RNA–Protein interactions for RNA: ENST00000372833.5

CHCHD1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD1, Length 835 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1-201ENST00000372833 KIF3CO14782 793 aa23.8■■□□□ 1.4
CHCHD1-201ENST00000372833 C9orf131Q5VYM1 1079 aa23.8■■□□□ 1.4
CHCHD1-201ENST00000372833 VSIG10Q8N0Z9 540 aa23.8■■□□□ 1.4
CHCHD1-201ENST00000372833 NARFQ9UHQ1 456 aa23.8■■□□□ 1.4
CHCHD1-201ENST00000372833 NPC1L1Q9UHC9 1359 aa23.79■■□□□ 1.4
CHCHD1-201ENST00000372833 GNAT3A8MTJ3 354 aa23.79■■□□□ 1.4
CHCHD1-201ENST00000372833 STARD3NLO95772 234 aa23.79■■□□□ 1.4
CHCHD1-201ENST00000372833 TM4SF1P30408 202 aa23.79■■□□□ 1.4
CHCHD1-201ENST00000372833 CFAP53Q96M91 514 aa23.79■■□□□ 1.4
CHCHD1-201ENST00000372833 ZNF330Q9Y3S2 320 aaPredicted RBP23.78■■□□□ 1.4
CHCHD1-201ENST00000372833 BRCA1P38398 1863 aaKnown RBP23.78■■□□□ 1.4
CHCHD1-201ENST00000372833 NFIXQ14938 502 aa23.77■■□□□ 1.4
CHCHD1-201ENST00000372833 ADAMTS7Q9UKP4 1686 aa23.76■■□□□ 1.39
CHCHD1-201ENST00000372833 COL3A1P02461 1466 aaPredicted RBP23.76■■□□□ 1.39
CHCHD1-201ENST00000372833 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
CHCHD1-201ENST00000372833 RNF181Q9P0P0 153 aa23.76■■□□□ 1.39
CHCHD1-201ENST00000372833 ARFGEF1Q9Y6D6 1849 aa23.75■■□□□ 1.39
CHCHD1-201ENST00000372833 BICDL1Q6ZP65 573 aa23.75■■□□□ 1.39
CHCHD1-201ENST00000372833 C16orf71Q8IYS4 520 aaPredicted RBP23.75■■□□□ 1.39
CHCHD1-201ENST00000372833 NMRK2Q9NPI5 230 aa23.75■■□□□ 1.39
CHCHD1-201ENST00000372833 A0A087WZG4 1122 aa23.74■■□□□ 1.39
CHCHD1-201ENST00000372833 TOMM70O94826 608 aa23.74■■□□□ 1.39
CHCHD1-201ENST00000372833 SERPINB2P05120 415 aa23.74■■□□□ 1.39
CHCHD1-201ENST00000372833 ZNF790Q6PG37 636 aa23.74■■□□□ 1.39
CHCHD1-201ENST00000372833 ZNF496Q96IT1 587 aaPredicted RBP23.74■■□□□ 1.39
CHCHD1-201ENST00000372833 IL17REQ8NFR9 667 aa23.73■■□□□ 1.39
CHCHD1-201ENST00000372833 TEX13AQ9BXU3 409 aaPredicted RBP23.73■■□□□ 1.39
CHCHD1-201ENST00000372833 PRKAR2BP31323 418 aa23.72■■□□□ 1.39
CHCHD1-201ENST00000372833 NUDCQ9Y266 331 aa23.72■■□□□ 1.39
CHCHD1-201ENST00000372833 UBR2Q8IWV8 1755 aa23.71■■□□□ 1.39
CHCHD1-201ENST00000372833 HEG1Q9ULI3 1381 aa23.71■■□□□ 1.39
CHCHD1-201ENST00000372833 KDM2BQ8NHM5 1336 aa23.71■■□□□ 1.39
CHCHD1-201ENST00000372833 BCL2L12Q9HB09 334 aa23.71■■□□□ 1.39
CHCHD1-201ENST00000372833 FMNL2Q96PY5 1086 aa23.7■■□□□ 1.38
CHCHD1-201ENST00000372833 NPHP1O15259 732 aa23.69■■□□□ 1.38
CHCHD1-201ENST00000372833 EIF5P55010 431 aaKnown RBP23.69■■□□□ 1.38
CHCHD1-201ENST00000372833 C2CD5Q86YS7 1000 aa23.69■■□□□ 1.38
CHCHD1-201ENST00000372833 CEP350Q5VT06 3117 aa23.68■■□□□ 1.38
CHCHD1-201ENST00000372833 BTBD11A6QL63 1104 aa23.68■■□□□ 1.38
CHCHD1-201ENST00000372833 H0YIN7 160 aa23.68■■□□□ 1.38
CHCHD1-201ENST00000372833 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
CHCHD1-201ENST00000372833 APLP1P51693 650 aa23.68■■□□□ 1.38
CHCHD1-201ENST00000372833 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
CHCHD1-201ENST00000372833 AFDNP55196 1824 aaKnown RBP23.68■■□□□ 1.38
CHCHD1-201ENST00000372833 RASSF7Q02833 373 aa23.67■■□□□ 1.38
CHCHD1-201ENST00000372833 TTLL6Q8N841 843 aa23.67■■□□□ 1.38
CHCHD1-201ENST00000372833 RTF1Q92541 710 aaKnown RBP23.67■■□□□ 1.38
CHCHD1-201ENST00000372833 PHACTR3Q96KR7 559 aa23.67■■□□□ 1.38
CHCHD1-201ENST00000372833 TBC1D2BQ9UPU7 963 aa23.67■■□□□ 1.38
CHCHD1-201ENST00000372833 RSPH6AQ9H0K4 717 aa23.66■■□□□ 1.38
CHCHD1-201ENST00000372833 IL6STP40189 918 aaPredicted RBP23.65■■□□□ 1.38
CHCHD1-201ENST00000372833 TBC1D9BQ66K14 1250 aa23.65■■□□□ 1.38
CHCHD1-201ENST00000372833 NRXN2Q9P2S2 1712 aa23.64■■□□□ 1.38
CHCHD1-201ENST00000372833 ZNF622Q969S3 477 aaKnown RBP eCLIP23.64■■□□□ 1.37
CHCHD1-201ENST00000372833 CARMIL3Q8ND23 1372 aa23.64■■□□□ 1.37
CHCHD1-201ENST00000372833 A1BGP04217 495 aa23.63■■□□□ 1.37
CHCHD1-201ENST00000372833 RBM46Q8TBY0 533 aaKnown RBP23.63■■□□□ 1.37
CHCHD1-201ENST00000372833 RRAGCQ9HB90 399 aa23.63■■□□□ 1.37
CHCHD1-201ENST00000372833 CEMIPQ8WUJ3 1361 aa23.63■■□□□ 1.37
CHCHD1-201ENST00000372833 LMNB1P20700 586 aa23.62■■□□□ 1.37
CHCHD1-201ENST00000372833 PPP2R1AP30153 589 aa23.62■■□□□ 1.37
CHCHD1-201ENST00000372833 PDE6BP35913 854 aa23.62■■□□□ 1.37
CHCHD1-201ENST00000372833 SIPA1L3O60292 1781 aaPredicted RBP23.62■■□□□ 1.37
CHCHD1-201ENST00000372833 KCNQ3O43525 872 aa23.61■■□□□ 1.37
CHCHD1-201ENST00000372833 MCM10Q7L590 875 aa23.61■■□□□ 1.37
CHCHD1-201ENST00000372833 CCDC24Q8N4L8 307 aa23.61■■□□□ 1.37
CHCHD1-201ENST00000372833 SETDB2Q96T68 719 aa23.61■■□□□ 1.37
CHCHD1-201ENST00000372833 ZNF219Q9P2Y4 722 aaPredicted RBP23.61■■□□□ 1.37
CHCHD1-201ENST00000372833 DZIP3Q86Y13 1208 aaKnown RBP23.6■■□□□ 1.37
CHCHD1-201ENST00000372833 SCN7AQ01118 1682 aa23.6■■□□□ 1.37
CHCHD1-201ENST00000372833 NEFMP07197 916 aa23.59■■□□□ 1.37
CHCHD1-201ENST00000372833 PRR5LQ6MZQ0 368 aa23.59■■□□□ 1.37
CHCHD1-201ENST00000372833 CNBD1Q8NA66 436 aa23.59■■□□□ 1.37
CHCHD1-201ENST00000372833 BRIP1Q9BX63 1249 aa23.59■■□□□ 1.37
CHCHD1-201ENST00000372833 PDZRN3Q9UPQ7 1066 aa23.59■■□□□ 1.37
CHCHD1-201ENST00000372833 DLEC1Q9Y238 1755 aa23.59■■□□□ 1.37
CHCHD1-201ENST00000372833 ZC3H4Q9UPT8 1303 aaKnown RBP23.59■■□□□ 1.37
CHCHD1-201ENST00000372833 PIP4K2AP48426 406 aaPredicted RBP23.58■■□□□ 1.37
CHCHD1-201ENST00000372833 ST5P78524 1137 aa23.58■■□□□ 1.37
CHCHD1-201ENST00000372833 SBF1O95248 1867 aa23.58■■□□□ 1.36
CHCHD1-201ENST00000372833 CAMTA2O94983 1202 aa23.57■■□□□ 1.36
CHCHD1-201ENST00000372833 FSTL1Q12841 308 aa23.57■■□□□ 1.36
CHCHD1-201ENST00000372833 USP16Q9Y5T5 823 aa23.57■■□□□ 1.36
CHCHD1-201ENST00000372833 TNRC6CQ9HCJ0 1690 aaKnown RBP23.57■■□□□ 1.36
CHCHD1-201ENST00000372833 SNRPA1P09661 255 aaKnown RBP23.56■■□□□ 1.36
CHCHD1-201ENST00000372833 C21orf2O43822 256 aa23.55■■□□□ 1.36
CHCHD1-201ENST00000372833 DCTN1Q14203 1278 aa23.55■■□□□ 1.36
CHCHD1-201ENST00000372833 IFFO2Q5TF58 517 aa23.55■■□□□ 1.36
CHCHD1-201ENST00000372833 ZNF652Q9Y2D9 606 aa23.55■■□□□ 1.36
CHCHD1-201ENST00000372833 PRAMEF22A3QJZ6 481 aa23.54■■□□□ 1.36
CHCHD1-201ENST00000372833 GLTPD2A6NH11 291 aa23.53■■□□□ 1.36
CHCHD1-201ENST00000372833 NFKBIEO00221 500 aa23.53■■□□□ 1.36
CHCHD1-201ENST00000372833 NBPF5PQ86XG9 351 aaPredicted RBP23.53■■□□□ 1.36
CHCHD1-201ENST00000372833 SMC1BQ8NDV3 1235 aa23.53■■□□□ 1.36
CHCHD1-201ENST00000372833 DPY19L2Q6NUT2 758 aa23.52■■□□□ 1.36
CHCHD1-201ENST00000372833 CNKSR1Q969H4 720 aa23.52■■□□□ 1.36
CHCHD1-201ENST00000372833 ANKRD31Q8N7Z5 1873 aa23.51■■□□□ 1.35
CHCHD1-201ENST00000372833 HTATSF1O43719 755 aaKnown RBP23.51■■□□□ 1.35
CHCHD1-201ENST00000372833 VEGFAP15692 232 aaPredicted RBP23.51■■□□□ 1.35
CHCHD1-201ENST00000372833 PRELPP51888 382 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms