RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 USPL1Q5W0Q7 1092 aa21.47■■□□□ 1.03
C1orf43-203ENST00000368516 ZNF790Q6PG37 636 aa21.47■■□□□ 1.03
C1orf43-203ENST00000368516 BCS1LQ9Y276 419 aa21.47■■□□□ 1.03
C1orf43-203ENST00000368516 ZBTB1Q9Y2K1 713 aa21.47■■□□□ 1.03
C1orf43-203ENST00000368516 CEMIPQ8WUJ3 1361 aa21.47■■□□□ 1.03
C1orf43-203ENST00000368516 U2AF1L5P0DN76 240 aaPredicted RBP21.46■■□□□ 1.03
C1orf43-203ENST00000368516 U2AF1Q01081 240 aaKnown RBP eCLIP21.46■■□□□ 1.03
C1orf43-203ENST00000368516 PHACTR3Q96KR7 559 aa21.46■■□□□ 1.03
C1orf43-203ENST00000368516 NARFQ9UHQ1 456 aa21.46■■□□□ 1.03
C1orf43-203ENST00000368516 TM4SF1P30408 202 aa21.45■■□□□ 1.02
C1orf43-203ENST00000368516 TEX13AQ9BXU3 409 aaPredicted RBP21.45■■□□□ 1.02
C1orf43-203ENST00000368516 ARFGEF1Q9Y6D6 1849 aa21.45■■□□□ 1.02
C1orf43-203ENST00000368516 HEG1Q9ULI3 1381 aa21.45■■□□□ 1.02
C1orf43-203ENST00000368516 POLRMTO00411 1230 aaKnown RBP21.44■■□□□ 1.02
C1orf43-203ENST00000368516 ZNF496Q96IT1 587 aaPredicted RBP21.44■■□□□ 1.02
C1orf43-203ENST00000368516 GPBP1L1Q9HC44 474 aaPredicted RBP21.44■■□□□ 1.02
C1orf43-203ENST00000368516 FCHSD2O94868 740 aa21.43■■□□□ 1.02
C1orf43-203ENST00000368516 A0A087WZG4 1122 aa21.42■■□□□ 1.02
C1orf43-203ENST00000368516 CANXP27824 592 aaKnown RBP21.42■■□□□ 1.02
C1orf43-203ENST00000368516 AFDNP55196 1824 aaKnown RBP21.42■■□□□ 1.02
C1orf43-203ENST00000368516 FMNL2Q96PY5 1086 aa21.42■■□□□ 1.02
C1orf43-203ENST00000368516 PIM2Q9P1W9 311 aa21.42■■□□□ 1.02
C1orf43-203ENST00000368516 NRXN2Q9P2S2 1712 aa21.41■■□□□ 1.02
C1orf43-203ENST00000368516 SENP3-EIF4A1A0A087X0R7 540 aa21.41■■□□□ 1.02
C1orf43-203ENST00000368516 KCNA3P22001 575 aa21.41■■□□□ 1.02
C1orf43-203ENST00000368516 BTBD11A6QL63 1104 aa21.4■■□□□ 1.02
C1orf43-203ENST00000368516 EIF5P55010 431 aaKnown RBP21.4■■□□□ 1.02
C1orf43-203ENST00000368516 NFIXQ14938 502 aa21.4■■□□□ 1.02
C1orf43-203ENST00000368516 RTF1Q92541 710 aaKnown RBP21.4■■□□□ 1.02
C1orf43-203ENST00000368516 ARHGAP27Q6ZUM4 889 aa21.39■■□□□ 1.01
C1orf43-203ENST00000368516 ZNF526Q8TF50 670 aaPredicted RBP21.39■■□□□ 1.01
C1orf43-203ENST00000368516 SCN7AQ01118 1682 aa21.39■■□□□ 1.01
C1orf43-203ENST00000368516 DALRD3Q5D0E6 543 aaKnown RBP21.38■■□□□ 1.01
C1orf43-203ENST00000368516 BCL2L12Q9HB09 334 aa21.38■■□□□ 1.01
C1orf43-203ENST00000368516 HTATSF1O43719 755 aaKnown RBP21.36■■□□□ 1.01
C1orf43-203ENST00000368516 SERPINB2P05120 415 aa21.36■■□□□ 1.01
C1orf43-203ENST00000368516 CHRNA5P30532 468 aa21.36■■□□□ 1.01
C1orf43-203ENST00000368516 IL6STP40189 918 aaPredicted RBP21.36■■□□□ 1.01
C1orf43-203ENST00000368516 NPM2Q86SE8 214 aaKnown RBP21.36■■□□□ 1.01
C1orf43-203ENST00000368516 DLEC1Q9Y238 1755 aa21.36■■□□□ 1.01
C1orf43-203ENST00000368516 NEFMP07197 916 aa21.35■■□□□ 1.01
C1orf43-203ENST00000368516 MCM10Q7L590 875 aa21.35■■□□□ 1.01
C1orf43-203ENST00000368516 ZNF330Q9Y3S2 320 aaPredicted RBP21.35■■□□□ 1.01
C1orf43-203ENST00000368516 KCNQ3O43525 872 aa21.34■■□□□ 1.01
C1orf43-203ENST00000368516 DLG5Q8TDM6 1919 aa21.32■■□□□ 1
C1orf43-203ENST00000368516 A1BGP04217 495 aa21.32■■□□□ 1
C1orf43-203ENST00000368516 BICDL1Q6ZP65 573 aa21.32■■□□□ 1
C1orf43-203ENST00000368516 TBC1D2BQ9UPU7 963 aa21.32■■□□□ 1
C1orf43-203ENST00000368516 BCORQ6W2J9 1755 aa21.32■■□□□ 1
C1orf43-203ENST00000368516 DCTN1Q14203 1278 aa21.31■■□□□ 1
C1orf43-203ENST00000368516 CEP350Q5VT06 3117 aa21.3■■□□□ 1
C1orf43-203ENST00000368516 SNRPA1P09661 255 aaKnown RBP21.3■■□□□ 1
C1orf43-203ENST00000368516 TBC1D9BQ66K14 1250 aa21.3■■□□□ 1
C1orf43-203ENST00000368516 CARMIL3Q8ND23 1372 aa21.3■■□□□ 1
C1orf43-203ENST00000368516 C9orf131Q5VYM1 1079 aa21.29■■□□□ 1
C1orf43-203ENST00000368516 USP16Q9Y5T5 823 aa21.29■■□□□ 1
C1orf43-203ENST00000368516 TAF7Q15545 349 aaPredicted RBP21.28■■□□□ 1
C1orf43-203ENST00000368516 C2CD5Q86YS7 1000 aa21.28■■□□□ 1
C1orf43-203ENST00000368516 SBF1O95248 1867 aa21.28■■□□□ 1
C1orf43-203ENST00000368516 ANKRD31Q8N7Z5 1873 aa21.28■■□□□ 1
C1orf43-203ENST00000368516 H0YIN7 160 aa21.27■■□□□ 1
C1orf43-203ENST00000368516 KIF3CO14782 793 aa21.27■■□□□ 1
C1orf43-203ENST00000368516 CAMTA2O94983 1202 aa21.27■■□□□ 1
C1orf43-203ENST00000368516 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
C1orf43-203ENST00000368516 TTLL6Q8N841 843 aa21.27■■□□□ 1
C1orf43-203ENST00000368516 PNNQ9H307 717 aaKnown RBP21.27■■□□□ 1
C1orf43-203ENST00000368516 PDZRN3Q9UPQ7 1066 aa21.27■■□□□ 1
C1orf43-203ENST00000368516 LAMB4A4D0S4 1761 aa21.26■□□□□ 0.99
C1orf43-203ENST00000368516 PRAMEF22A3QJZ6 481 aa21.26■□□□□ 0.99
C1orf43-203ENST00000368516 SETDB2Q96T68 719 aa21.26■□□□□ 0.99
C1orf43-203ENST00000368516 KDM3BQ7LBC6 1761 aa21.25■□□□□ 0.99
C1orf43-203ENST00000368516 PDE6BP35913 854 aa21.25■□□□□ 0.99
C1orf43-203ENST00000368516 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
C1orf43-203ENST00000368516 PLEKHF1Q96S99 279 aa21.25■□□□□ 0.99
C1orf43-203ENST00000368516 BRIP1Q9BX63 1249 aa21.25■□□□□ 0.99
C1orf43-203ENST00000368516 RNF181Q9P0P0 153 aa21.25■□□□□ 0.99
C1orf43-203ENST00000368516 MAPK8IP3Q9UPT6 1336 aa21.25■□□□□ 0.99
C1orf43-203ENST00000368516 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
C1orf43-203ENST00000368516 RALBP1Q15311 655 aa21.24■□□□□ 0.99
C1orf43-203ENST00000368516 NFE2L2Q16236 605 aa21.24■□□□□ 0.99
C1orf43-203ENST00000368516 PRR5LQ6MZQ0 368 aa21.24■□□□□ 0.99
C1orf43-203ENST00000368516 NPHP1O15259 732 aa21.23■□□□□ 0.99
C1orf43-203ENST00000368516 CLEC4GQ6UXB4 293 aa21.23■□□□□ 0.99
C1orf43-203ENST00000368516 CNBD1Q8NA66 436 aa21.23■□□□□ 0.99
C1orf43-203ENST00000368516 ZNF652Q9Y2D9 606 aa21.23■□□□□ 0.99
C1orf43-203ENST00000368516 COL11A2P13942 1736 aaPredicted RBP21.23■□□□□ 0.99
C1orf43-203ENST00000368516 HSPA6P17066 643 aa21.22■□□□□ 0.99
C1orf43-203ENST00000368516 RGL2O15211 777 aa21.21■□□□□ 0.99
C1orf43-203ENST00000368516 ST5P78524 1137 aa21.21■□□□□ 0.99
C1orf43-203ENST00000368516 MIS18AQ9NYP9 233 aa21.21■□□□□ 0.99
C1orf43-203ENST00000368516 KDM2BQ8NHM5 1336 aa21.21■□□□□ 0.99
C1orf43-203ENST00000368516 NBPF26B4DH59 902 aa21.2■□□□□ 0.98
C1orf43-203ENST00000368516 RASSF7Q02833 373 aa21.2■□□□□ 0.98
C1orf43-203ENST00000368516 NBPF10Q6P3W6 841 aaKnown RBP21.2■□□□□ 0.98
C1orf43-203ENST00000368516 PIAS4Q8N2W9 510 aaPredicted RBP21.2■□□□□ 0.98
C1orf43-203ENST00000368516 NBPF15Q8N660 670 aa21.2■□□□□ 0.98
C1orf43-203ENST00000368516 ZNF622Q969S3 477 aaKnown RBP eCLIP21.2■□□□□ 0.98
C1orf43-203ENST00000368516 NMRK2Q9NPI5 230 aa21.2■□□□□ 0.98
C1orf43-203ENST00000368516 ZC3H4Q9UPT8 1303 aaKnown RBP21.2■□□□□ 0.98
C1orf43-203ENST00000368516 TNRC6CQ9HCJ0 1690 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms