RNA–Protein interactions for RNA: ENST00000369641.7

FAM3A-203, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-203ENST00000369641 CCDC87Q9NVE4 849 aa25.55■■□□□ 1.68
FAM3A-203ENST00000369641 ZBTB1Q9Y2K1 713 aa25.55■■□□□ 1.68
FAM3A-203ENST00000369641 SNRPA1P09661 255 aaKnown RBP25.54■■□□□ 1.68
FAM3A-203ENST00000369641 RTCBQ9Y3I0 505 aaKnown RBP25.54■■□□□ 1.68
FAM3A-203ENST00000369641 LAMB4A4D0S4 1761 aa25.53■■□□□ 1.68
FAM3A-203ENST00000369641 C4AP0C0L4 1744 aa25.53■■□□□ 1.68
FAM3A-203ENST00000369641 CFAP44Q96MT7 982 aa25.53■■□□□ 1.68
FAM3A-203ENST00000369641 LRP5O75197 1615 aa25.52■■□□□ 1.68
FAM3A-203ENST00000369641 GIGYF1O75420 1035 aaPredicted RBP25.52■■□□□ 1.68
FAM3A-203ENST00000369641 TEX13AQ9BXU3 409 aaPredicted RBP25.52■■□□□ 1.68
FAM3A-203ENST00000369641 COL24A1Q17RW2 1714 aa25.52■■□□□ 1.68
FAM3A-203ENST00000369641 A1BGP04217 495 aa25.51■■□□□ 1.67
FAM3A-203ENST00000369641 KRT24Q2M2I5 525 aa25.51■■□□□ 1.67
FAM3A-203ENST00000369641 FLAD1Q8NFF5 587 aa25.51■■□□□ 1.67
FAM3A-203ENST00000369641 ARHGEF1Q92888 912 aaKnown RBP25.51■■□□□ 1.67
FAM3A-203ENST00000369641 MBIPQ9NS73 344 aa25.51■■□□□ 1.67
FAM3A-203ENST00000369641 ATF5Q9Y2D1 282 aaPredicted RBP25.51■■□□□ 1.67
FAM3A-203ENST00000369641 SOS1Q07889 1333 aaPredicted RBP25.5■■□□□ 1.67
FAM3A-203ENST00000369641 MSH5O43196 834 aa25.5■■□□□ 1.67
FAM3A-203ENST00000369641 STARD3NLO95772 234 aa25.5■■□□□ 1.67
FAM3A-203ENST00000369641 IFT57Q9NWB7 429 aa25.5■■□□□ 1.67
FAM3A-203ENST00000369641 MTFR1LQ9H019 292 aa25.49■■□□□ 1.67
FAM3A-203ENST00000369641 CANXP27824 592 aaKnown RBP25.48■■□□□ 1.67
FAM3A-203ENST00000369641 PTGER2P43116 358 aa25.48■■□□□ 1.67
FAM3A-203ENST00000369641 PIP4K2AP48426 406 aaPredicted RBP25.48■■□□□ 1.67
FAM3A-203ENST00000369641 TRAPPC3LQ5T215 181 aa25.48■■□□□ 1.67
FAM3A-203ENST00000369641 SLC16A10Q8TF71 515 aa25.48■■□□□ 1.67
FAM3A-203ENST00000369641 SGIP1Q9BQI5 828 aa25.48■■□□□ 1.67
FAM3A-203ENST00000369641 SPON1Q9HCB6 807 aa25.47■■□□□ 1.67
FAM3A-203ENST00000369641 ADRA2BP18089 450 aa25.46■■□□□ 1.67
FAM3A-203ENST00000369641 GNAI1P63096 354 aa25.46■■□□□ 1.67
FAM3A-203ENST00000369641 CALD1Q05682 793 aaKnown RBP25.46■■□□□ 1.67
FAM3A-203ENST00000369641 MSL1Q68DK7 614 aa25.45■■□□□ 1.67
FAM3A-203ENST00000369641 NBPF26B4DH59 902 aa25.44■■□□□ 1.66
FAM3A-203ENST00000369641 EIF5P55010 431 aaKnown RBP25.44■■□□□ 1.66
FAM3A-203ENST00000369641 NBPF10Q6P3W6 841 aaKnown RBP25.44■■□□□ 1.66
FAM3A-203ENST00000369641 NBPF15Q8N660 670 aa25.44■■□□□ 1.66
FAM3A-203ENST00000369641 SRP68Q9UHB9 627 aaKnown RBP25.44■■□□□ 1.66
FAM3A-203ENST00000369641 COL15A1P39059 1388 aa25.44■■□□□ 1.66
FAM3A-203ENST00000369641 ZNF521Q96K83 1311 aa25.44■■□□□ 1.66
FAM3A-203ENST00000369641 SPINK5Q9NQ38 1064 aaPredicted RBP25.44■■□□□ 1.66
FAM3A-203ENST00000369641 IL16Q14005 1332 aa25.43■■□□□ 1.66
FAM3A-203ENST00000369641 WDR63Q8IWG1 891 aa25.43■■□□□ 1.66
FAM3A-203ENST00000369641 TSR2Q969E8 191 aaKnown RBP25.43■■□□□ 1.66
FAM3A-203ENST00000369641 NGEFQ8N5V2 710 aa25.42■■□□□ 1.66
FAM3A-203ENST00000369641 GYS1P13807 737 aa25.41■■□□□ 1.66
FAM3A-203ENST00000369641 RFC4P35249 363 aa25.41■■□□□ 1.66
FAM3A-203ENST00000369641 IL6STP40189 918 aaPredicted RBP25.41■■□□□ 1.66
FAM3A-203ENST00000369641 USP42Q9H9J4 1324 aaKnown RBP25.4■■□□□ 1.66
FAM3A-203ENST00000369641 SRCAPQ6ZRS2 3230 aa25.4■■□□□ 1.66
FAM3A-203ENST00000369641 EIF2S2P20042 333 aaKnown RBP25.39■■□□□ 1.65
FAM3A-203ENST00000369641 C8orf58Q8NAV2 365 aa25.38■■□□□ 1.65
FAM3A-203ENST00000369641 BCL2L12Q9HB09 334 aa25.38■■□□□ 1.65
FAM3A-203ENST00000369641 ZNF330Q9Y3S2 320 aaPredicted RBP25.38■■□□□ 1.65
FAM3A-203ENST00000369641 PDIA6Q15084 440 aa25.37■■□□□ 1.65
FAM3A-203ENST00000369641 DUSP27Q5VZP5 1158 aa25.37■■□□□ 1.65
FAM3A-203ENST00000369641 USPL1Q5W0Q7 1092 aa25.37■■□□□ 1.65
FAM3A-203ENST00000369641 NECTIN2Q92692 538 aa25.37■■□□□ 1.65
FAM3A-203ENST00000369641 NARFQ9UHQ1 456 aa25.37■■□□□ 1.65
FAM3A-203ENST00000369641 TSPYL6Q8N831 410 aa25.36■■□□□ 1.65
FAM3A-203ENST00000369641 TBC1D2BQ9UPU7 963 aa25.36■■□□□ 1.65
FAM3A-203ENST00000369641 FANCIQ9NVI1 1328 aa25.36■■□□□ 1.65
FAM3A-203ENST00000369641 SCN7AQ01118 1682 aa25.35■■□□□ 1.65
FAM3A-203ENST00000369641 ELL2O00472 640 aaPredicted RBP25.35■■□□□ 1.65
FAM3A-203ENST00000369641 FKBP8Q14318 412 aa25.35■■□□□ 1.65
FAM3A-203ENST00000369641 LRP10Q7Z4F1 713 aa25.35■■□□□ 1.65
FAM3A-203ENST00000369641 BCORQ6W2J9 1755 aa25.35■■□□□ 1.65
FAM3A-203ENST00000369641 ANXA1P04083 346 aa25.34■■□□□ 1.65
FAM3A-203ENST00000369641 PROSER3Q2NL68 480 aa25.34■■□□□ 1.65
FAM3A-203ENST00000369641 A0A087WZG4 1122 aa25.33■■□□□ 1.65
FAM3A-203ENST00000369641 HOXB7P09629 217 aa25.33■■□□□ 1.65
FAM3A-203ENST00000369641 MYL6BP14649 208 aa25.33■■□□□ 1.65
FAM3A-203ENST00000369641 ZPR1O75312 459 aa25.32■■□□□ 1.64
FAM3A-203ENST00000369641 CAMTA2O94983 1202 aa25.32■■□□□ 1.64
FAM3A-203ENST00000369641 ERBB4Q15303 1308 aa25.32■■□□□ 1.64
FAM3A-203ENST00000369641 POLD1P28340 1107 aa25.31■■□□□ 1.64
FAM3A-203ENST00000369641 DZIP3Q86Y13 1208 aaKnown RBP25.31■■□□□ 1.64
FAM3A-203ENST00000369641 NLGN1Q8N2Q7 840 aa25.31■■□□□ 1.64
FAM3A-203ENST00000369641 ARXQ96QS3 562 aa25.31■■□□□ 1.64
FAM3A-203ENST00000369641 HDGFL1Q5TGJ6 251 aa25.31■■□□□ 1.64
FAM3A-203ENST00000369641 TTLL7Q6ZT98 887 aa25.3■■□□□ 1.64
FAM3A-203ENST00000369641 CHPF2Q9P2E5 772 aa25.3■■□□□ 1.64
FAM3A-203ENST00000369641 MMP10P09238 476 aa25.29■■□□□ 1.64
FAM3A-203ENST00000369641 PPP1R1BQ9UD71 204 aaPredicted RBP25.29■■□□□ 1.64
FAM3A-203ENST00000369641 TM4SF1P30408 202 aa25.28■■□□□ 1.64
FAM3A-203ENST00000369641 EXOSC9Q06265 439 aaKnown RBP25.28■■□□□ 1.64
FAM3A-203ENST00000369641 GOLGA2Q08379 1002 aa25.28■■□□□ 1.64
FAM3A-203ENST00000369641 CDCA7LQ96GN5 454 aa25.28■■□□□ 1.64
FAM3A-203ENST00000369641 DDR1Q08345 913 aa25.27■■□□□ 1.64
FAM3A-203ENST00000369641 DDX21Q9NR30 783 aaKnown RBP eCLIP25.27■■□□□ 1.64
FAM3A-203ENST00000369641 SLFN5Q08AF3 891 aa25.26■■□□□ 1.63
FAM3A-203ENST00000369641 NFIXQ14938 502 aa25.26■■□□□ 1.63
FAM3A-203ENST00000369641 TWISTNBQ3B726 338 aaPredicted RBP25.26■■□□□ 1.63
FAM3A-203ENST00000369641 NPM2Q86SE8 214 aaKnown RBP25.26■■□□□ 1.63
FAM3A-203ENST00000369641 HLFQ16534 295 aa25.25■■□□□ 1.63
FAM3A-203ENST00000369641 TBC1D9BQ66K14 1250 aa25.25■■□□□ 1.63
FAM3A-203ENST00000369641 FHDC1Q9C0D6 1143 aaPredicted RBP25.25■■□□□ 1.63
FAM3A-203ENST00000369641 MYH16Q9H6N6 1097 aa25.25■■□□□ 1.63
FAM3A-203ENST00000369641 AFDNP55196 1824 aaKnown RBP25.24■■□□□ 1.63
FAM3A-203ENST00000369641 NUP98P52948 1817 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms