RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 AMOTQ4VCS5 1084 aa7.61□□□□□ -1.19
SYCP1-201ENST00000369518 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYCP1-201ENST00000369518 MYH14Q7Z406 1995 aaKnown RBP7.6□□□□□ -1.19
SYCP1-201ENST00000369518 THSD7BQ9C0I4 1608 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 HSPA6P17066 643 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 STK24Q9Y6E0 443 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 FSTL1Q12841 308 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 NBPF6Q5VWK0 638 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 IFNL2Q8IZJ0 200 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 ACSBG1Q96GR2 724 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 NBPF4Q96M43 638 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 PDGFDQ9GZP0 370 aaPredicted RBP7.6□□□□□ -1.19
SYCP1-201ENST00000369518 SCN4AP35499 1836 aa7.6□□□□□ -1.19
SYCP1-201ENST00000369518 APLP1P51693 650 aa7.59□□□□□ -1.19
SYCP1-201ENST00000369518 RBM46Q8TBY0 533 aaKnown RBP7.59□□□□□ -1.19
SYCP1-201ENST00000369518 NLGN1Q8N2Q7 840 aa7.59□□□□□ -1.19
SYCP1-201ENST00000369518 SIN3AQ96ST3 1273 aa7.59□□□□□ -1.19
SYCP1-201ENST00000369518 TMC1Q8TDI8 760 aa7.59□□□□□ -1.19
SYCP1-201ENST00000369518 AK7Q96M32 723 aa7.58□□□□□ -1.2
SYCP1-201ENST00000369518 CANXP27824 592 aaKnown RBP7.58□□□□□ -1.2
SYCP1-201ENST00000369518 GTF2E1P29083 439 aaPredicted RBP7.58□□□□□ -1.2
SYCP1-201ENST00000369518 KCPQ6ZWJ8 1503 aa7.58□□□□□ -1.2
SYCP1-201ENST00000369518 SENP3-EIF4A1A0A087X0R7 540 aa7.58□□□□□ -1.2
SYCP1-201ENST00000369518 ST20-MTHFSA0A0A6YYL1 179 aa7.58□□□□□ -1.2
SYCP1-201ENST00000369518 APBB1O00213 710 aa7.58□□□□□ -1.2
SYCP1-201ENST00000369518 CYP27B1O15528 508 aa7.58□□□□□ -1.2
SYCP1-201ENST00000369518 PHKG2P15735 406 aa7.58□□□□□ -1.2
SYCP1-201ENST00000369518 YBX3P16989 372 aaKnown RBP eCLIP7.58□□□□□ -1.2
SYCP1-201ENST00000369518 DCAF5Q96JK2 942 aa7.58□□□□□ -1.2
SYCP1-201ENST00000369518 FAM193AP78312 1265 aa7.57□□□□□ -1.2
SYCP1-201ENST00000369518 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
SYCP1-201ENST00000369518 ANKRD31Q8N7Z5 1873 aa7.57□□□□□ -1.2
SYCP1-201ENST00000369518 IPO4Q8TEX9 1081 aaKnown RBP7.57□□□□□ -1.2
SYCP1-201ENST00000369518 RPS6KA4O75676 772 aa7.57□□□□□ -1.2
SYCP1-201ENST00000369518 DDX54Q8TDD1 881 aaKnown RBP7.57□□□□□ -1.2
SYCP1-201ENST00000369518 LOC102724428A0A0B4J2F2 783 aa7.56□□□□□ -1.2
SYCP1-201ENST00000369518 SIK1P57059 783 aa7.56□□□□□ -1.2
SYCP1-201ENST00000369518 CCDC27Q2M243 656 aa7.56□□□□□ -1.2
SYCP1-201ENST00000369518 ADAMTSL1Q8N6G6 1762 aa7.56□□□□□ -1.2
SYCP1-201ENST00000369518 FTSJ3Q8IY81 847 aaKnown RBP7.56□□□□□ -1.2
SYCP1-201ENST00000369518 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
SYCP1-201ENST00000369518 NLGN2Q8NFZ4 835 aa7.56□□□□□ -1.2
SYCP1-201ENST00000369518 RIC1Q4ADV7 1423 aa7.56□□□□□ -1.2
SYCP1-201ENST00000369518 RTL5Q5HYW3 569 aaPredicted RBP7.55□□□□□ -1.2
SYCP1-201ENST00000369518 TMOD3Q9NYL9 352 aa7.55□□□□□ -1.2
SYCP1-201ENST00000369518 PLEKHO1Q53GL0 409 aaPredicted RBP7.55□□□□□ -1.2
SYCP1-201ENST00000369518 PIGBQ92521 554 aa7.55□□□□□ -1.2
SYCP1-201ENST00000369518 CCDC88AQ3V6T2 1871 aa7.55□□□□□ -1.2
SYCP1-201ENST00000369518 YTHDC1Q96MU7 727 aaKnown RBP7.55□□□□□ -1.2
SYCP1-201ENST00000369518 PCGF6Q9BYE7 350 aa7.55□□□□□ -1.2
SYCP1-201ENST00000369518 LTBP3Q9NS15 1303 aa7.54□□□□□ -1.2
SYCP1-201ENST00000369518 KIF3CO14782 793 aa7.54□□□□□ -1.2
SYCP1-201ENST00000369518 TOMM70O94826 608 aa7.54□□□□□ -1.2
SYCP1-201ENST00000369518 TEX2Q8IWB9 1127 aa7.54□□□□□ -1.2
SYCP1-201ENST00000369518 GPBP1L1Q9HC44 474 aaPredicted RBP7.54□□□□□ -1.2
SYCP1-201ENST00000369518 LINC00116Q8NCU8 138 aa7.54□□□□□ -1.2
SYCP1-201ENST00000369518 COL11A2P13942 1736 aaPredicted RBP7.54□□□□□ -1.2
SYCP1-201ENST00000369518 CLSTN1O94985 981 aa7.54□□□□□ -1.2
SYCP1-201ENST00000369518 BRPF1P55201 1214 aaPredicted RBP7.54□□□□□ -1.2
SYCP1-201ENST00000369518 ERICH6BQ5W0A0 696 aa7.54□□□□□ -1.2
SYCP1-201ENST00000369518 ATG3Q9NT62 314 aa7.53□□□□□ -1.2
SYCP1-201ENST00000369518 COL3A1P02461 1466 aaPredicted RBP7.53□□□□□ -1.2
SYCP1-201ENST00000369518 EYA1Q99502 592 aa7.53□□□□□ -1.2
SYCP1-201ENST00000369518 CARD14Q9BXL6 1004 aa7.53□□□□□ -1.2
SYCP1-201ENST00000369518 POLKQ9UBT6 870 aa7.53□□□□□ -1.2
SYCP1-201ENST00000369518 RTCBQ9Y3I0 505 aaKnown RBP7.53□□□□□ -1.2
SYCP1-201ENST00000369518 KDM2BQ8NHM5 1336 aa7.53□□□□□ -1.2
SYCP1-201ENST00000369518 KDM3BQ7LBC6 1761 aa7.53□□□□□ -1.2
SYCP1-201ENST00000369518 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.53□□□□□ -1.2
SYCP1-201ENST00000369518 RGS3P49796 1198 aa7.53□□□□□ -1.2
SYCP1-201ENST00000369518 HSP90AB2PQ58FF8 381 aa7.53□□□□□ -1.2
SYCP1-201ENST00000369518 A0A087WZG4 1122 aa7.52□□□□□ -1.21
SYCP1-201ENST00000369518 ZNF316A6NFI3 1004 aaPredicted RBP7.52□□□□□ -1.21
SYCP1-201ENST00000369518 ANAPC15P60006 121 aa7.52□□□□□ -1.21
SYCP1-201ENST00000369518 TRAPPC3LQ5T215 181 aa7.52□□□□□ -1.21
SYCP1-201ENST00000369518 USP42Q9H9J4 1324 aaKnown RBP7.52□□□□□ -1.21
SYCP1-201ENST00000369518 MYCNP04198 464 aaPredicted RBP7.52□□□□□ -1.21
SYCP1-201ENST00000369518 RNF216Q9NWF9 866 aaPredicted RBP7.52□□□□□ -1.21
SYCP1-201ENST00000369518 DDX60Q8IY21 1712 aaKnown RBP7.52□□□□□ -1.21
SYCP1-201ENST00000369518 E9PSI1 815 aa7.51□□□□□ -1.21
SYCP1-201ENST00000369518 IBTKQ9P2D0 1353 aaPredicted RBP7.51□□□□□ -1.21
SYCP1-201ENST00000369518 GGNBP2Q9H3C7 697 aa7.51□□□□□ -1.21
SYCP1-201ENST00000369518 HMGB1P09429 215 aaKnown RBP7.51□□□□□ -1.21
SYCP1-201ENST00000369518 TM4SF1P30408 202 aa7.51□□□□□ -1.21
SYCP1-201ENST00000369518 ITPK1Q13572 414 aa7.51□□□□□ -1.21
SYCP1-201ENST00000369518 EIF4A2Q14240 407 aaKnown RBP7.51□□□□□ -1.21
SYCP1-201ENST00000369518 AKAP4Q5JQC9 854 aa7.51□□□□□ -1.21
SYCP1-201ENST00000369518 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
SYCP1-201ENST00000369518 GYS1P13807 737 aa7.5□□□□□ -1.21
SYCP1-201ENST00000369518 RRS1Q15050 365 aaKnown RBP7.5□□□□□ -1.21
SYCP1-201ENST00000369518 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
SYCP1-201ENST00000369518 SOS1Q07889 1333 aaPredicted RBP7.5□□□□□ -1.21
SYCP1-201ENST00000369518 ANKRD36CQ5JPF3 1778 aa7.5□□□□□ -1.21
SYCP1-201ENST00000369518 BRD1O95696 1058 aa7.5□□□□□ -1.21
SYCP1-201ENST00000369518 ATP6V1AP38606 617 aa7.5□□□□□ -1.21
SYCP1-201ENST00000369518 FOSBP53539 338 aa7.5□□□□□ -1.21
SYCP1-201ENST00000369518 GRIPAP1Q4V328 841 aa7.5□□□□□ -1.21
SYCP1-201ENST00000369518 SOGA3Q5TF21 947 aa7.5□□□□□ -1.21
SYCP1-201ENST00000369518 SYTL4Q96C24 671 aaPredicted RBP7.5□□□□□ -1.21
SYCP1-201ENST00000369518 LTV1Q96GA3 475 aaPredicted RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms