RNA–Protein interactions for RNA: ENST00000368277.3

PMF1-202, Transcript of polyamine modulated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMF1, Length 1,068 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-202ENST00000368277 COL15A1P39059 1388 aa18.27■□□□□ 0.51
PMF1-202ENST00000368277 NPC1L1Q9UHC9 1359 aa18.27■□□□□ 0.51
PMF1-202ENST00000368277 CEP350Q5VT06 3117 aa18.27■□□□□ 0.51
PMF1-202ENST00000368277 DLG5Q8TDM6 1919 aa18.26■□□□□ 0.51
PMF1-202ENST00000368277 FCHSD2O94868 740 aa18.26■□□□□ 0.51
PMF1-202ENST00000368277 KCNA3P22001 575 aa18.26■□□□□ 0.51
PMF1-202ENST00000368277 CHRNA5P30532 468 aa18.26■□□□□ 0.51
PMF1-202ENST00000368277 POLRMTO00411 1230 aaKnown RBP18.25■□□□□ 0.51
PMF1-202ENST00000368277 ARHGAP27Q6ZUM4 889 aa18.25■□□□□ 0.51
PMF1-202ENST00000368277 COL11A2P13942 1736 aaPredicted RBP18.24■□□□□ 0.51
PMF1-202ENST00000368277 BCORQ6W2J9 1755 aa18.24■□□□□ 0.51
PMF1-202ENST00000368277 ZPR1O75312 459 aa18.23■□□□□ 0.51
PMF1-202ENST00000368277 CANXP27824 592 aaKnown RBP18.23■□□□□ 0.51
PMF1-202ENST00000368277 IL17REQ8NFR9 667 aa18.23■□□□□ 0.51
PMF1-202ENST00000368277 TM4SF1P30408 202 aa18.22■□□□□ 0.51
PMF1-202ENST00000368277 BCL2L12Q9HB09 334 aa18.22■□□□□ 0.51
PMF1-202ENST00000368277 CARMIL3Q8ND23 1372 aa18.21■□□□□ 0.51
PMF1-202ENST00000368277 KIF3CO14782 793 aa18.21■□□□□ 0.51
PMF1-202ENST00000368277 NFIXQ14938 502 aa18.21■□□□□ 0.51
PMF1-202ENST00000368277 PHACTR3Q96KR7 559 aa18.21■□□□□ 0.51
PMF1-202ENST00000368277 GNAT3A8MTJ3 354 aa18.2■□□□□ 0.5
PMF1-202ENST00000368277 KCNQ3O43525 872 aa18.2■□□□□ 0.5
PMF1-202ENST00000368277 PRKAR2BP31323 418 aa18.2■□□□□ 0.5
PMF1-202ENST00000368277 TTC5Q8N0Z6 440 aa18.2■□□□□ 0.5
PMF1-202ENST00000368277 ZNF496Q96IT1 587 aaPredicted RBP18.2■□□□□ 0.5
PMF1-202ENST00000368277 NARFQ9UHQ1 456 aa18.2■□□□□ 0.5
PMF1-202ENST00000368277 TIAM2Q8IVF5 1701 aa18.2■□□□□ 0.5
PMF1-202ENST00000368277 TEFQ10587 303 aa18.19■□□□□ 0.5
PMF1-202ENST00000368277 GAS2L2Q8NHY3 880 aa18.19■□□□□ 0.5
PMF1-202ENST00000368277 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
PMF1-202ENST00000368277 PIM2Q9P1W9 311 aa18.19■□□□□ 0.5
PMF1-202ENST00000368277 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
PMF1-202ENST00000368277 HEG1Q9ULI3 1381 aa18.18■□□□□ 0.5
PMF1-202ENST00000368277 BICDL1Q6ZP65 573 aa18.18■□□□□ 0.5
PMF1-202ENST00000368277 PPP2R1AP30153 589 aa18.17■□□□□ 0.5
PMF1-202ENST00000368277 DALRD3Q5D0E6 543 aaKnown RBP18.17■□□□□ 0.5
PMF1-202ENST00000368277 C9orf131Q5VYM1 1079 aa18.17■□□□□ 0.5
PMF1-202ENST00000368277 VSIG10Q8N0Z9 540 aa18.17■□□□□ 0.5
PMF1-202ENST00000368277 NMRK2Q9NPI5 230 aa18.17■□□□□ 0.5
PMF1-202ENST00000368277 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
PMF1-202ENST00000368277 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
PMF1-202ENST00000368277 CCDC24Q8N4L8 307 aa18.16■□□□□ 0.5
PMF1-202ENST00000368277 CEMIPQ8WUJ3 1361 aa18.16■□□□□ 0.5
PMF1-202ENST00000368277 TNRC6CQ9HCJ0 1690 aaKnown RBP18.15■□□□□ 0.5
PMF1-202ENST00000368277 LAMB4A4D0S4 1761 aa18.15■□□□□ 0.5
PMF1-202ENST00000368277 SERPINB2P05120 415 aa18.15■□□□□ 0.5
PMF1-202ENST00000368277 EIF5P55010 431 aaKnown RBP18.15■□□□□ 0.5
PMF1-202ENST00000368277 RASSF7Q02833 373 aa18.15■□□□□ 0.5
PMF1-202ENST00000368277 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
PMF1-202ENST00000368277 PRAMEF22A3QJZ6 481 aa18.14■□□□□ 0.49
PMF1-202ENST00000368277 A1BGP04217 495 aa18.14■□□□□ 0.49
PMF1-202ENST00000368277 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
PMF1-202ENST00000368277 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
PMF1-202ENST00000368277 TBC1D9BQ66K14 1250 aa18.14■□□□□ 0.49
PMF1-202ENST00000368277 MCM10Q7L590 875 aa18.14■□□□□ 0.49
PMF1-202ENST00000368277 TBC1D2BQ9UPU7 963 aa18.14■□□□□ 0.49
PMF1-202ENST00000368277 KDM3BQ7LBC6 1761 aa18.13■□□□□ 0.49
PMF1-202ENST00000368277 STARD3NLO95772 234 aa18.13■□□□□ 0.49
PMF1-202ENST00000368277 HSPA6P17066 643 aa18.13■□□□□ 0.49
PMF1-202ENST00000368277 DCTN1Q14203 1278 aa18.13■□□□□ 0.49
PMF1-202ENST00000368277 RNF181Q9P0P0 153 aa18.13■□□□□ 0.49
PMF1-202ENST00000368277 DICER1Q9UPY3 1922 aaKnown RBP18.13■□□□□ 0.49
PMF1-202ENST00000368277 WDR90Q96KV7 1748 aa18.12■□□□□ 0.49
PMF1-202ENST00000368277 ARFGEF2Q9Y6D5 1785 aa18.12■□□□□ 0.49
PMF1-202ENST00000368277 FER1L6Q2WGJ9 1857 aa18.12■□□□□ 0.49
PMF1-202ENST00000368277 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
PMF1-202ENST00000368277 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
PMF1-202ENST00000368277 SLX4Q8IY92 1834 aa18.12■□□□□ 0.49
PMF1-202ENST00000368277 PRELPP51888 382 aa18.11■□□□□ 0.49
PMF1-202ENST00000368277 C2CD5Q86YS7 1000 aa18.11■□□□□ 0.49
PMF1-202ENST00000368277 NUDCQ9Y266 331 aa18.09■□□□□ 0.49
PMF1-202ENST00000368277 USP16Q9Y5T5 823 aa18.09■□□□□ 0.49
PMF1-202ENST00000368277 A0A087WZG4 1122 aa18.08■□□□□ 0.48
PMF1-202ENST00000368277 ZNF219Q9P2Y4 722 aaPredicted RBP18.08■□□□□ 0.48
PMF1-202ENST00000368277 NUP98P52948 1817 aa18.07■□□□□ 0.48
PMF1-202ENST00000368277 CAMTA2O94983 1202 aa18.07■□□□□ 0.48
PMF1-202ENST00000368277 IL6STP40189 918 aaPredicted RBP18.07■□□□□ 0.48
PMF1-202ENST00000368277 PRR5LQ6MZQ0 368 aa18.07■□□□□ 0.48
PMF1-202ENST00000368277 TEX13AQ9BXU3 409 aaPredicted RBP18.06■□□□□ 0.48
PMF1-202ENST00000368277 DZIP3Q86Y13 1208 aaKnown RBP18.05■□□□□ 0.48
PMF1-202ENST00000368277 TTLL6Q8N841 843 aa18.05■□□□□ 0.48
PMF1-202ENST00000368277 RTF1Q92541 710 aaKnown RBP18.05■□□□□ 0.48
PMF1-202ENST00000368277 ZNF622Q969S3 477 aaKnown RBP eCLIP18.05■□□□□ 0.48
PMF1-202ENST00000368277 MIS18AQ9NYP9 233 aa18.05■□□□□ 0.48
PMF1-202ENST00000368277 H0YIN7 160 aa18.04■□□□□ 0.48
PMF1-202ENST00000368277 NFKBIEO00221 500 aa18.04■□□□□ 0.48
PMF1-202ENST00000368277 TOMM70O94826 608 aa18.04■□□□□ 0.48
PMF1-202ENST00000368277 RRAGCQ9HB90 399 aa18.04■□□□□ 0.48
PMF1-202ENST00000368277 HTRA3P83110 453 aa18.03■□□□□ 0.48
PMF1-202ENST00000368277 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
PMF1-202ENST00000368277 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
PMF1-202ENST00000368277 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
PMF1-202ENST00000368277 THUMPD2Q9BTF0 503 aaKnown RBP18.02■□□□□ 0.48
PMF1-202ENST00000368277 KDM2BQ8NHM5 1336 aa18.01■□□□□ 0.47
PMF1-202ENST00000368277 NPHP1O15259 732 aa18.01■□□□□ 0.47
PMF1-202ENST00000368277 C21orf2O43822 256 aa18.01■□□□□ 0.47
PMF1-202ENST00000368277 NPM2Q86SE8 214 aaKnown RBP18.01■□□□□ 0.47
PMF1-202ENST00000368277 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
PMF1-202ENST00000368277 CNBD1Q8NA66 436 aa18.01■□□□□ 0.47
PMF1-202ENST00000368277 SETDB2Q96T68 719 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 1552.5 ms