RNA–Protein interactions for RNA: ENST00000372638.3

CITED4-201, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4, humanhuman

APPRIS P1 BASIC

Gene CITED4, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4-201ENST00000372638 MRS2Q9HD23 443 aa31■■■□□ 2.55
CITED4-201ENST00000372638 RFC4P35249 363 aa30.98■■■□□ 2.55
CITED4-201ENST00000372638 MIS18AQ9NYP9 233 aa30.98■■■□□ 2.55
CITED4-201ENST00000372638 SNRPA1P09661 255 aaKnown RBP30.95■■■□□ 2.54
CITED4-201ENST00000372638 ZBTB1Q9Y2K1 713 aa30.95■■■□□ 2.54
CITED4-201ENST00000372638 FHDC1Q9C0D6 1143 aaPredicted RBP30.94■■■□□ 2.54
CITED4-201ENST00000372638 SOS1Q07889 1333 aaPredicted RBP30.94■■■□□ 2.54
CITED4-201ENST00000372638 TRIM35Q9UPQ4 493 aa30.93■■■□□ 2.54
CITED4-201ENST00000372638 APAF1O14727 1248 aa30.92■■■□□ 2.54
CITED4-201ENST00000372638 CANXP27824 592 aaKnown RBP30.92■■■□□ 2.54
CITED4-201ENST00000372638 NLGN1Q8N2Q7 840 aa30.92■■■□□ 2.54
CITED4-201ENST00000372638 SYT17Q9BSW7 474 aa30.91■■■□□ 2.54
CITED4-201ENST00000372638 USP16Q9Y5T5 823 aa30.91■■■□□ 2.54
CITED4-201ENST00000372638 BABAM1Q9NWV8 329 aa30.9■■■□□ 2.54
CITED4-201ENST00000372638 KDM3BQ7LBC6 1761 aa30.89■■■□□ 2.54
CITED4-201ENST00000372638 GYS1P13807 737 aa30.89■■■□□ 2.54
CITED4-201ENST00000372638 TSPYL4Q9UJ04 414 aa30.89■■■□□ 2.54
CITED4-201ENST00000372638 EIF4A1P60842 406 aaKnown RBP30.88■■■□□ 2.53
CITED4-201ENST00000372638 C4AP0C0L4 1744 aa30.87■■■□□ 2.53
CITED4-201ENST00000372638 USP42Q9H9J4 1324 aaKnown RBP30.87■■■□□ 2.53
CITED4-201ENST00000372638 PRAMEF22A3QJZ6 481 aa30.87■■■□□ 2.53
CITED4-201ENST00000372638 ZPR1O75312 459 aa30.87■■■□□ 2.53
CITED4-201ENST00000372638 A1BGP04217 495 aa30.87■■■□□ 2.53
CITED4-201ENST00000372638 EIF5P55010 431 aaKnown RBP30.87■■■□□ 2.53
CITED4-201ENST00000372638 KLHL34Q8N239 644 aa30.87■■■□□ 2.53
CITED4-201ENST00000372638 SRP68Q9UHB9 627 aaKnown RBP30.87■■■□□ 2.53
CITED4-201ENST00000372638 COL15A1P39059 1388 aa30.86■■■□□ 2.53
CITED4-201ENST00000372638 A0A087WZG4 1122 aa30.85■■■□□ 2.53
CITED4-201ENST00000372638 IL6STP40189 918 aaPredicted RBP30.85■■■□□ 2.53
CITED4-201ENST00000372638 NPM2Q86SE8 214 aaKnown RBP30.84■■■□□ 2.53
CITED4-201ENST00000372638 NARFQ9UHQ1 456 aa30.84■■■□□ 2.53
CITED4-201ENST00000372638 GIGYF1O75420 1035 aaPredicted RBP30.83■■■□□ 2.53
CITED4-201ENST00000372638 MMP10P09238 476 aa30.83■■■□□ 2.53
CITED4-201ENST00000372638 USPL1Q5W0Q7 1092 aa30.82■■■□□ 2.52
CITED4-201ENST00000372638 ZNF330Q9Y3S2 320 aaPredicted RBP30.81■■■□□ 2.52
CITED4-201ENST00000372638 LAS1LQ9Y4W2 734 aaKnown RBP30.81■■■□□ 2.52
CITED4-201ENST00000372638 DCAF8L1A6NGE4 600 aa30.8■■■□□ 2.52
CITED4-201ENST00000372638 CHL1O00533 1208 aa30.8■■■□□ 2.52
CITED4-201ENST00000372638 FKBP8Q14318 412 aa30.8■■■□□ 2.52
CITED4-201ENST00000372638 CD2APQ9Y5K6 639 aa30.79■■■□□ 2.52
CITED4-201ENST00000372638 CALD1Q05682 793 aaKnown RBP30.78■■■□□ 2.52
CITED4-201ENST00000372638 PARP3Q9Y6F1 533 aa30.77■■■□□ 2.52
CITED4-201ENST00000372638 PIP4K2AP48426 406 aaPredicted RBP30.76■■■□□ 2.52
CITED4-201ENST00000372638 CFAP44Q96MT7 982 aa30.76■■■□□ 2.52
CITED4-201ENST00000372638 FAM9BQ8IZU0 186 aa30.75■■■□□ 2.51
CITED4-201ENST00000372638 TBC1D2BQ9UPU7 963 aa30.75■■■□□ 2.51
CITED4-201ENST00000372638 LAMB4A4D0S4 1761 aa30.74■■■□□ 2.51
CITED4-201ENST00000372638 NBPF26B4DH59 902 aa30.74■■■□□ 2.51
CITED4-201ENST00000372638 NBPF10Q6P3W6 841 aaKnown RBP30.74■■■□□ 2.51
CITED4-201ENST00000372638 NBPF15Q8N660 670 aa30.74■■■□□ 2.51
CITED4-201ENST00000372638 YY1P25490 414 aa30.73■■■□□ 2.51
CITED4-201ENST00000372638 TM4SF1P30408 202 aa30.73■■■□□ 2.51
CITED4-201ENST00000372638 BCL2L12Q9HB09 334 aa30.73■■■□□ 2.51
CITED4-201ENST00000372638 NCBP3Q53F19 620 aaKnown RBP30.73■■■□□ 2.51
CITED4-201ENST00000372638 NLGN2Q8NFZ4 835 aa30.73■■■□□ 2.51
CITED4-201ENST00000372638 CCDC27Q2M243 656 aa30.72■■■□□ 2.51
CITED4-201ENST00000372638 DZIP3Q86Y13 1208 aaKnown RBP30.72■■■□□ 2.51
CITED4-201ENST00000372638 ZNF853P0CG23 659 aa30.71■■■□□ 2.51
CITED4-201ENST00000372638 GNAI1P63096 354 aa30.71■■■□□ 2.51
CITED4-201ENST00000372638 IFT57Q9NWB7 429 aa30.71■■■□□ 2.51
CITED4-201ENST00000372638 SENP3-EIF4A1A0A087X0R7 540 aa30.69■■■□□ 2.5
CITED4-201ENST00000372638 DDR1Q08345 913 aa30.69■■■□□ 2.5
CITED4-201ENST00000372638 NFIXQ14938 502 aa30.69■■■□□ 2.5
CITED4-201ENST00000372638 CAMTA2O94983 1202 aa30.68■■■□□ 2.5
CITED4-201ENST00000372638 EIF2S2P20042 333 aaKnown RBP30.68■■■□□ 2.5
CITED4-201ENST00000372638 MBIPQ9NS73 344 aa30.68■■■□□ 2.5
CITED4-201ENST00000372638 ERBB4Q15303 1308 aa30.68■■■□□ 2.5
CITED4-201ENST00000372638 POLRMTO00411 1230 aaKnown RBP30.67■■■□□ 2.5
CITED4-201ENST00000372638 WWC1Q8IX03 1113 aa30.67■■■□□ 2.5
CITED4-201ENST00000372638 KRT24Q2M2I5 525 aa30.65■■■□□ 2.5
CITED4-201ENST00000372638 BICDL1Q6ZP65 573 aa30.64■■■□□ 2.5
CITED4-201ENST00000372638 SCN7AQ01118 1682 aa30.63■■■□□ 2.49
CITED4-201ENST00000372638 CCER2I3L3R5 266 aa30.63■■■□□ 2.49
CITED4-201ENST00000372638 HOXB7P09629 217 aa30.63■■■□□ 2.49
CITED4-201ENST00000372638 MYL6BP14649 208 aa30.63■■■□□ 2.49
CITED4-201ENST00000372638 GPR162Q16538 588 aa30.63■■■□□ 2.49
CITED4-201ENST00000372638 TBC1D9BQ66K14 1250 aa30.63■■■□□ 2.49
CITED4-201ENST00000372638 CLEC4GQ6UXB4 293 aa30.63■■■□□ 2.49
CITED4-201ENST00000372638 NGEFQ8N5V2 710 aa30.63■■■□□ 2.49
CITED4-201ENST00000372638 TGFB2P61812 414 aa30.62■■■□□ 2.49
CITED4-201ENST00000372638 ZNF652Q9Y2D9 606 aa30.62■■■□□ 2.49
CITED4-201ENST00000372638 C10orf71Q711Q0 1435 aa30.62■■■□□ 2.49
CITED4-201ENST00000372638 RGL2O15211 777 aa30.61■■■□□ 2.49
CITED4-201ENST00000372638 SERPINB2P05120 415 aa30.61■■■□□ 2.49
CITED4-201ENST00000372638 SALL2Q9Y467 1007 aaPredicted RBP30.61■■■□□ 2.49
CITED4-201ENST00000372638 KIF13BQ9NQT8 1826 aa30.61■■■□□ 2.49
CITED4-201ENST00000372638 DIEXFQ68CQ4 756 aaKnown RBP30.6■■■□□ 2.49
CITED4-201ENST00000372638 PELP1Q8IZL8 1130 aaKnown RBP30.6■■■□□ 2.49
CITED4-201ENST00000372638 DUSP27Q5VZP5 1158 aa30.59■■■□□ 2.49
CITED4-201ENST00000372638 NECTIN2Q92692 538 aa30.59■■■□□ 2.49
CITED4-201ENST00000372638 SETDB2Q96T68 719 aa30.59■■■□□ 2.49
CITED4-201ENST00000372638 BCORQ6W2J9 1755 aa30.59■■■□□ 2.49
CITED4-201ENST00000372638 PDIA6Q15084 440 aa30.58■■■□□ 2.49
CITED4-201ENST00000372638 IL16Q14005 1332 aa30.57■■■□□ 2.49
CITED4-201ENST00000372638 KIF6Q6ZMV9 814 aa30.57■■■□□ 2.48
CITED4-201ENST00000372638 ERVV-1B6SEH8 477 aa30.56■■■□□ 2.48
CITED4-201ENST00000372638 HDGFL1Q5TGJ6 251 aa30.56■■■□□ 2.48
CITED4-201ENST00000372638 WDR63Q8IWG1 891 aa30.56■■■□□ 2.48
CITED4-201ENST00000372638 AFDNP55196 1824 aaKnown RBP30.56■■■□□ 2.48
CITED4-201ENST00000372638 TTLL7Q6ZT98 887 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms