RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 ZBTB1Q9Y2K1 713 aa26.42■■□□□ 1.82
TMEM53-205ENST00000372244 DLG5Q8TDM6 1919 aa26.4■■□□□ 1.82
TMEM53-205ENST00000372244 CCDC184Q52MB2 194 aa26.4■■□□□ 1.82
TMEM53-205ENST00000372244 PNISRQ8TF01 805 aaKnown RBP26.4■■□□□ 1.82
TMEM53-205ENST00000372244 USP16Q9Y5T5 823 aa26.39■■□□□ 1.82
TMEM53-205ENST00000372244 ANP32CO43423 234 aa26.38■■□□□ 1.81
TMEM53-205ENST00000372244 SNRPA1P09661 255 aaKnown RBP26.38■■□□□ 1.81
TMEM53-205ENST00000372244 EIF5P55010 431 aaKnown RBP26.38■■□□□ 1.81
TMEM53-205ENST00000372244 USP42Q9H9J4 1324 aaKnown RBP26.38■■□□□ 1.81
TMEM53-205ENST00000372244 SRP68Q9UHB9 627 aaKnown RBP26.37■■□□□ 1.81
TMEM53-205ENST00000372244 CD2APQ9Y5K6 639 aa26.37■■□□□ 1.81
TMEM53-205ENST00000372244 MMP10P09238 476 aa26.36■■□□□ 1.81
TMEM53-205ENST00000372244 CANXP27824 592 aaKnown RBP26.36■■□□□ 1.81
TMEM53-205ENST00000372244 LMOD3Q0VAK6 560 aa26.36■■□□□ 1.81
TMEM53-205ENST00000372244 RRP7AQ9Y3A4 280 aaKnown RBP26.36■■□□□ 1.81
TMEM53-205ENST00000372244 UTRNP46939 3433 aa26.35■■□□□ 1.81
TMEM53-205ENST00000372244 PRAMEF22A3QJZ6 481 aa26.35■■□□□ 1.81
TMEM53-205ENST00000372244 A1BGP04217 495 aa26.35■■□□□ 1.81
TMEM53-205ENST00000372244 NARFQ9UHQ1 456 aa26.35■■□□□ 1.81
TMEM53-205ENST00000372244 TRIM35Q9UPQ4 493 aa26.35■■□□□ 1.81
TMEM53-205ENST00000372244 FKBP8Q14318 412 aa26.34■■□□□ 1.81
TMEM53-205ENST00000372244 NLGN2Q8NFZ4 835 aa26.34■■□□□ 1.81
TMEM53-205ENST00000372244 COL15A1P39059 1388 aa26.33■■□□□ 1.81
TMEM53-205ENST00000372244 ZPR1O75312 459 aa26.33■■□□□ 1.81
TMEM53-205ENST00000372244 EIF4A1P60842 406 aaKnown RBP26.33■■□□□ 1.81
TMEM53-205ENST00000372244 NEUROD2Q15784 382 aa26.33■■□□□ 1.81
TMEM53-205ENST00000372244 KLHL34Q8N239 644 aa26.33■■□□□ 1.81
TMEM53-205ENST00000372244 BABAM1Q9NWV8 329 aa26.33■■□□□ 1.81
TMEM53-205ENST00000372244 IL6STP40189 918 aaPredicted RBP26.32■■□□□ 1.8
TMEM53-205ENST00000372244 DCAF8L1A6NGE4 600 aa26.31■■□□□ 1.8
TMEM53-205ENST00000372244 USPL1Q5W0Q7 1092 aa26.31■■□□□ 1.8
TMEM53-205ENST00000372244 A0A087WZG4 1122 aa26.3■■□□□ 1.8
TMEM53-205ENST00000372244 GIGYF1O75420 1035 aaPredicted RBP26.3■■□□□ 1.8
TMEM53-205ENST00000372244 TM4SF1P30408 202 aa26.3■■□□□ 1.8
TMEM53-205ENST00000372244 C4AP0C0L4 1744 aa26.3■■□□□ 1.8
TMEM53-205ENST00000372244 BCL2L12Q9HB09 334 aa26.3■■□□□ 1.8
TMEM53-205ENST00000372244 APAF1O14727 1248 aa26.29■■□□□ 1.8
TMEM53-205ENST00000372244 TSPYL4Q9UJ04 414 aa26.28■■□□□ 1.8
TMEM53-205ENST00000372244 GOLGB1Q14789 3259 aaKnown RBP26.28■■□□□ 1.8
TMEM53-205ENST00000372244 CHL1O00533 1208 aa26.27■■□□□ 1.8
TMEM53-205ENST00000372244 PARP3Q9Y6F1 533 aa26.27■■□□□ 1.8
TMEM53-205ENST00000372244 NBPF26B4DH59 902 aa26.25■■□□□ 1.79
TMEM53-205ENST00000372244 DDR1Q08345 913 aa26.25■■□□□ 1.79
TMEM53-205ENST00000372244 NBPF10Q6P3W6 841 aaKnown RBP26.25■■□□□ 1.79
TMEM53-205ENST00000372244 NBPF15Q8N660 670 aa26.25■■□□□ 1.79
TMEM53-205ENST00000372244 MRS2Q9HD23 443 aa26.25■■□□□ 1.79
TMEM53-205ENST00000372244 TBC1D2BQ9UPU7 963 aa26.24■■□□□ 1.79
TMEM53-205ENST00000372244 KDM3BQ7LBC6 1761 aa26.24■■□□□ 1.79
TMEM53-205ENST00000372244 POLRMTO00411 1230 aaKnown RBP26.23■■□□□ 1.79
TMEM53-205ENST00000372244 PIP4K2AP48426 406 aaPredicted RBP26.23■■□□□ 1.79
TMEM53-205ENST00000372244 NFIXQ14938 502 aa26.23■■□□□ 1.79
TMEM53-205ENST00000372244 GPR162Q16538 588 aa26.22■■□□□ 1.79
TMEM53-205ENST00000372244 ZNF330Q9Y3S2 320 aaPredicted RBP26.22■■□□□ 1.79
TMEM53-205ENST00000372244 CAMTA2O94983 1202 aa26.21■■□□□ 1.79
TMEM53-205ENST00000372244 NPM2Q86SE8 214 aaKnown RBP26.21■■□□□ 1.79
TMEM53-205ENST00000372244 TGFB2P61812 414 aa26.2■■□□□ 1.78
TMEM53-205ENST00000372244 CFAP44Q96MT7 982 aa26.19■■□□□ 1.78
TMEM53-205ENST00000372244 DZIP3Q86Y13 1208 aaKnown RBP26.18■■□□□ 1.78
TMEM53-205ENST00000372244 C10orf71Q711Q0 1435 aa26.18■■□□□ 1.78
TMEM53-205ENST00000372244 ZNF853P0CG23 659 aa26.17■■□□□ 1.78
TMEM53-205ENST00000372244 YBX3P16989 372 aaKnown RBP eCLIP26.17■■□□□ 1.78
TMEM53-205ENST00000372244 TBC1D9BQ66K14 1250 aa26.17■■□□□ 1.78
TMEM53-205ENST00000372244 CLEC4GQ6UXB4 293 aa26.17■■□□□ 1.78
TMEM53-205ENST00000372244 LAS1LQ9Y4W2 734 aaKnown RBP26.17■■□□□ 1.78
TMEM53-205ENST00000372244 RGL2O15211 777 aa26.16■■□□□ 1.78
TMEM53-205ENST00000372244 NCBP3Q53F19 620 aaKnown RBP26.15■■□□□ 1.78
TMEM53-205ENST00000372244 SERPINB2P05120 415 aa26.14■■□□□ 1.78
TMEM53-205ENST00000372244 KIF13BQ9NQT8 1826 aa26.14■■□□□ 1.77
TMEM53-205ENST00000372244 ERBB4Q15303 1308 aa26.13■■□□□ 1.77
TMEM53-205ENST00000372244 A0A0G2JLW4 131 aa26.13■■□□□ 1.77
TMEM53-205ENST00000372244 CALD1Q05682 793 aaKnown RBP26.13■■□□□ 1.77
TMEM53-205ENST00000372244 CCDC27Q2M243 656 aa26.13■■□□□ 1.77
TMEM53-205ENST00000372244 PELP1Q8IZL8 1130 aaKnown RBP26.13■■□□□ 1.77
TMEM53-205ENST00000372244 GRIN3BO60391 1043 aa26.12■■□□□ 1.77
TMEM53-205ENST00000372244 PDIA6Q15084 440 aa26.12■■□□□ 1.77
TMEM53-205ENST00000372244 BICDL1Q6ZP65 573 aa26.12■■□□□ 1.77
TMEM53-205ENST00000372244 IFT57Q9NWB7 429 aa26.12■■□□□ 1.77
TMEM53-205ENST00000372244 PXDNLA1KZ92 1463 aa26.12■■□□□ 1.77
TMEM53-205ENST00000372244 DPEP1P16444 411 aa26.11■■□□□ 1.77
TMEM53-205ENST00000372244 KCNA3P22001 575 aa26.11■■□□□ 1.77
TMEM53-205ENST00000372244 KRT24Q2M2I5 525 aa26.11■■□□□ 1.77
TMEM53-205ENST00000372244 MBIPQ9NS73 344 aa26.11■■□□□ 1.77
TMEM53-205ENST00000372244 EIF2S2P20042 333 aaKnown RBP26.11■■□□□ 1.77
TMEM53-205ENST00000372244 LRP10Q7Z4F1 713 aa26.11■■□□□ 1.77
TMEM53-205ENST00000372244 SETDB2Q96T68 719 aa26.11■■□□□ 1.77
TMEM53-205ENST00000372244 GNAI1P63096 354 aa26.1■■□□□ 1.77
TMEM53-205ENST00000372244 ERVV-1B6SEH8 477 aa26.09■■□□□ 1.77
TMEM53-205ENST00000372244 HOXB7P09629 217 aa26.09■■□□□ 1.77
TMEM53-205ENST00000372244 MYL6BP14649 208 aa26.09■■□□□ 1.77
TMEM53-205ENST00000372244 WWC1Q8IX03 1113 aa26.09■■□□□ 1.77
TMEM53-205ENST00000372244 ZNF652Q9Y2D9 606 aa26.09■■□□□ 1.77
TMEM53-205ENST00000372244 LAMB4A4D0S4 1761 aa26.08■■□□□ 1.77
TMEM53-205ENST00000372244 YY1P25490 414 aa26.08■■□□□ 1.77
TMEM53-205ENST00000372244 NGEFQ8N5V2 710 aa26.08■■□□□ 1.77
TMEM53-205ENST00000372244 HLFQ16534 295 aa26.07■■□□□ 1.76
TMEM53-205ENST00000372244 SCN7AQ01118 1682 aa26.07■■□□□ 1.76
TMEM53-205ENST00000372244 CARMIL3Q8ND23 1372 aa26.07■■□□□ 1.76
TMEM53-205ENST00000372244 TTLL7Q6ZT98 887 aa26.06■■□□□ 1.76
TMEM53-205ENST00000372244 NRXN2Q9P2S2 1712 aa26.06■■□□□ 1.76
TMEM53-205ENST00000372244 KIAA1551Q9HCM1 1747 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms