RNA–Protein interactions for RNA: ENST00000367309.1

PHLDA3-201, Transcript of pleckstrin homology like domain family A member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHLDA3, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDA3-201ENST00000367309 NLGN1Q8N2Q7 840 aa28.36■■■□□ 2.13
PHLDA3-201ENST00000367309 ZBTB1Q9Y2K1 713 aa28.36■■■□□ 2.13
PHLDA3-201ENST00000367309 GYS1P13807 737 aa28.35■■■□□ 2.13
PHLDA3-201ENST00000367309 RUNDC1Q96C34 613 aa28.35■■■□□ 2.13
PHLDA3-201ENST00000367309 RIPK4P57078 832 aa28.34■■■□□ 2.13
PHLDA3-201ENST00000367309 PNISRQ8TF01 805 aaKnown RBP28.34■■■□□ 2.13
PHLDA3-201ENST00000367309 CCDC146Q8IYE0 955 aa28.33■■■□□ 2.13
PHLDA3-201ENST00000367309 USP42Q9H9J4 1324 aaKnown RBP28.33■■■□□ 2.13
PHLDA3-201ENST00000367309 THUMPD2Q9BTF0 503 aaKnown RBP28.32■■■□□ 2.12
PHLDA3-201ENST00000367309 MMP10P09238 476 aa28.31■■■□□ 2.12
PHLDA3-201ENST00000367309 LMOD3Q0VAK6 560 aa28.31■■■□□ 2.12
PHLDA3-201ENST00000367309 CD2APQ9Y5K6 639 aa28.31■■■□□ 2.12
PHLDA3-201ENST00000367309 CHD4Q14839 1912 aa28.31■■■□□ 2.12
PHLDA3-201ENST00000367309 COL15A1P39059 1388 aa28.3■■■□□ 2.12
PHLDA3-201ENST00000367309 SNRPA1P09661 255 aaKnown RBP28.3■■■□□ 2.12
PHLDA3-201ENST00000367309 EIF5P55010 431 aaKnown RBP28.3■■■□□ 2.12
PHLDA3-201ENST00000367309 KLHL34Q8N239 644 aa28.3■■■□□ 2.12
PHLDA3-201ENST00000367309 MIS18AQ9NYP9 233 aa28.3■■■□□ 2.12
PHLDA3-201ENST00000367309 SRP68Q9UHB9 627 aaKnown RBP28.3■■■□□ 2.12
PHLDA3-201ENST00000367309 ANP32CO43423 234 aa28.29■■■□□ 2.12
PHLDA3-201ENST00000367309 CANXP27824 592 aaKnown RBP28.28■■■□□ 2.12
PHLDA3-201ENST00000367309 C1QTNF8P60827 252 aa28.28■■■□□ 2.12
PHLDA3-201ENST00000367309 NLGN2Q8NFZ4 835 aa28.28■■■□□ 2.12
PHLDA3-201ENST00000367309 KDM3BQ7LBC6 1761 aa28.27■■■□□ 2.12
PHLDA3-201ENST00000367309 NARFQ9UHQ1 456 aa28.27■■■□□ 2.12
PHLDA3-201ENST00000367309 USP16Q9Y5T5 823 aa28.27■■■□□ 2.12
PHLDA3-201ENST00000367309 ZPR1O75312 459 aa28.26■■■□□ 2.11
PHLDA3-201ENST00000367309 FKBP8Q14318 412 aa28.26■■■□□ 2.11
PHLDA3-201ENST00000367309 CCDC184Q52MB2 194 aa28.26■■■□□ 2.11
PHLDA3-201ENST00000367309 RRP7AQ9Y3A4 280 aaKnown RBP28.26■■■□□ 2.11
PHLDA3-201ENST00000367309 PRAMEF22A3QJZ6 481 aa28.25■■■□□ 2.11
PHLDA3-201ENST00000367309 A1BGP04217 495 aa28.25■■■□□ 2.11
PHLDA3-201ENST00000367309 IL6STP40189 918 aaPredicted RBP28.25■■■□□ 2.11
PHLDA3-201ENST00000367309 GPR162Q16538 588 aa28.25■■■□□ 2.11
PHLDA3-201ENST00000367309 BABAM1Q9NWV8 329 aa28.25■■■□□ 2.11
PHLDA3-201ENST00000367309 A0A087WZG4 1122 aa28.24■■■□□ 2.11
PHLDA3-201ENST00000367309 USPL1Q5W0Q7 1092 aa28.24■■■□□ 2.11
PHLDA3-201ENST00000367309 TRIM35Q9UPQ4 493 aa28.24■■■□□ 2.11
PHLDA3-201ENST00000367309 EIF4A1P60842 406 aaKnown RBP28.23■■■□□ 2.11
PHLDA3-201ENST00000367309 NEUROD2Q15784 382 aa28.23■■■□□ 2.11
PHLDA3-201ENST00000367309 SENP3-EIF4A1A0A087X0R7 540 aa28.22■■■□□ 2.11
PHLDA3-201ENST00000367309 TM4SF1P30408 202 aa28.21■■■□□ 2.11
PHLDA3-201ENST00000367309 PARP3Q9Y6F1 533 aa28.21■■■□□ 2.11
PHLDA3-201ENST00000367309 GIGYF1O75420 1035 aaPredicted RBP28.2■■■□□ 2.1
PHLDA3-201ENST00000367309 BCL2L12Q9HB09 334 aa28.2■■■□□ 2.1
PHLDA3-201ENST00000367309 TSPYL4Q9UJ04 414 aa28.19■■■□□ 2.1
PHLDA3-201ENST00000367309 DDR1Q08345 913 aa28.18■■■□□ 2.1
PHLDA3-201ENST00000367309 C10orf71Q711Q0 1435 aa28.18■■■□□ 2.1
PHLDA3-201ENST00000367309 KIF13BQ9NQT8 1826 aa28.17■■■□□ 2.1
PHLDA3-201ENST00000367309 APAF1O14727 1248 aa28.16■■■□□ 2.1
PHLDA3-201ENST00000367309 MRS2Q9HD23 443 aa28.16■■■□□ 2.1
PHLDA3-201ENST00000367309 LAMB4A4D0S4 1761 aa28.16■■■□□ 2.1
PHLDA3-201ENST00000367309 NBPF26B4DH59 902 aa28.15■■■□□ 2.1
PHLDA3-201ENST00000367309 POLRMTO00411 1230 aaKnown RBP28.15■■■□□ 2.1
PHLDA3-201ENST00000367309 CHL1O00533 1208 aa28.15■■■□□ 2.1
PHLDA3-201ENST00000367309 NBPF10Q6P3W6 841 aaKnown RBP28.15■■■□□ 2.1
PHLDA3-201ENST00000367309 NPM2Q86SE8 214 aaKnown RBP28.15■■■□□ 2.1
PHLDA3-201ENST00000367309 NBPF15Q8N660 670 aa28.15■■■□□ 2.1
PHLDA3-201ENST00000367309 NFIXQ14938 502 aa28.14■■■□□ 2.1
PHLDA3-201ENST00000367309 TBC1D2BQ9UPU7 963 aa28.14■■■□□ 2.1
PHLDA3-201ENST00000367309 ZNF330Q9Y3S2 320 aaPredicted RBP28.14■■■□□ 2.1
PHLDA3-201ENST00000367309 PIP4K2AP48426 406 aaPredicted RBP28.13■■■□□ 2.09
PHLDA3-201ENST00000367309 SCN7AQ01118 1682 aa28.13■■■□□ 2.09
PHLDA3-201ENST00000367309 CAMTA2O94983 1202 aa28.12■■■□□ 2.09
PHLDA3-201ENST00000367309 TGFB2P61812 414 aa28.12■■■□□ 2.09
PHLDA3-201ENST00000367309 DZIP3Q86Y13 1208 aaKnown RBP28.11■■■□□ 2.09
PHLDA3-201ENST00000367309 PXDNLA1KZ92 1463 aa28.1■■■□□ 2.09
PHLDA3-201ENST00000367309 GRIN3BO60391 1043 aa28.09■■■□□ 2.09
PHLDA3-201ENST00000367309 YBX3P16989 372 aaKnown RBP eCLIP28.09■■■□□ 2.09
PHLDA3-201ENST00000367309 KIAA1551Q9HCM1 1747 aa28.09■■■□□ 2.09
PHLDA3-201ENST00000367309 RGL2O15211 777 aa28.08■■■□□ 2.09
PHLDA3-201ENST00000367309 PELP1Q8IZL8 1130 aaKnown RBP28.08■■■□□ 2.09
PHLDA3-201ENST00000367309 CFAP44Q96MT7 982 aa28.08■■■□□ 2.09
PHLDA3-201ENST00000367309 ERBB4Q15303 1308 aa28.08■■■□□ 2.09
PHLDA3-201ENST00000367309 NRXN2Q9P2S2 1712 aa28.07■■■□□ 2.08
PHLDA3-201ENST00000367309 TBC1D9BQ66K14 1250 aa28.07■■■□□ 2.08
PHLDA3-201ENST00000367309 BCORQ6W2J9 1755 aa28.06■■■□□ 2.08
PHLDA3-201ENST00000367309 SERPINB2P05120 415 aa28.06■■■□□ 2.08
PHLDA3-201ENST00000367309 CLEC4GQ6UXB4 293 aa28.06■■■□□ 2.08
PHLDA3-201ENST00000367309 ZNF853P0CG23 659 aa28.05■■■□□ 2.08
PHLDA3-201ENST00000367309 CALD1Q05682 793 aaKnown RBP28.05■■■□□ 2.08
PHLDA3-201ENST00000367309 LAS1LQ9Y4W2 734 aaKnown RBP28.05■■■□□ 2.08
PHLDA3-201ENST00000367309 AFDNP55196 1824 aaKnown RBP28.04■■■□□ 2.08
PHLDA3-201ENST00000367309 NCBP3Q53F19 620 aaKnown RBP28.04■■■□□ 2.08
PHLDA3-201ENST00000367309 A0A0G2JLW4 131 aa28.03■■■□□ 2.08
PHLDA3-201ENST00000367309 BICDL1Q6ZP65 573 aa28.03■■■□□ 2.08
PHLDA3-201ENST00000367309 IFT57Q9NWB7 429 aa28.03■■■□□ 2.08
PHLDA3-201ENST00000367309 CARMIL3Q8ND23 1372 aa28.02■■■□□ 2.08
PHLDA3-201ENST00000367309 DPEP1P16444 411 aa28.02■■■□□ 2.08
PHLDA3-201ENST00000367309 CCDC27Q2M243 656 aa28.02■■■□□ 2.08
PHLDA3-201ENST00000367309 ZNF652Q9Y2D9 606 aa28.02■■■□□ 2.08
PHLDA3-201ENST00000367309 KCNA3P22001 575 aa28.01■■■□□ 2.07
PHLDA3-201ENST00000367309 N4BP2Q86UW6 1770 aaPredicted RBP28.01■■■□□ 2.07
PHLDA3-201ENST00000367309 GNAI1P63096 354 aa28■■■□□ 2.07
PHLDA3-201ENST00000367309 PDIA6Q15084 440 aa28■■■□□ 2.07
PHLDA3-201ENST00000367309 SETDB2Q96T68 719 aa28■■■□□ 2.07
PHLDA3-201ENST00000367309 MBIPQ9NS73 344 aa28■■■□□ 2.07
PHLDA3-201ENST00000367309 HOXB7P09629 217 aa27.99■■■□□ 2.07
PHLDA3-201ENST00000367309 EIF2S2P20042 333 aaKnown RBP27.99■■■□□ 2.07
PHLDA3-201ENST00000367309 KRT24Q2M2I5 525 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms