3-205ENST00000373492 NCBP3Q53F19 620 aaKnown RBP23.97■■□□□ 1.43
PBX3-205ENST00000373492 CCDC87Q9NVE4 849 aa23.97■■□□□ 1.43
PBX3-205ENST00000373492 HEG1Q9ULI3 1381 aa23.97■■□□□ 1.43
PBX3-205ENST00000373492 STARD3NLO95772 234 aa23.96■■□□□ 1.43
PBX3-205ENST00000373492 CCDC27Q2M243 656 aa23.96■■□□□ 1.43
PBX3-205ENST00000373492 NGEFQ8N5V2 710 aa23.96■■□□□ 1.43
PBX3-205ENST00000373492 ARHGEF1Q92888 912 aaKnown RBP23.96■■□□□ 1.43
PBX3-205ENST00000373492 SENP3-EIF4A1A0A087X0R7 540 aa23.95■■□□□ 1.42
PBX3-205ENST00000373492 KCNQ3O43525 872 aa23.95■■□□□ 1.42
PBX3-205ENST00000373492 MSL1Q68DK7 614 aa23.95■■□□□ 1.42
PBX3-205ENST00000373492 BABAM1Q9NWV8 329 aa23.95■■□□□ 1.42
PBX3-205ENST00000373492 RFC4P35249 363 aa23.94■■□□□ 1.42
PBX3-205ENST00000373492 FHDC1Q9C0D6 1143 aaPredicted RBP23.94■■□□□ 1.42
PBX3-205ENST00000373492 MIS18AQ9NYP9 233 aa23.94■■□□□ 1.42
PBX3-205ENST00000373492 TSPYL4Q9UJ04 414 aa23.94■■□□□ 1.42
PBX3-205ENST00000373492 LAS1LQ9Y4W2 734 aaKnown RBP23.93■■□□□ 1.42
PBX3-205ENST00000373492 SYT17Q9BSW7 474 aa23.92■■□□□ 1.42
PBX3-205ENST00000373492 SALL2Q9Y467 1007 aaPredicted RBP23.92■■□□□ 1.42
PBX3-205ENST00000373492 SOS1Q07889 1333 aaPredicted RBP23.91■■□□□ 1.42
PBX3-205ENST00000373492 WWC1Q8IX03 1113 aa23.91■■□□□ 1.42
PBX3-205ENST00000373492 SNRPA1P09661 255 aaKnown RBP23.9■■□□□ 1.42
PBX3-205ENST00000373492 NLGN1Q8N2Q7 840 aa23.9■■□□□ 1.42
PBX3-205ENST00000373492 ZBTB1Q9Y2K1 713 aa23.9■■□□□ 1.42
PBX3-205ENST00000373492 GNAI1P63096 354 aa23.89■■□□□ 1.41
PBX3-205ENST00000373492 CFAP44Q96MT7 982 aa23.89■■□□□ 1.41
PBX3-205ENST00000373492 GYS1P13807 737 aa23.88■■□□□ 1.41
PBX3-205ENST00000373492 CHL1O00533 1208 aa23.87■■□□□ 1.41
PBX3-205ENST00000373492 IFT57Q9NWB7 429 aa23.87■■□□□ 1.41
PBX3-205ENST00000373492 C4AP0C0L4 1744 aa23.87■■□□□ 1.41
PBX3-205ENST00000373492 USP42Q9H9J4 1324 aaKnown RBP23.86■■□□□ 1.41
PBX3-205ENST00000373492 CANXP27824 592 aaKnown RBP23.86■■□□□ 1.41
PBX3-205ENST00000373492 EIF4A1P60842 406 aaKnown RBP23.86■■□□□ 1.41
PBX3-205ENST00000373492 ZPR1O75312 459 aa23.85■■□□□ 1.41
PBX3-205ENST00000373492 EIF5P55010 431 aaKnown RBP23.85■■□□□ 1.41
PBX3-205ENST00000373492 WDR63Q8IWG1 891 aa23.85■■□□□ 1.41
PBX3-205ENST00000373492 USP16Q9Y5T5 823 aa23.85■■□□□ 1.41
PBX3-205ENST00000373492 COL15A1P39059 1388 aa23.85■■□□□ 1.41
PBX3-205ENST00000373492 IL16Q14005 1332 aa23.84■■□□□ 1.41
PBX3-205ENST00000373492 A0A087WZG4 1122 aa23.84■■□□□ 1.41
PBX3-205ENST00000373492 ZNF853P0CG23 659 aa23.84■■□□□ 1.41
PBX3-205ENST00000373492 DCAF8L1A6NGE4 600 aa23.83■■□□□ 1.41
PBX3-205ENST00000373492 A1BGP04217 495 aa23.83■■□□□ 1.41
PBX3-205ENST00000373492 MMP10P09238 476 aa23.83■■□□□ 1.41
PBX3-205ENST00000373492 IL6STP40189 918 aaPredicted RBP23.83■■□□□ 1.41
PBX3-205ENST00000373492 KLHL34Q8N239 644 aa23.83■■□□□ 1.41
PBX3-205ENST00000373492 MBIPQ9NS73 344 aa23.83■■□□□ 1.41
PBX3-205ENST00000373492 SRP68Q9UHB9 627 aaKnown RBP23.83■■□□□ 1.41
PBX3-205ENST00000373492 NARFQ9UHQ1 456 aa23.83■■□□□ 1.41
PBX3-205ENST00000373492 CD2APQ9Y5K6 639 aa23.83■■□□□ 1.41
PBX3-205ENST00000373492 PRAMEF22A3QJZ6 481 aa23.82■■□□□ 1.4
PBX3-205ENST00000373492 CACNA1FO60840 1977 aa23.82■■□□□ 1.4
PBX3-205ENST00000373492 GIGYF1O75420 1035 aaPredicted RBP23.81■■□□□ 1.4
PBX3-205ENST00000373492 USPL1Q5W0Q7 1092 aa23.81■■□□□ 1.4
PBX3-205ENST00000373492 FKBP8Q14318 412 aa23.8■■□□□ 1.4
PBX3-205ENST00000373492 NPM2Q86SE8 214 aaKnown RBP23.8■■□□□ 1.4
PBX3-205ENST00000373492 PARP3Q9Y6F1 533 aa23.79■■□□□ 1.4
PBX3-205ENST00000373492 NLGN2Q8NFZ4 835 aa23.77■■□□□ 1.4
PBX3-205ENST00000373492 TM4SF1P30408 202 aa23.76■■□□□ 1.39
PBX3-205ENST00000373492 ZNF330Q9Y3S2 320 aaPredicted RBP23.76■■□□□ 1.39
PBX3-205ENST00000373492 ZNF521Q96K83 1311 aa23.76■■□□□ 1.39
PBX3-205ENST00000373492 TSR2Q969E8 191 aaKnown RBP23.75■■□□□ 1.39
PBX3-205ENST00000373492 BCL2L12Q9HB09 334 aa23.75■■□□□ 1.39
PBX3-205ENST00000373492 BCORQ6W2J9 1755 aa23.74■■□□□ 1.39
PBX3-205ENST00000373492 HOXB7P09629 217 aa23.74■■□□□ 1.39
PBX3-205ENST00000373492 GOLGA2Q08379 1002 aa23.74■■□□□ 1.39
PBX3-205ENST00000373492 MYH16Q9H6N6 1097 aa23.74■■□□□ 1.39
PBX3-205ENST00000373492 NBPF26B4DH59 902 aa23.73■■□□□ 1.39
PBX3-205ENST00000373492 HNRNPUQ00839 825 aaKnown RBP eCLIP23.73■■□□□ 1.39
PBX3-205ENST00000373492 KRT24Q2M2I5 525 aa23.73■■□□□ 1.39
PBX3-205ENST00000373492 NBPF10Q6P3W6 841 aaKnown RBP23.73■■□□□ 1.39
PBX3-205ENST00000373492 NBPF15Q8N660 670 aa23.73■■□□□ 1.39
PBX3-205ENST00000373492 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
PBX3-205ENST00000373492 POLRMTO00411 1230 aaKnown RBP23.72■■□□□ 1.39
PBX3-205ENST00000373492 EIF2S2P20042 333 aaKnown RBP23.72■■□□□ 1.39
PBX3-205ENST00000373492 PIP4K2AP48426 406 aaPredicted RBP23.72■■□□□ 1.39
PBX3-205ENST00000373492 DDR1Q08345 913 aa23.72■■□□□ 1.39
PBX3-205ENST00000373492 DZIP3Q86Y13 1208 aaKnown RBP23.72■■□□□ 1.39
PBX3-205ENST00000373492 NUP98P52948 1817 aa23.71■■□□□ 1.39
PBX3-205ENST00000373492 SCN7AQ01118 1682 aa23.71■■□□□ 1.39
PBX3-205ENST00000373492 ERBB4Q15303 1308 aa23.71■■□□□ 1.39
PBX3-205ENST00000373492 FANCIQ9NVI1 1328 aa23.71■■□□□ 1.39
PBX3-205ENST00000373492 NFIXQ14938 502 aa23.71■■□□□ 1.39
PBX3-205ENST00000373492 DUSP27Q5VZP5 1158 aa23.71■■□□□ 1.39
PBX3-205ENST00000373492 CAMTA2O94983 1202 aa23.7■■□□□ 1.38
PBX3-205ENST00000373492 CHMP4AQ9BY43 222 aa23.7■■□□□ 1.38
PBX3-205ENST00000373492 C10orf71Q711Q0 1435 aa23.69■■□□□ 1.38
PBX3-205ENST00000373492 RGL2O15211 777 aa23.69■■□□□ 1.38
PBX3-205ENST00000373492 TGFB2P61812 414 aa23.69■■□□□ 1.38
PBX3-205ENST00000373492 GPR162Q16538 588 aa23.69■■□□□ 1.38
PBX3-205ENST00000373492 E9PSI1 815 aa23.68■■□□□ 1.38
PBX3-205ENST00000373492 ELL2O00472 640 aaPredicted RBP23.68■■□□□ 1.38
PBX3-205ENST00000373492 CLEC4GQ6UXB4 293 aa23.68■■□□□ 1.38
PBX3-205ENST00000373492 SPINK5Q9NQ38 1064 aaPredicted RBP23.68■■□□□ 1.38
PBX3-205ENST00000373492 UTRNP46939 3433 aa23.68■■□□□ 1.38
PBX3-205ENST00000373492 HDGFL1Q5TGJ6 251 aa23.67■■□□□ 1.38
PBX3-205ENST00000373492 C8orf58Q8NAV2 365 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms